prot_H-elongata_contig8398.16010.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8398.16010.1
Unique Nameprot_H-elongata_contig8398.16010.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length206
Homology
BLAST of mRNA_H-elongata_contig8398.16010.1 vs. uniprot
Match: A0A6H5KS52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS52_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.220e-64
Identity = 128/186 (68.82%), Postives = 142/186 (76.34%), Query Frame = 0
Query:   13 MANDLRRISTLQTELGAFTSLVTLRRPRGRACWNVLREGLSTLEGHLQGDHQSMYSDRSRKGFLPPGSGGGKKXXXXXXXRKSAARTLPRLLHRARRLSELLGVPWASVVRHLANEAASRGMVPEAVGLCNMLFRDKAAMDERAAALALRDTAKALSTFVANQALSGTLRMDGLAGDRAKTAVFQA 198
            MA+DLRR+S LQTE GAFTSL TL RPRGRACWN +REGL TLE +L GD+++     +              XXXXXX RK+ A  LPRLLHRARRLSELLGV W SVV HLANEAA+RG VPEAVGLC+MLFRD+A  DERAAALALRDTAKALSTFVANQA  G LR D L G+RA+TAV QA
Sbjct:    1 MASDLRRVSALQTEFGAFTSLKTLSRPRGRACWNTMREGLVTLEEYLHGDNETRGKKTAAAAXXXXXXXXXXXXXXXXXARKATASALPRLLHRARRLSELLGVAWTSVVSHLANEAATRGKVPEAVGLCHMLFRDQATTDERAAALALRDTAKALSTFVANQAHMGALRADDLEGERARTAVLQA 186          
BLAST of mRNA_H-elongata_contig8398.16010.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 7.640e-64
Identity = 134/213 (62.91%), Postives = 150/213 (70.42%), Query Frame = 0
Query:    2 GDSAVSDDLDTMANDLRRISTLQTELGAFTSLVTLRRPRGRACWNVLREGLSTLEGHLQGDHQSMYSDRSRKGFLPPGSGGGKKXXXXXXX----------------RKSAARTLPRLLHRARRLSELLGVPWASVVRHLANEAASRGMVPEAVGLCNMLFRDKAAMDERAAALALRDTAKALSTFVANQALSGTLRMDGLAGDRAKTAVFQA 198
            GD     +L TMA+DLRR+S LQTE GAFTSL TL  PRGRACWN +REGL TLE +L GD+++        G +P     GKK   XXXX                RK+ A  LPRLLHRARRLSELLGV W SVV HLANEAA+RG VP+AVGLC+MLFRD+AA DERAAALALRDTAKALSTFVANQA  G LR D L G+RA+TAV QA
Sbjct: 1402 GDWEKLGNLATMASDLRRVSALQTEFGAFTSLKTLNNPRGRACWNTMREGLVTLEEYLHGDNKA--------GSVPSAGSKGKKTAAXXXXXXXXXXXXXXXXXXXXRKATASALPRLLHRARRLSELLGVAWTSVVSHLANEAATRGKVPQAVGLCHMLFRDQAATDERAAALALRDTAKALSTFVANQAHMGALRADDLEGERARTAVLQA 1606          
BLAST of mRNA_H-elongata_contig8398.16010.1 vs. uniprot
Match: A0A835ZDW9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW9_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 4.300e-11
Identity = 59/154 (38.31%), Postives = 75/154 (48.70%), Query Frame = 0
Query:   19 RISTLQTELGAFTSLVTLRRPRGRACWNVLREGLSTLEGHLQGDHQSMYSDRSRKGFLPPGSGGGKKXXXXXXXRKSAARTLPRLLHRARRLSELLGVPWASVVRHLANEAASRGMVPEAVGLCNMLFRDKAAMDERAAALALRDTAKALSTFV 172
            R   LQ E G F S+ TL R R    W +LR  L+  E   +G   S                   K         + AR+L   L  ARRL ELLGV W+ +VRHLA+EA   G V EA+ LC+   ++    D+  AALALR+TA ALS +V
Sbjct: 1045 RARALQVEFGLFPSVRTLSR-RADLAWAMLRARLAAAELCWRGSTGSSXXXXXXXXXXXAALPAPAKRWEV-----APARSLGAQLVGARRLGELLGVKWSRIVRHLAHEATLAGRVQEALDLCSGNLKEG---DDSDAALALRETAVALSAYV 1189          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8398.16010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KS52_9PHAE2.220e-6468.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSU3_ECTSI7.640e-6462.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZDW9_9STRA4.300e-1138.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8398contigH-elongata_contig8398:190..1788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8398.16010.1mRNA_H-elongata_contig8398.16010.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8398 178..1788 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8398.16010.1 ID=prot_H-elongata_contig8398.16010.1|Name=mRNA_H-elongata_contig8398.16010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
MGDSAVSDDLDTMANDLRRISTLQTELGAFTSLVTLRRPRGRACWNVLRE
GLSTLEGHLQGDHQSMYSDRSRKGFLPPGSGGGKKGGVKGNTRKSAARTL
PRLLHRARRLSELLGVPWASVVRHLANEAASRGMVPEAVGLCNMLFRDKA
AMDERAAALALRDTAKALSTFVANQALSGTLRMDGLAGDRAKTAVFQARE
GCLAD*
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