mRNA_H-elongata_contig8418.16032.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE) HSP 1 Score: 526 bits (1355), Expect = 3.850e-171 Identity = 291/568 (51.23%), Postives = 344/568 (60.56%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVGFLEVNSLTVGKAVASDTLFIHGSLTGGGGSMFKARAA-LDTSRAHEFVGKSVPMDKCTSACGSSTPRFH---AEETATVCDRSCLPG-ENGPRFGGLNCGAGDPEHLGENCRLCYNDAPKAREWESELSKRNANEDIGMA---------QEHVIMCDT-----------------------------------------------------------LLPPDTSACSSKCQRKVDTVCDESCGRDRYGDYNCNWRGYGENCRFCFHDREAALKADEVARRRGGRVIMCHTYEPPTXXXXXXXXXXXEENEEIREGDTEVVIRYAILGGRTRKHTEQANISCRRNSDDDSNAEPLTPEQEPFVDDITRGQLCAFMVGYPNFLQEMHVTAKSIAHFMPGMRIVIAVHADDASLYER 1494
+ENVYPKGPSVQFYK++LD+ VR QL EY LA++EWDVIVAH++SF KLY AAFGGVEPFW+KGSTLEGVNFHETVV+PESR VLGHINGNA+YNNTDPAFVEFV YTL RW+Y SYDVALWATI+D PYSWPLWQR+SRKFVA DLI+NVGF +++ V KAVAS+TLFIHGSLTGGGGSMF A A D+S A F+GK+ P ++CT++CG P A ATVCDRSC G E G RFGG CGAGD + G +CR C+ D +A+ E +L++ G + V+ D + CS+KCQ K DTVCD SCG RYGDYNC WRGYG +CRFCF+DRE AL A+ VA+RRGG VIMCHT+EPPT XXXXXXXXXX P P EP++ DITRGQ+CAFM G+ +FL+E VT KSI FMPGMR+ IA D S+++R
Sbjct: 199 EENVYPKGPSVQFYKLYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGERCTASCGGGAPPSSGVGAGALATVCDRSCYSGGELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEEQAAMRGRSFKMPVDNEKSRRVLRADDGPEGAAGWVEGGEGGDSRAVLRGNRGGGAGVTRRMDAVDGGTDDEMVEXXXXXXXXXXXXXXXPATGCSNKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDT---------PYDPANEPYLKDITRGQICAFMTGFSSFLKETEVTVKSIVQFMPGMRVAIATQDHDVSVFKR 757
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI) HSP 1 Score: 466 bits (1198), Expect = 1.440e-150 Identity = 244/540 (45.19%), Postives = 329/540 (60.93%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVGFLEVNSLTVGKAVASDTLFIHGSLTGGGGSMF----------------------KARAALDTSRAHEFVGKSVPMDK-----CTSACGSSTP-----------RFHAEETATVCDRS----CLPGENGPRFGGLNCGAGDPEHLGENCRLCYNDAPKAREWESELSK--RNANEDIGMAQEHVIMCDTLLPPDTSACSSKCQRKVDTVCDESCGRDRYGDYNCNWRGYGENCRFCFHDREAALKADEVARRRGGRVIMCHTYEPPTXXXXXXXXXXXEEN-EEIREGDTEVVIRYAILGGRTRKHTEQANISCRRNSDDDSNAEPLTPEQEPFVDDITRGQLCAFMVGYPNFLQEMHVTAKSIAHFMPGMRIVIAVHADDASLYER 1494
QENVYPKGPSVQFYK+FL+ ++E+L + +A++EWDV+VAH+ SF KLY+AAF VEPFWVKGS L G NFH TV + ++ +LGHINGNA+YNN+DPAF +FV++TL RW Y +SYDVALWAT++D PYSWPLWQR+S KFV+T+LI+NVGFL+V+ TVG A+AS+T+FIHGSLTGGGG+ F + A+L+ + A E VG P + C + CGS+ + ATVCD + G + G +CGAGD E G++CR CY DA +A + + L R A+E+ HVIMCDTL PP+ S CS KC K DT+CD+ C +G+YNCNWR +GE+CRFCF D AA+ AD+ A+R GGRVIMC+T+EPP +E E + E + A +T AN + D+ P+ P + D+ RG++CAF Y +L+E + +S+AHF+PGMR+ +AV S++ R
Sbjct: 28 QENVYPKGPSVQFYKLFLEDTIKEKLERFGAIAVIEWDVLVAHDKSFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIHGSLTGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSTRLATPECRTECGSTVSWDLLGGXXXXXXDGVMDMATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRPCYFDAEEALKADRVLQNQTREASEE---QPHHVIMCDTLRPPEASTCSLKCATKKDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNTHEPPVELTQAELDALEKERIEHVMEAAASKMANAAKQEKKTSNTKGHANPGGKTAGDEGEPDAPVHPAMIEYSKDLLRGEMCAFATAYYLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNR 564
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE) HSP 1 Score: 440 bits (1132), Expect = 7.280e-141 Identity = 241/575 (41.91%), Postives = 329/575 (57.22%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVGFLEVNSLTVGKAVASDTLFIHGSLTGGGGSMF----------------------KARAALDTSRAHEFVGKSVPM-----DKCTSACGSSTP---------RFHAEETATVCDRS----CLPGENGPRFGGLNCGAGDPEHLGENCRLCYNDAPKAREWESELSKRNANEDIGMAQ-EHVIMCDTLLPPDTSACSSKCQRKVDT------------------------VCDESCGRDRYGDYNCNWRGYG--------------ENCRFCFHDREAALKADEVARRRGGRVIMCHTYEPPTXXXXXXXXXXXEEN-EEIREGDTEVVIRYAILGGRTRKHTEQANISCRRNSDDDSNAEPLTPEQEPFVDDITRGQLCAFMVGYPNFLQEMHVTAKSIAHFMPGMRIVIAVHADDASLYER 1494
QENVYPKGPSVQFYK+FL+ +E+L + +A++EWDV VAH+ SF KLY+AAF VEPFWVKGS L G NFH T + ++ +LGHINGNA+YNN+DPAF +FV++TL RW Y +SYDVALWAT++D PYSWPLWQR+S KFV+T+LI+NVGFL+V+ T+G A+AS+T+FIHGSL+GGGG+ F + A+L+ + A E VG P +C + CGS+ + ATVCD + G + G +CGAGD E G++CR CY DA +A + + L +N ++G Q HVIMCDTL PP+ S CS KC K DT +CD+ C +G+YNCNWR +G E+CRFCF D AA+ ADE A+R GGRVIMC+T+EPP ++ E + E + A G +T AN + D+ P+ P + +++ RG++CAF Y +L+E + +S+AHF+PGMR+ +AV S++ R
Sbjct: 28 QENVYPKGPSVQFYKLFLEDTFKEKLERFGAIAIMEWDVRVAHDKSFEKLYIAAFDVVEPFWVKGSVLAGTNFHGTATITDNWRMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETLGNALASETMFIHGSLSGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSIRLATPECRTECGSTVSWDLLGGGGGEDGVMDIATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRSCYFDAEEALKADRIL--QNQAREVGEVQPRHVIMCDTLRPPEASTCSLKCALKKDTARTNSSMRPPEPHVNPVWLYVPPQICDDRCESGLFGNYNCNWRDHGALLWTQMILFTPAPEHCRFCFDDTAAAIVADETAKRMGGRVIMCNTHEPPVERTQAEMDALEKKRIEHVMEATASKMANAAKQGKKTSNTKGHANPGGKAAGDEGEPDAPVHPAMIEYSENLLRGEMCAFSTAYHLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNR 600
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE) HSP 1 Score: 427 bits (1099), Expect = 8.650e-134 Identity = 243/585 (41.54%), Postives = 315/585 (53.85%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVGFLEVNSLTVGKAVASDTLFIHGSLTGGGGSMFKARAALDTSRAHEFVGKSVPMDKCTSACGSSTPRFHA----EETATVCDRSCLPG-ENGPRFGGLNCGAGDPEHLGENCRLCYNDAPKA-----------------------------REWES-----------------ELSKRNANEDIG--------------------------------------MAQEHVIMCDTLLPPDT-SACSSKCQRKVDTVCDESCGRDRYGDYNCNWRGYGENCRFCFHDREAALKADEVARRRGGRVIMCHTYEPPTXXXXXXXXXXXEENEEIREGDTEVVIRYAILGGRTRKHTEQANISCRRNSDDDSNAEPLTPEQEPFVDDITRGQLCAFMVGYPNFLQEMHVTAKSIAHFMPGMRIVIAVHADDASLYER 1494
++N PK S+QFYK++LD+ +R Q A+Y LA++EW+VIVAH+ SF +LY AAFGGVEPFWVKGS L + HE VV E+R +GHINGNA+YNNTD FV++V +T+ RW+Y YD ALWATI+D PYSWPLWQR+SRKFV T+LI+NVG +V+ + AVA TLFIHG+ T GG SM VG + ++CT +CG P HA TATVCDRSC G +G RFGG CGAGD G +CR C+ D +A + W S E+ +++ +G Q HVIMCDTL+PP S CS +C D VCD SCG R+GDYNCNWRGYG+NCR+C++DR A+ A+ VAR+RGG V+MC+T+EPPT E+ + + D E +T + ++ A P EPFV I RGQ+CAF+ FL+E V+ KSI FMPGMR+ IA A+D SL++R
Sbjct: 169 KDNERPKMASIQFYKLYLDSTIRCQFADYDALAVMEWNVIVAHDRSFEELYTAAFGGVEPFWVKGSALVSGSSHEIVVHSENRTTVGHINGNAIYNNTDQTFVDYVNFTVTRWEYTLPYDEALWATISDFPYSWPLWQRFSRKFVTTNLIANVGVHDVDIRELLDAVAGGTLFIHGTPTDGGVSM---------------VGSNELAERCTVSCGFRFPNAHATMAPSGTATVCDRSCYAGGRDGARFGGHLCGAGDVATYGAHCRTCFTDLGEAEAAEDTLALQERLVLEREGDTRTGNVAFEKSWRSDEAAWTYGRGGEGWPQQEVGEQHVEGGVGGNRDNRERGAVGHQRQQGGVNIMEPKQDRDMNKVQPILEKQRHVIMCDTLMPPPAASGCSHQCHEMDDAVCDRSCGTGRHGDYNCNWRGYGKNCRYCYNDRLQAMAANVVARQRGGSVVMCNTFEPPTEDEDWESPVEAEKVRAMVKLDEEADADAQEKAPQTSMPAPLPHSFNTGSATLTDEATSSNPANEPFVTGIKRGQICAFLTSNTFFLKETQVSVKSIGQFMPGMRVAIATDANDVSLFKR 738
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 251 bits (641), Expect = 2.700e-69 Identity = 148/343 (43.15%), Postives = 191/343 (55.69%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVGFLEVNSLTVGKAVASDTLFIHGSLTGGGG-SMFKAR---AALDTSRAHEFVGKSVP-----------------------------------MDKCTSACGSSTPRFHAEETATVCDRSCLPGENGPR-FGGLNCGAGDPEHLGENCRLCYNDAPKAREWESELSKRNANEDIGMAQEHVIMCDTLLPPD 918
++++YP+GPSV FY MFLD VR L+ Y L+++EWDV+VA ++SF +LY AAF E FWVKGS LEG +FH E VLGHINGNA+YNN DPAFVE+V+YT RW YEH YDVALW TI+D PYSWPL+QRYS KFV T+LIS+VG+ VN TV AVA TLFIHGS G + ++A AA+D + + + + VP MD C T VCD +C + P +G L CGA + ++ G +CR CYND KAR+ ++ ++ IMC T +P D
Sbjct: 107 EDDIYPQGPSVMFYNMFLDESVRSSLSGYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAVAGKTLFIHGSSVDEGNVASYEATEGDAAVDVATSQRQLTEDVPKWQAQEKWRNTSXXXXXXXXXXKKQYEDSSDEEGCMDGCEYTSKDGT-------RGRVCDSNC----SSPNVYGTLGCGAKNGKY-GADCRACYNDDEKARKQDTPGNR-------------AIMCSTKMPVD 424
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 251 bits (640), Expect = 3.310e-69 Identity = 159/382 (41.62%), Postives = 193/382 (50.52%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVGFLEVNSLTVGKAVASDTLFIHGSLTGGGGSMFKARAALDTSRAHEFVGKSVPMDKCTSACGSSTPRFHAEETATVCDRSCLPGENGPRFGGLNCGAGDPEHLGENCRLCYNDAPKAREWESELSKRNANEDIGMAQEHVIMCDTLLPPDTSACSSKCQRKV-----DTVCDESCGR-DRYGDYNCNWRG--YGENCRFCFHDREAALKADEVARRRGGRVIMCHTYEP 1131
++++YPKGPSV FYKMFLD VR L+EY L++VEWDV+VA ++SF +LY AAF E FWVKGS LEG +FH + E VLGHINGNA+YNN DPAFVE+V+YT RW YEH YDVALW TI+D PYSWPL+QRYS KFV T+LIS VG+ V+ TV AVA TLFIHGS G ++ A T+ A V K K T STP++ +E R +D+ ACSS C+ VCD +C D YG CN + YGE CR CF+D + A K D R IMC T P
Sbjct: 106 EDDIYPKGPSVMFYKMFLDENVRSSLSEYDALSIVEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISYVGYEHVSHDTVSDAVAGKTLFIHGSSVEDG-NVASYEAVASTATATVDVAKQTRGRKLTG----STPKWKTQE---------------------------------KWRSSKDDSIXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXGACSSTCEYTSRDGTRGRVCDANCSTPDVYGTRGCNAKQGTYGEECRACFNDVDKARKQDTPENRS----IMCSTKRP 441
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 249 bits (635), Expect = 5.960e-69 Identity = 144/355 (40.56%), Postives = 193/355 (54.37%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVGFLEVNSLTVGKAVASDTLFIHGSLTGGGG-SMFKAR---AALDTSRAHEFVGKSVPMDK------------------------------------------------CTSACGSSTPRFHAEETATVCDRSCLPGENGPRFGGLNCGAGDPEHLGENCRLCYNDAPKAREWESELSKRNANEDIGMAQEHVIMCDTLLPPD 918
++++YP+GPSV FY MFLD +VR L+EY L+++EWDV+VA ++SF +LY AAF E FWVKGS LEG +FH E +LGHINGNA+YNN DPAFVE+V+YT RW YEH YDVALW TI+D PYSWPL+QRYS KFV T+LIS+VG+ VN TV A+A +TLFIHGS G + ++A A++D + + + VP K C + C ++ VCD +C + +G L CGA ++ G +CR CYND KAR+ ++ ++ IMC T +P D
Sbjct: 105 EDDIYPQGPSVMFYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWQLLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAIAGNTLFIHGSSVDEGNVASYEATEGDASVDVTATQRHLTEDVPKWKEQEKWKTSXXXXXXXXXXXXXETDDGVXXXXXXXXXXXXXXXSPDEEGCMNGCEYTSKDG---TRGRVCDSNCSRSD---AYGTLGCGAKSGKY-GADCRACYNDVEKARKQDTPANR-------------AIMCSTKMPVD 439
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: A0A6H5JL39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL39_9PHAE) HSP 1 Score: 229 bits (583), Expect = 4.950e-67 Identity = 135/356 (37.92%), Postives = 176/356 (49.44%), Query Frame = 1
Query: 457 ISNVGFLEVNSLTVGKAVASDTLFIHGSLTGGGGSMFKARAALDTSRAHEFVGKSVPMDKCTSACGSSTPRFHAEETATVCDRSCLP--GENGPRFGGLNCGAGDPEHLGENCRLCYNDAPKAREWESELSKRNANEDIGMAQEHVIMCDTLLPPDTSACSSKCQRKVDTVCDESCGRDRYGDYNCNWRGYGENCRFCFHDREAALKADEVARRRGGRVIMCHTYEPPTXXXXXXXXXXXEENEEIREGDTEVVIRYAILGGRTRKHTEQANISCRRNSDDDSNAEPLTPEQEPFVDDIT--------RGQLCAFMVGYPNFLQEMHVTAKSIAHFMPGMRIVIAVHADDASLYER 1494
ISN+GF ++N V KAV+ DTLFIHGS T GGS+ + H CT ACGS + +T+CD SC GPRFGG NCGAG+ G NCRLCY ++ +A ES L+ + D + HV+MC T PP +CS+ C+ +DTVCD CG YGD +CNWRG G+ CR CFHD AA ADE + +GGRVI+C+T EPP +E R GG + S N D P+ + + +DD RGQ+CAFM GY FL E + +S+ FMP MR+ + H D ++ R
Sbjct: 35 ISNIGFFDINDKHVEKAVSQDTLFIHGS-TLSGGSVVSSPVKHAPRPRHS-------SSNCTDACGSRPSSGSSAGISTICDESCSVEWSSTGPRFGGHNCGAGNASQYGSNCRLCYTNSEEASAEESILALSSV--DTSASDAHVVMCGTRNPPSGPSCSAGCEGTIDTVCDYRCGSGLYGDLHCNWRGLGKTCRLCFHDVSAAHLADEAVKAQGGRVILCNTLEPPLSIG------------------SEAEARRNKSGG------SRLAPSIPENHD------PIVSQTDGIIDDPVPTILSSSMRGQMCAFMRGYSEFLPETTSSVRSVLEFMPAMRVAVVTHPSDFHVFNR 350
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 239 bits (609), Expect = 4.330e-65 Identity = 117/192 (60.94%), Postives = 142/192 (73.96%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVGFLEVNSLTVGKAVASDTLFIHGS-LTGGGGSMFKARAA 582
++++YP+GPSV FY MFLD VR L+EY L+++EWDV+VA ++SF +LY AAF E FWVKGS LEG +FH T E VLGHINGNA+YNN DPAFVE+V+YT +RW YEH YDVALW TI+D PYSWPL+QRYS KFV T+LIS+VGF V V AVA TLFIHGS + G + F+A AA
Sbjct: 109 EDDIYPRGPSVMFYNMFLDESVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRSRWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGFEHVGHDMVSDAVAGQTLFIHGSSVEEGNVASFRAAAA 300
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Match: A0A6H5L131_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.750e-63 Identity = 176/508 (34.65%), Postives = 230/508 (45.28%), Query Frame = 1
Query: 10 QENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFNKLYLAAFGGVEPFWVKGSTLEGVNFHETVVMPESRFVLGHINGNALYNNTDPAFVEFVQYTLNRWQYEHSYDVALWATIADLPYSWPLWQRYSRKFVATDLISNVG-FLEVNSLTVGKAVASDTLFIHGSLTGGGGSM-FKARAALDTSRAHE--FVG-KSVPMDKCTSACGSSTPRFHAEETATVCDRSCLPGENGPRFGGLNCGAGDPEHLGENCRLCYNDAPKAREWESELSKRNANEDIGMAQEHVIMCDTLLPPDTSACSSKCQRKV-DTVCDESCGR-DRYGDYNCNWR--GYGENCRFCFHDREAALKADEVARRRGGRVIMCHTYEPPTXXXXXXXXXXXEENEEIREGDTEVVIRYAILGGRTRKHTEQANISCRRNSDDDSNAEPLTPEQE----PFVDDITRGQLCAFMVGYPNFLQEMHVTAKSIAHFMPGMRIVIAVHADDASLYER 1494
Q++VYPK PS+ FYKMFLD VR L+EY L+++E DV+VA ++SF +LY AAF E FWVKGS LEG +F + E VLGHINGNA+YNN DPAFVE+V+YT RW YEH YDVALW TI+D PYS PL+QRYS KFV T+L+ N + + G+ + + ++ ++ F A L + +VG + V D + A T H + A V S P + N G + + C T C VCD +C R D +G C + YG CR C++D + A K D G R IMC T P +NE D + I A+ G E+ S R D ++ +E PF D+ RG LCAF+ G + VT KSI FMPGMR+ IA A YER
Sbjct: 27 QDDVYPKAPSIMFYKMFLDESVRFSLSEYDALSIIEPDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFPSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSRPLYQRYSSKFVVTNLVGNYSRYTTMIRPQPGEGMRPNPPPLYWVSNNNSPTVDFSMPAPLHVRYVFKISYVGDEHVTQDTVSDAVAGKTLFIHGGDVADVITASA------------------PXXXXXXXXXXXXXXXXXXXXXXXXXRGNRRR--GNDGDETLKC-------TDGCKYTSNDGTRGRVCDANCSRRDVHGTLGCGTKDGAYGTECRACYNDGDEAHKQDTP----GNRAIMCSTVMPVDVRSLWLSI----DNE-----DYSLQIGQAMEG---EDGEEEVEGSFERVGVDGVREGVISFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYER 491 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8418.16032.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8418.16032.1 >prot_H-elongata_contig8418.16032.1 ID=prot_H-elongata_contig8418.16032.1|Name=mRNA_H-elongata_contig8418.16032.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=499bp VTFQENVYPKGPSVQFYKMFLDAEVREQLAEYQVLALVEWDVIVAHESSFback to top mRNA from alignment at H-elongata_contig8418:6173..9269+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8418.16032.1 ID=mRNA_H-elongata_contig8418.16032.1|Name=mRNA_H-elongata_contig8418.16032.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3097bp|location=Sequence derived from alignment at H-elongata_contig8418:6173..9269+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8418:6173..9269+ >mRNA_H-elongata_contig8418.16032.1 ID=mRNA_H-elongata_contig8418.16032.1|Name=mRNA_H-elongata_contig8418.16032.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2994bp|location=Sequence derived from alignment at H-elongata_contig8418:6173..9269+ (Himanthalia elongata Himel1 dioecious)back to top |