prot_H-elongata_contig84040.16014.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84040.16014.1
Unique Nameprot_H-elongata_contig84040.16014.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
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BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5JRS6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRS6_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 6.650e-24
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct:   48 VENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIP 150
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.370e-22
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ + + FDV ST   P
Sbjct:  634 VENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIP 736
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.930e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct:  127 VENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVQSTSRIP 229
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 2.410e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct:  191 VENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIP 293
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.650e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct: 1303 VENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIP 1405
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 3.560e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct:  904 VENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIP 1006
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 3.560e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct: 1013 VENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIP 1115
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 3.610e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct: 1283 VENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIP 1385
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 3.620e-22
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:    1 MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            + +  EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct: 1446 VENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIP 1548
[Close]
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 4.680e-22
Identity = 48/99 (48.48%), Postives = 66/99 (66.67%), Query Frame = 0 
Query:    5 MEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVLNEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTFDFP 103
            +EQCK DPCVF K  D  VV+I+V++VDD+ VAG++++  +L A LN+ F T N+GE   F GC + +DVE   L ISQT +I+ +   FDV ST   P
Sbjct:  419 VEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIP 517
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84040.16014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRS6_9PHAE6.650e-2446.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JBN2_9PHAE1.370e-2246.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVD4_9PHAE1.930e-2246.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTL3_9PHAE2.410e-2246.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JN00_9PHAE2.650e-2246.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG8_9PHAE3.560e-2246.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE3.560e-2246.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.610e-2246.60Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE3.620e-2246.60Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K274_9PHAE4.680e-2248.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84040contigH-elongata_contig84040:1763..2290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84040.16014.1mRNA_H-elongata_contig84040.16014.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84040 1577..2749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84040.16014.1 ID=prot_H-elongata_contig84040.16014.1|Name=mRNA_H-elongata_contig84040.16014.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MRHDMEQCKTDPCVFGKFRDCKVVLILVVHVDDMAVAGTEDEVSQLYAVL
NEDFTTNNIGELSLFTGCVMAQDVEKDYLTISQTPFIEPLARSFDVTSTF
DFPVVRHWKAVLNFLKYLLCSK*
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