prot_H-elongata_contig84021.16012.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig84021.16012.1
Unique Nameprot_H-elongata_contig84021.16012.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length324
Homology
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 2.990e-12
Identity = 55/135 (40.74%), Postives = 69/135 (51.11%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWA------FDGPAMETRRAKKLRST--RVPILRAKTVRWELPASSLAH-SNDALSNLEYMCF---MCKTANDWKEVVWPSGLKKIIL-HWKGSRVDDV 125
            W  ST+QLQL S++FCVACRSV  LHL V   TPR++WA       D            RS   RVP  R + V W LP S L+  S DA  NLE M F   + ++ + +  V  P GLK ++   W    VD V
Sbjct:   13 WYISTVQLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLVRVPPFRPREVTWNLPPSMLSEASKDAFKNLECMSFSDAVERSGDSFDGVALPRGLKSVVFGRWCYQHVDKV 147          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5KMU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU8_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.100e-11
Identity = 42/110 (38.18%), Postives = 52/110 (47.27%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWAFDGPAMETRRAKKLRSTRVPILRAKTVRWELPASSLAHSNDALSNLEYMCFMCKTANDWKEVVWPSGLKKI 113
            W  S LQLQL SLQ C+ACR V   HL V R     +W          R   L  +RVP LR + V W L   S+ H  DA  +++ + F          V WP GLKK+
Sbjct:   32 WYTSKLQLQLASLQLCLACRRVPTSHLTVERDVLALLWPHSAAEATRSRLVSLGQSRVPALRPRKVTWNLATLSMRHCGDAFESVDVLVFGDSFDYRVDRVTWPPGLKKL 141          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.460e-11
Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWAFDGPAMETR-----RAKKLRSTRVPILRAKTVRWELPASSLAHSNDALSNLEYMCFMCKTANDWKEVVWPSGLKKIIL 115
            W  ST QLQL SL FCVACRSV  +HL V+R TP  +++ D  A   R      +K++ + RVP LRA+ V W+L   +   +   LS++E         +   E VW  G++ + L
Sbjct:   47 WYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQLSGETPRCTGVGLSSVELFVLGDAVNDSMDEAVWSDGMRSLSL 163          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.290e-10
Identity = 47/115 (40.87%), Postives = 64/115 (55.65%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWAF-DGPAMETRRAKKLRSTRVPILRAKTVRWELP-ASSLAHSNDALSNLEYMCFMCKTANDWKEVVWPSGLKKIILH 116
            W  ST +LQL SL+FC+ACR+ + LHL V+ R PR + A  DGP       K+L   RVP LRA+ V W +P A+ L     AL +L+++ F        + V WP  L+ I  H
Sbjct:   53 WYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHP---KRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFH 164          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 2.710e-10
Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWA-FDGPAMETRRAKKLRSTRVPILRAKTVRWELP-ASSLAHSNDALSNLEYMCFMCKTANDWKEVVWPSGLKKII 114
            W  ST +LQL SL+FC+ACR  ++L L V+ +TPR + A  D P   T+R  +   TRVP LRA+ V+W +P A+ L     AL ++  + F        + VVWP  LK+II
Sbjct:   34 WYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCR---TRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQII 143          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 5.390e-10
Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWAF-DGPAMETRRAKKLRSTRVPILRAKTVRWELP-ASSLAHSNDALSNLEYMCFMCKTANDWKEVVWPSGLKKIILH 116
            W  ST +LQL SL FC+ACR+ + +HLNV+ + PR + A  D P       K+L  TRVP LR++ V W +P A+ L     A++++EY+ F     +  + V WP  L+ +  H
Sbjct:   68 WYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHP---KRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFH 179          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 5.300e-9
Identity = 45/112 (40.18%), Postives = 61/112 (54.46%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWAF-DGPAMETRRAKKLRSTRVPILRAKTVRWELP-ASSLAHSNDALSNLEYMCFMCKTANDWKEVVWPSGLKKI 113
            W  ST +LQL SL+ C+ACR  + LHL V+  TPR + A  D P+      K+L  TRVP LRA+   W +P AS +  S  A  +++Y+ F          +VWP  LK I
Sbjct:  153 WYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHP---KRLCGTRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTI 261          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 5.590e-8
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWAF-DGPAMETRRAKKLR-STRVPILRAKTVRWELPASSLAHSNDA-----LSNLEYMCFMCKTANDWKEVVWPSGLKKIILH 116
            W ASTL+LQL SL  C ACR+  +LH++V+ +TPR +W+          R+  L  S+RVP++RA  + W L   +L              LE +   C ++    EVVWP GL +++L+
Sbjct:   30 WYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLG-SEVVWPRGLTQLVLY 148          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.070e-6
Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMW--AFDGPAMETRRAKKLRSTRVPILRAKTVRWELPASSLAHSNDALSNLEYMCFMCKT---ANDWKEVVWPSGLKKII 114
            W  STL+LQLVSL+ C ACR V+ LH+ V  +TP  +W  + +      R  K   S+RVP+++A  + W LP   L   +         C    T   A   +  VWP  LK+++
Sbjct:   28 WYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMV 143          
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 3.150e-6
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    4 WCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWA-FDGPAMETRRAKKLR-STRVPILRAKTVRWELPASSLAHSN 82
            W ASTL+LQLVSL+FC ACR V  LH+ V+R+TPR +W+     A   +R+++   S RVP ++A  + W L    L  ++
Sbjct:   36 WYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTS 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig84021.16012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JG83_9PHAE2.990e-1240.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMU8_9PHAE3.100e-1138.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFC0_9PHAE3.460e-1137.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZZ4_9PHAE1.290e-1040.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK5_9PHAE2.710e-1041.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRF9_9PHAE5.390e-1038.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPY7_9PHAE5.300e-940.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LIJ3_9PHAE5.590e-835.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNI6_9PHAE1.070e-634.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLV1_9PHAE3.150e-643.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 127..299
e-value: 4.0E-6
score: 27.5
IPR008615FNIPPFAMPF05725FNIPcoord: 161..202
e-value: 5.8E-6
score: 26.4
coord: 249..290
e-value: 1.3E-5
score: 25.3
coord: 205..246
e-value: 2.2E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 125..227
NoneNo IPR availablePANTHERPTHR32134:SF134FNIP REPEAT-CONTAINING PROTEIN DDB_G0274063/DDB_G0272642coord: 125..227
coord: 167..271
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 167..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..323
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.611
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 55..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig84021contigH-elongata_contig84021:616..1587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig84021.16012.1mRNA_H-elongata_contig84021.16012.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig84021 556..2222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig84021.16012.1 ID=prot_H-elongata_contig84021.16012.1|Name=mRNA_H-elongata_contig84021.16012.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MEWWCASTLQLQLVSLQFCVACRSVRLLHLNVNRRTPRYMWAFDGPAMET
RRAKKLRSTRVPILRAKTVRWELPASSLAHSNDALSNLEYMCFMCKTAND
WKEVVWPSGLKKIILHWKGSRVDDVRWPASLETLVFDWFFNEPIDGVVWP
ALQCLRPVGLFNHPIDRVVWPVTLRSLTLSTAFNQPIDRVAWPKSLERLS
FGGAFNQALDQVVWPESLTQLTFGSTFNQPIALVAWPASLKELEFGRRFN
QPIHEVSWPESLEEITFGSNFTWPIGEVMWPPSLKRVTLGLMCSLSTGGI
VWPVSIEGMTWGSWYEFVDWNGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP