prot_H-elongata_contig8385.16000.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8385.16000.1
Unique Nameprot_H-elongata_contig8385.16000.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length193
Homology
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 1.670e-92
Identity = 138/193 (71.50%), Postives = 156/193 (80.83%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQ PVQHEMP+ET+LEK GAKDA I+TGGK+KERFTLCLAV  D  KVPL  IFKGTP  PP++PGKGK TQ RK SIA E+   NR+K G+P  GMSFGVQE SWCD REC LWI  S  LRPNNGS++ Q P ILVLDDFKCH+D+ FIA+L++  NT VI IPGGLTPLLQPLDR+LNK+MKRLLRG Y
Sbjct:   58 MDQTPVQHEMPVETSLEKTGAKDARIATGGKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMY 250          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 1.110e-89
Identity = 142/193 (73.58%), Postives = 154/193 (79.79%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQ PVQHEMP+ETTLEK GAKDA ISTGGK+KERFTL LAVMADG KV   IIFKGTPF PP   GKGK T  RK S+A E+   NR K  HPA GMSFGVQE SW D REC  WIS S +LRPNNGSI+ Q P ILVLDDFKCH+DE +IA L++  NT VI+IPGGLTPLLQPLDR+LNKQMKRLLRGKY
Sbjct:  120 MDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKY 312          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 3.520e-88
Identity = 141/193 (73.06%), Postives = 152/193 (78.76%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQ PVQHE+P+ETTLEK GAKDA ISTGGK+KERFTL LAVMADG KV   IIFKGTPF PP   GKGK T  RK S+A E+   NR K GHPA GMSFGVQE SW D REC  WIS S +LRPNNGSI+ Q P ILVLDDFKCH+DE FIA L++  NT VI IPG LTPLLQPLDR+LNKQMKRLLR KY
Sbjct:  120 MDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKY 312          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 3.220e-87
Identity = 137/193 (70.98%), Postives = 149/193 (77.20%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQ PVQHEMP+ETTLEK GAKDA ISTGGK++ERF L LAVMADG KV   I FKGTPF PP   GKGK T  RK S+A E+   NR K GHPA G+SFGVQE SW D REC  WIS   +LRPNNGSI+ Q P ILVLDDFK H+DE FIA L++  NT VI IPGGLTPLLQPLD +LNKQMKRLLRGKY
Sbjct:    1 MDQTPVQHEMPVETTLEKTGAKDARISTGGKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKY 193          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 1.830e-86
Identity = 138/193 (71.50%), Postives = 150/193 (77.72%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQ PVQHEMP+ETTLEK GAKDA +STGG++KERFTL LAV ADG KV L IIF GTPF PP   GKGK T  RK S+A E+   NR K GHPA GMSFGVQE SW D REC  W S S +LRPNNGSI+ Q P ILVLDDFKCH+DE FIA L++  NT VI IPGGLTPLLQPLDR+LNKQ KRLLR KY
Sbjct:   54 MDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKY 246          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 2.760e-86
Identity = 141/191 (73.82%), Postives = 159/191 (83.25%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRG 191
            MDQ PVQ EMP+ETTLEKRG KDA ISTGGK+K+RFT CLAVMADG KVP  IIFKG PF PP+  G+ K TQ RKG IAAEV L NRTKFG+P +GM F VQE SWCDARECTLW+SES R RPN+GS+I Q   ILVLDDF+CHR E+F+ DLR+  NT+VILIPGGLTPLLQPLDR+LNK+MKRL+RG
Sbjct:  189 MDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRG 379          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 2.590e-85
Identity = 142/193 (73.58%), Postives = 154/193 (79.79%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQ PVQHEMP+ETTLE  GAKDA I+TGGK+KERFTLCLAV ADG KVPL IIFKGTPF PP  PGKGK TQ RK SIA EV   NR+K G P  GMSFGVQE SWCD REC LWI +S +LRPNNGSI+ Q   ILVLDDFKCH+D+ FIA L++  NT VI IPGGL PL QPLDR+LNKQMKRLLRG Y
Sbjct:  274 MDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMY 466          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 1.120e-83
Identity = 142/219 (64.84%), Postives = 157/219 (71.69%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTG--------------------------GKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQ PVQ+EMP+ETTLEK GAKDA I+TG                          GK+KERFTLCLAV ADG+KVPL IIFKGTPF PP  PGKGK TQ RK SIA EV   NR+K G P  GMSFGVQE SWCD RE  LWI +S +LRPNNGS++ Q   ILVLDDFKCH+D+ FIA L++  NT VI IPGGLTPLLQPLDR+LNKQMKRLLRG Y
Sbjct:  207 MDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMY 425          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 1.130e-83
Identity = 140/194 (72.16%), Postives = 152/194 (78.35%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGG-KKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQMPVQHEMP+ETTL+K GAKDA ISTGG  +KERFTL LAV ADG KV   IIF+GTPF PP   GKGK T+ RK  +A E+   NR K GHPA GMSFGVQE SW D REC  WIS S +LRPNNGSI+ Q P ILVLDDFKCH DE FIA L++  NT VI IPGGLTPLLQPLDR+LNKQMKRLLRGKY
Sbjct:  314 MDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKY 507          
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 3.970e-83
Identity = 140/201 (69.65%), Postives = 149/201 (74.13%), Query Frame = 0
Query:    1 MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVPLCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSFGVQENSWCDARECTLWISESLRL--------RPNNGSIITQHPIILVLDDFKCHRDEAFIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY 193
            MDQ PVQHEMP+ETTLE  G KDA ISTGGK+KERFTL LAVMADG  V  CIIFKGTPF PP   GKGK T  RK S+A EV   NR K GHPA GMSFGVQE SW   +EC  WI  S +L        RPNNGSI+ Q P ILVLDDFKCH+DE FIA L +  NT VI IPGGLTPLLQPLDR+LNKQMKRLLRGKY
Sbjct:  274 MDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKY 474          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8385.16000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXD3_ECTSI1.670e-9271.50DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE1.110e-8973.58DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE3.520e-8873.06DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KT06_9PHAE3.220e-8770.98DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE1.830e-8671.50DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE2.760e-8673.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K8Y4_9PHAE2.590e-8573.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE45_9PHAE1.120e-8364.84DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.130e-8372.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE3.970e-8369.65DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 33..191
e-value: 2.1E-11
score: 43.8
NoneNo IPR availablePANTHERPTHR19303TRANSPOSONcoord: 89..193
coord: 2..66
NoneNo IPR availablePANTHERPTHR19303:SF23POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAINcoord: 89..193
NoneNo IPR availablePANTHERPTHR19303:SF23POGO TRANSPOSABLE ELEMENT WITH KRAB DOMAINcoord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8385contigH-elongata_contig8385:7427..8263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8385.16000.1mRNA_H-elongata_contig8385.16000.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8385 7256..8263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8385.16000.1 ID=prot_H-elongata_contig8385.16000.1|Name=mRNA_H-elongata_contig8385.16000.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=193bp
MDQMPVQHEMPMETTLEKRGAKDALISTGGKKKERFTLCLAVMADGSKVP
LCIIFKGTPFNPPNKPGKGKRTQRRKGSIAAEVDLGNRTKFGHPAAGMSF
GVQENSWCDARECTLWISESLRLRPNNGSIITQHPIILVLDDFKCHRDEA
FIADLRKGCNTSVILIPGGLTPLLQPLDRILNKQMKRLLRGKY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom