mRNA_H-elongata_contig84073.16018.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: A0A6H5JF67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF67_9PHAE) HSP 1 Score: 232 bits (592), Expect = 2.490e-74 Identity = 110/135 (81.48%), Postives = 124/135 (91.85%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAG 438
+IN G IGDVRTI + SRDPAPPPVAYL+NSGGIFMD TSHDFDMARFLVGDEI+EV+V+A AFDPEAKEA+DFDTA H+KFKNGAFG IENSRRCSFGYDQRVEVFGAGG I GANRSPQ+V+++N+DG+NAG
Sbjct: 78 KINEGTIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIDEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGAGGSISGANRSPQNVLVNNKDGLNAG 212
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: D7FTB5_ECTSI (Inositol 2-dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTB5_ECTSI) HSP 1 Score: 233 bits (593), Expect = 4.290e-73 Identity = 110/135 (81.48%), Postives = 124/135 (91.85%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAG 438
+IN G IGDVRTI + SRDPAPPPVAYL+NSGGIFMD TSHDFDMARFLVGDEI+EV+V+A AFDPEAKEA+DFDTA H+KFKNGAFG IENSRRCSFGYDQRVEVFGAGG I GANRSPQ+V+++N+DG+NAG
Sbjct: 186 KINEGTIGDVRTIHITSRDPAPPPVAYLQNSGGIFMDMTSHDFDMARFLVGDEIDEVFVTATAFDPEAKEADDFDTANTHLKFKNGAFGVIENSRRCSFGYDQRVEVFGAGGSISGANRSPQNVLVNNEDGLNAG 320
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: W7T7P4_9STRA (Myo-inositol 2-dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7P4_9STRA) HSP 1 Score: 179 bits (453), Expect = 6.650e-52 Identity = 87/135 (64.44%), Postives = 102/135 (75.56%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAG 438
QI G IG VRTIR+VSRDPAPPP YLK SGGIF+D +SHDFDMARFLVG +IEEV+V A+ PEA A D DT ++F+NG FG++ENSR CSFGYDQRVEVFG G +QG NRSP V S+ +G+ AG
Sbjct: 206 QIVQGAIGKVRTIRIVSRDPAPPPADYLKTSGGIFLDMSSHDFDMARFLVGSDIEEVFVQGTAWGPEAAGAGDLDTQITLLRFENGVFGTLENSRLCSFGYDQRVEVFGELGSLQGENRSPSTVTRSDAEGVTAG 340
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: Q9XEX0_GRAGA (Putative NAD-myo-inositol dehydrogenase (Fragment) n=1 Tax=Gracilaria gracilis TaxID=2777 RepID=Q9XEX0_GRAGA) HSP 1 Score: 172 bits (437), Expect = 9.650e-52 Identity = 78/135 (57.78%), Postives = 104/135 (77.04%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAG 438
Q+ +G IG +R + SRDPAPPP YL NSGGIF+D +SHD+DMARF+ G EIE VYV+A+AF+ AKEA D DTA +K +G+FG+I+NSRRCS+GYDQR+EVFG+ G + NR+P V++SN+ G++AG
Sbjct: 10 QVASGAIGQLRMFHITSRDPAPPPAQYLANSGGIFLDMSSHDWDMARFITGAEIESVYVTASAFEEAAKEANDVDTAITVLKMSDGSFGTIDNSRRCSYGYDQRIEVFGSKGSLNSNNRAPDTVVISNEHGLSAG 144
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: A0A7S2ZAH6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAH6_9RHOD) HSP 1 Score: 175 bits (444), Expect = 4.380e-51 Identity = 80/135 (59.26%), Postives = 102/135 (75.56%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAG 438
+I G IGDVR + SRDP+PPP YLK SGGIF+D SHDFDMARF+ EI+EV+V+ AF PEA EAEDFD+ ++ KNG+FG+IENSR C+FGYDQR+EVFG+ G + G NR P +V++SN +GI +G
Sbjct: 159 EILNGAIGDVRMFHITSRDPSPPPAEYLKKSGGIFLDMISHDFDMARFVSQSEIDEVFVTGKAFGPEAAEAEDFDSVVTMLRMKNGSFGTIENSRSCAFGYDQRIEVFGSKGTLTGNNRGPSEVVLSNSEGITSG 293
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: A0A7S1TMJ0_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TMJ0_9RHOD) HSP 1 Score: 173 bits (439), Expect = 2.280e-50 Identity = 81/134 (60.45%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINA 435
QI AG IG+VR ++VSRDPAPPP YL+ SGGIF+D SHDFDMARF+ G EIEEVYV AFDPEAK A D D+ +K NG FG+I+NSRRC+ GYDQR+EVFG+ G + G N++P V +SN GI +
Sbjct: 158 QIEAGTIGEVRMFQIVSRDPAPPPQEYLEKSGGIFLDMASHDFDMARFITGAEIEEVYVCGTAFDPEAKGANDLDSVITTLKMSNGTFGTIQNSRRCALGYDQRIEVFGSDGVLTGQNKAPNTVQLSNNKGIQS 291
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: M2X2D7_GALSU (Myo-inositol 2-dehydrogenase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X2D7_GALSU) HSP 1 Score: 174 bits (440), Expect = 8.470e-50 Identity = 79/140 (56.43%), Postives = 102/140 (72.86%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAGKLSPF 453
Q+ G IG++R + SRDPAPP YL NSGGIF+D TSHDFDMARF+ G EI++V+VS AFD EAK+A D DT +H++ KNG+ G+I+NSRRCS+GYDQR+EVFG+ G + G N SP VI SN G++ + F
Sbjct: 224 QVEDGSIGELRMFHIHSRDPAPPTAEYLANSGGIFLDMTSHDFDMARFITGSEIDQVFVSGNAFDDEAKQANDLDTVIIHLRMKNGSMGTIDNSRRCSYGYDQRIEVFGSKGSLLGNNISPNQVIWSNDQGLHQSRPHSF 363
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: A0A2V3J1X4_9FLOR (Putative oxidoreductase YrbE n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1X4_9FLOR) HSP 1 Score: 172 bits (437), Expect = 9.500e-50 Identity = 80/135 (59.26%), Postives = 102/135 (75.56%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAG 438
Q+ +G IG VR + SRDPAPPP YL SGGIF+D TSHD+DMARF+ G EIE VYV+ AAF+ AK+A+D DTA +K +G+FG+I+NSRRCS+GYDQR+EVFG+ G I NR+P V+ SN+ GI+AG
Sbjct: 183 QVASGAIGQVRMFHITSRDPAPPPAEYLAQSGGIFLDMTSHDWDMARFITGAEIESVYVTGAAFEDAAKQADDIDTAITVLKMSDGSFGTIDNSRRCSYGYDQRIEVFGSTGTINSNNRAPNTVVTSNEMGISAG 317
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: A0A5J4YNW9_PORPP (Putative oxidoreductase YrbE n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNW9_PORPP) HSP 1 Score: 170 bits (431), Expect = 5.770e-49 Identity = 79/135 (58.52%), Postives = 100/135 (74.07%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAG 438
QI AG IG VR ++VSRDPAPPP YL+ SGGIF+D SHDFDMARF+ G EI+EVYV AFDPEAK A D D+ + +K +G+FG+I+NSRRC+ GYDQR+EVFG G + G N++P V +S+ G+ AG
Sbjct: 178 QIEAGAIGPVRMFQIVSRDPAPPPQEYLEKSGGIFLDMASHDFDMARFVTGAEIDEVYVCGTAFDPEAKGANDLDSLIMTLKMSDGSFGTIQNSRRCALGYDQRIEVFGRDGILTGNNKAPNTVTLSSATGVQAG 312
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Match: A0A7J7ILE1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILE1_9RHOD) HSP 1 Score: 164 bits (414), Expect = 1.930e-46 Identity = 76/140 (54.29%), Postives = 96/140 (68.57%), Query Frame = 1
Query: 34 QINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTSHDFDMARFLVGDEIEEVYVSAAAFDPEAKEAEDFDTACVHIKFKNGAFGSIENSRRCSFGYDQRVEVFGAGGCIQGANRSPQDVIMSNQDGINAGKLSPF 453
QI G IG VR + SRDPAPPP YL SGGIF+D SHD+DMARF+ G EIE+VYV AFDPEA+ A D DT ++ GAFG+I+N+RRC++GYDQR+EVFGA G + G N+S V+ + +DG G+ F
Sbjct: 173 QIERGAIGQVRMFHIHSRDPAPPPAEYLAKSGGIFLDMCSHDYDMARFVTGQEIEQVYVVGKAFDPEAQAANDLDTQVTVLRMSGGAFGTIDNARRCAYGYDQRIEVFGAEGSLTGMNKSSHTVVAAGKDGYQLGRPYDF 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84073.16018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig84073.16018.1 >prot_H-elongata_contig84073.16018.1 ID=prot_H-elongata_contig84073.16018.1|Name=mRNA_H-elongata_contig84073.16018.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=153bp PSVQPLHRFCLQINAGGIGDVRTIRVVSRDPAPPPVAYLKNSGGIFMDQTback to top mRNA from alignment at H-elongata_contig84073:99..1322+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig84073.16018.1 ID=mRNA_H-elongata_contig84073.16018.1|Name=mRNA_H-elongata_contig84073.16018.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1224bp|location=Sequence derived from alignment at H-elongata_contig84073:99..1322+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig84073:99..1322+ >mRNA_H-elongata_contig84073.16018.1 ID=mRNA_H-elongata_contig84073.16018.1|Name=mRNA_H-elongata_contig84073.16018.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=918bp|location=Sequence derived from alignment at H-elongata_contig84073:99..1322+ (Himanthalia elongata Himel1 dioecious)back to top |