prot_H-elongata_contig84160.16030.1 (polypeptide) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE) HSP 1 Score: 139 bits (349), Expect = 2.510e-35 Identity = 72/143 (50.35%), Postives = 96/143 (67.13%), Query Frame = 0
Query: 1 MSLSRAAYWKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKAGVSLAKILKKSL 143
M L WK A KEI+SL++ VY++VP + VP ++G++WV K+K + T K+RLV +G QVPG GGTF VCRLQSIRM+ AIAAE ++ +DV+TAFL AD++E VFV+M PGYE N + L L+KSL
Sbjct: 309 MELPETKLWKAATDKEIKSLQDLKVYKLVPRTDVPLGHNVIGSKWVFKVKPENTHKARLVAKGWNQVPGRDCGGTFAPVCRLQSIRMVFAIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSL 451
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5KWT4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT4_9PHAE) HSP 1 Score: 132 bits (332), Expect = 2.500e-33 Identity = 70/136 (51.47%), Postives = 90/136 (66.18%), Query Frame = 0
Query: 9 WKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKAGVSLAKILKKSLY 144
W AA++EI SLK V+++VP + VP +K + ++WV K KADG+ K RLVVQG QVPG+ G TF VCRLQSIRM+ A + E+ +DV TAFL AD+ E VFV+ PG+E NK G L L+KSLY
Sbjct: 65 WNTAAEREIASLKERQVHKLVPRTAVPPGRKRIKSKWVFKRKADGSFKGRLVVQGWNQVPGLDYGSTFAPVCRLQSIRMLACTAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKNKDGGDLVMQLQKSLY 200
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5JIN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN1_9PHAE) HSP 1 Score: 129 bits (324), Expect = 6.650e-32 Identity = 68/136 (50.00%), Postives = 89/136 (65.44%), Query Frame = 0
Query: 9 WKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKAGVSLAKILKKSLY 144
W AA++EI SLK V+++VP + VP +K + +RWV K K DG+ K RLV QG QVPG+ G T+ VCRLQSIRM+ IA + E+ +DV TAFL AD+ E VFV+ PG+E +K G L L+KSLY
Sbjct: 851 WNAAAEREIASLKERQVFKLVPRTAVPPGRKRIKSRWVFKRKVDGSFKGRLVAQGWNQVPGLDCGSTYAPVCRLQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLY 986
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE) HSP 1 Score: 128 bits (321), Expect = 1.710e-31 Identity = 66/139 (47.48%), Postives = 89/139 (64.03%), Query Frame = 0
Query: 6 AAYWKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKAGVSLAKILKKSLY 144
A W AA++E++SL + VY++VP S VP +K + ++WV K KADGT K R+V QG QVPG+ G T+ VCR+QS+RM+ I E +DV TAFL AD+ EEVFV+ PG+E +K G + L KSLY
Sbjct: 1163 ATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLY 1301
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE) HSP 1 Score: 128 bits (321), Expect = 1.720e-31 Identity = 66/139 (47.48%), Postives = 89/139 (64.03%), Query Frame = 0
Query: 6 AAYWKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKAGVSLAKILKKSLY 144
A W AA++E++SL + VY++VP S VP +K + ++WV K KADGT K R+V QG QVPG+ G T+ VCR+QS+RM+ I E +DV TAFL AD+ EEVFV+ PG+E +K G + L KSLY
Sbjct: 1328 ATKWNAAAEREMKSLSDRKVYKLVPRSAVPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLY 1466
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5JVC8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC8_9PHAE) HSP 1 Score: 120 bits (302), Expect = 3.030e-31 Identity = 66/140 (47.14%), Postives = 92/140 (65.71%), Query Frame = 0
Query: 6 AAYWKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKA-GVSLAKILKKSLY 144
A WK A KE++SLK+H V ++VPI +P K +G+RW+ K+KA G K+RL VQG Q GI GGT+ V R S +++AIAAE G+ + +DV TAFL ++V+EEV+V+ GYE ++ G+ L LKKSLY
Sbjct: 6 ADQWKAAMDKEMRSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKATGVMKARLTVQGWGQRYGIDYGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYEITDEVTGLPLVMKLKKSLY 145
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5KL37_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL37_9PHAE) HSP 1 Score: 127 bits (318), Expect = 4.090e-31 Identity = 67/136 (49.26%), Postives = 88/136 (64.71%), Query Frame = 0
Query: 9 WKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKAGVSLAKILKKSLY 144
W AA++EI SLK VY++VP + VP +K + ++WV K KA G+ K RLV QG QVPG+ G T+ VCR QSIRM+ IA + E+ +DV TAFL AD+ E VFV+ PG+E +K G L L+KSLY
Sbjct: 474 WNAAAEREIASLKERQVYKLVPRTAVPPGRKRIKSKWVFKRKAGGSFKGRLVAQGWNQVPGLDCGNTYAPVCRFQSIRMLACIAVQFNLELDQMDVSTAFLYADILENVFVEQPPGFEVKDKDGGDLVMQLQKSLY 609
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE) HSP 1 Score: 124 bits (310), Expect = 4.160e-30 Identity = 64/131 (48.85%), Postives = 85/131 (64.89%), Query Frame = 0
Query: 14 KKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKAGVSLAKILKKSLY 144
K+E++SL N VY++VP S VP +K + ++WV K KADGT K R+V QG QVPG+ G T+ VCR+QS+RM+ I E +DV TAFL AD+ EEVFV+ PG+E +K G + L KSLY
Sbjct: 150 KREMKSLSNRKVYKLVPRSAVPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLY 280
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5KAG6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAG6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 9.350e-30 Identity = 63/145 (43.45%), Postives = 95/145 (65.52%), Query Frame = 0
Query: 1 MSLSRAAYWKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYERINKA-GVSLAKILKKSLY 144
M+ ++ W++A KE+ SL +H V +++P+S VP+ ++GTRWV ++K DG K+R+VVQG Q GI TF VC++ S R+++AIAA G+ + +DVQTAFLN + E+V+ PG+E+I + G L LKKSLY
Sbjct: 651 MNSPQSTEWEQAMLKELASLDDHDVADLIPVSSVPAGCSVIGTRWVYRVKTDGRFKARVVVQGWAQQHGIDCFTTFAPVCKIGSQRLLLAIAAAQGWPVIAMDVQTAFLNGKLSEDVYTYQAPGFEKIESSTGKPLVWKLKKSLY 795
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Match: A0A6H5JLX1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLX1_9PHAE) HSP 1 Score: 114 bits (284), Expect = 9.980e-30 Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 0
Query: 6 AAYWKEAAKKEIQSLKNHGVYEIVPISFVPSFQKIVGTRWVNKIKADGTCKSRLVVQGLPQVPGIKNGGTFTSVCRLQSIRMMVAIAAELGFEIYMIDVQTAFLNADVDEEVFVKMTPGYE 126
A WK A KE++SLK+H V ++VPI +P K +G+RW+ K+KA G K+RL+VQG Q GI GGT+ V R S +++AIAAE G+ + +DV TAFL ++V+EEV+V+ GYE
Sbjct: 3 ADQWKAAMDKEMRSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKATGVMKARLIVQGWGQRHGIDCGGTYAPVSRFSSQLVLMAIAAERGYVVETMDVVTAFLQSNVEEEVYVRQAKGYE 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84160.16030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig84160.16030.1 ID=prot_H-elongata_contig84160.16030.1|Name=mRNA_H-elongata_contig84160.16030.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bpback to top |