mRNA_H-elongata_contig83695.15994.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A0A096P8I2_OSTTA (Oxoglutarate/iron-dependent dioxygenase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P8I2_OSTTA) HSP 1 Score: 137 bits (346), Expect = 3.050e-36 Identity = 79/197 (40.10%), Postives = 109/197 (55.33%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTSSKDSFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGDKDHHRVSVVLEQYRVPLLAYSLTIEY 621
F KT+GFV+KFN EGV++ + +P A FDR R P ANA+V+N+L+C + E LSV H+D T+G S+ ++ AH V+VLY SVP M GG LE+Y Y T D PD V P ENM+++FRGD H+V+ +R + + RVS+VLEQY++ AY T+ Y
Sbjct: 117 FSKTRGFVVKFNLEGVEKFRTNPDYACFTPIFDRLRLPDANAFVMNILLCQLGDYDAYNADE--------LSVGIHLDTTVGIYSRHTYAAHQVSVLYNSVPSDMEGGELEVYEYG---------------TGHPDVSKDPDEKVRPKENMMVTFRGDAYHQVRSYRTKSGAE--RVSLVLEQYKIDKAAYGKTMRY 288
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A0A454XPC7_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XPC7_OSTTA) HSP 1 Score: 136 bits (343), Expect = 1.200e-35 Identity = 79/197 (40.10%), Postives = 113/197 (57.36%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTSSKDSFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGDKDHHRVSVVLEQYRVPLLAYSLTIEY 621
F KT+GFV+KFN +GV+R + A D FDR R P NA+V+NVL+C Q+ + ++V H+D+T+G SK F+AH V+VLYVSVPE M GG+LE++ Y + + V P +A V+P EN++ +FRGD HRV+ +R R ++ RVS+VLEQY + Y TI +
Sbjct: 131 FGKTRGFVLKFNEDGVERFRSKKEYACFVDVFDRLRAPLTNAFVMNVLLCELQDYSAYDANG--------MAVGLHLDDTVGIFSKHEFVAHQVSVLYVSVPEDMEGGQLELFPYG--------------NGSTPENVEPTEA-VEPKENLMATFRGDAFHRVRAYRTRSKRE--RVSLVLEQYHIGDNHYPKTITF 302
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A4S818_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S818_OSTLU) HSP 1 Score: 132 bits (332), Expect = 8.940e-35 Identity = 80/197 (40.61%), Postives = 108/197 (54.82%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTSSKDSFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGDKDHHRVSVVLEQYRVPLLAYSLTIEY 621
F KT+GFV+KFN EGVD+ K P A FD R P ANA+V+N+L+C + E LSV H+D T+G S+ F+AH V+VLY SVP M+GG LE LFPY + T P+ + P ENML++FRGD H+V+ ++ R + RVS+VLEQY + AY T+ +
Sbjct: 59 FSKTRGFVVKFNLEGVDKFKASPDYECFASVFDELRLPDANAFVMNILLCELGDYDAYNAEE--------LSVGLHLDTTVGIYSRHMFIAHQVSVLYNSVPNDMVGGELE----------LFPYGDGYPDTGAA-----PEKKIRPKENMLVNFRGDAFHQVRSYKTRSGSE--RVSLVLEQYVIDDDAYGKTMRF 230
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A0A7R9T418_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T418_9CHLO) HSP 1 Score: 132 bits (332), Expect = 4.540e-34 Identity = 80/197 (40.61%), Postives = 108/197 (54.82%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTSSKDSFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGDKDHHRVSVVLEQYRVPLLAYSLTIEY 621
F KT+GFV+KFN EGVD+ K P A FD R P ANA+V+N+L+C + E LSV H+D T+G S+ F+AH V+VLY SVP M+GG LE LFPY + T P+ + P ENML++FRGD H+V+ ++ R + RVS+VLEQY + AY T+ +
Sbjct: 127 FSKTRGFVVKFNLEGVDKFKASPDYECFASVFDELRLPDANAFVMNILLCELGDYDAYNAEE--------LSVGLHLDTTVGIYSRHMFIAHQVSVLYNSVPNDMVGGELE----------LFPYGDGYPDTGAA-----PEKKIRPKENMLVNFRGDAFHQVRSYKTRSGSE--RVSLVLEQYVIDDDAYGKTMRF 298
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A0A5J4YPS6_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPS6_PORPP) HSP 1 Score: 130 bits (326), Expect = 3.280e-33 Identity = 81/201 (40.30%), Postives = 110/201 (54.73%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTSSKD-SFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGD---KDHHRVSVVLEQYRVPLLAYSLTIEY 621
F+ T GF +KFN +GV + K DPA+A + YF+RA NAWV+NVLVC EE Q +SV H+D T+G F+AHVV+VLYVS+P M GG L +++Y + P + S D + P EN +SFRGD H V+GF+I D +D R+S+V+EQY++P L Y T Y
Sbjct: 121 FKGTYGFAVKFNNDGVQQFKDDPAMACLVPYFERAVRNDTNAWVVNVLVC-----------EETQ---AEVSVGIHVDNTVGIHVPVLRFLAHVVDVLYVSIPRDMQGGSLVIWNYGSGPSIVAPTIDS------------ADREIVPRENHRVSFRGDAFHTVRGFQIPEDVPKQDRLRISLVIEQYKIPSLFYRRTDTY 295
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A0A7S1XAZ5_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1XAZ5_9CHLO) HSP 1 Score: 129 bits (323), Expect = 4.110e-33 Identity = 69/186 (37.10%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTSSKDSFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRI--RGDKDHHRVSVVLEQY 582
F T+GF++K N +G+ + D L + +FD AR ANAWV+N+L+C E + ++V H+D+T+G +S +AH VNVLY SVP+ M+GG LE++SY+ +E L + +++G +PPD + P EN +++FRGD+ H+V+G++ RG R+S+V+EQY
Sbjct: 82 FGNTRGFLVKMNEDGLTDFRSDERLTCLTRFFDSARLTEANAWVMNLLICDSTEYSRRN-----------VAVGLHLDDTIGINSIWKHLAHQVNVLYASVPDDMVGGELEVWSYNHTQEAL-----QWDDLSEVNGTVPPDELITPVENTMVAFRGDSWHQVRGYKAPHRG----LRISLVMEQY 247
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A0A7S0WM43_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WM43_9CHLO) HSP 1 Score: 125 bits (313), Expect = 2.960e-31 Identity = 77/197 (39.09%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTSSKDSFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGDKDHHRVSVVLEQYRVPLLAYSLTIEY 621
F KT+GFV+KFN EGVD K A + FD R P ANA+V+N+L+C + E LSV H+D T+G S+ F+AH V+VLY SVP M GG LE++ Y +L G P + + P EN L++FRGD H+VK + R K+ RVS+VLEQY++ Y T+ +
Sbjct: 128 FSKTRGFVVKFNTEGVDEFKAKEEYACFREVFDDIRLPDANAFVMNILLCELGDYDQYNADE--------LSVGLHLDTTVGIYSRHMFIAHQVSVLYASVPNDMRGGALEVFPYGDGDPRL--------------GATPEEV-IAPKENTLVTFRGDAFHQVKSYSTRTGKE--RVSLVLEQYKIDDEMYPKTLRF 299
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: K8F644_9CHLO (Unnamed protein product n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F644_9CHLO) HSP 1 Score: 103 bits (257), Expect = 6.880e-23 Identity = 69/190 (36.32%), Postives = 98/190 (51.58%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALA-AMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTS---SKDSFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGDKDHHRVSVVLEQYRV 588
F KT+GFV+KFN+EGVD P D F++ R P NA+V N L+C E+ + + Q SV H+D+T+G + F+AH VNVLYV V M GG LE + Y +Q D +L P + P +N L+ FRGD+ H+VK + + R+S+VLEQY++
Sbjct: 148 FSKTRGFVVKFNKEGVDSFLNHPDYGDCYGDLFEKMRLPETNAYVFNALLC---ELSDYDDWKNNQT-----SVGLHLDQTVGLQGLKADHQFLAHQVNVLYVDVAADMKGGELEGWRYG------------SGDLKQSD-LLKPHLSIKPEKNKLVMFRGDSFHQVKAYHT-SESTTKRLSLVLEQYKI 315
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A0A2V3IFC1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC1_9FLOR) HSP 1 Score: 93.2 bits (230), Expect = 3.180e-19 Identity = 65/199 (32.66%), Postives = 97/199 (48.74%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDET--LGTSSKDSFMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQLDGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGDKDHHRVSVVLEQYRVPLLAYSLTIEY 621
F T+GF++ FN G++++++ + + YF R R P NAWVLN++ ++P D L++ H D+ L + M + NVLYV VPE M GG+LE + Y P I + G A V P EN + FRGD H+V+ ++ KD R S+VLEQY +P L +E+
Sbjct: 122 FNGTRGFLLSFNENGIEKMEKHDMFSCLKSYFRRYRLPNTNAWVLNMVWA---DIP---------DYERELTIQRHTDDAIMLNYTGSKKIMPYQTNVLYVFVPEDMQGGQLEAWDYD-----AHPATI-------MHGA---QASVTPVENRMAFFRGDAQHQVRSYKAPM-KDTLRASLVLEQYDIPEEYRDLVLEW 292
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Match: A0A5J4Z2V2_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2V2_PORPP) HSP 1 Score: 94.0 bits (232), Expect = 4.560e-19 Identity = 70/195 (35.90%), Postives = 101/195 (51.79%), Query Frame = 1
Query: 31 FQKTKGFVIKFNREGVDRLKQDP-----ALAAMADYFDRAREPFANAWVLNVLVCLPQEMPLKGESEEPQDLLLPLSVSPHIDETLGTSSKDS-FMAHVVNVLYVSVPERMLGGRLEMYSYSWLREKLFPYLISFLSTRQL--DGVLPPDAGVDPAENMLLSFRGDTIHRVKGFRIRGDKDHHRVSVVLEQYRVP 591
F+ T+GFVIKF+ G+ + + + + + +FD+AR+ AN +V+NVLV + P SE L V H+D TL S ++ F+AH V VLY+SVP M GG LE+ L TR+ +G + + P +N FRGD H+V+G+ + D RVS+VLEQYRVP
Sbjct: 209 FKYTRGFVIKFSDLGIPKFRAETLFNCGSFNPLLPFFDKARDIRANGFVMNVLVA---DKP-NNASE--------LVVGRHVDNTLKHSRPNTDFLAHTVTVLYLSVPPDMEGGELEV-----------------LGTREQYEEGGGTVKSRITPVQNKGARFRGDAYHQVRGYTT--ETDQRRVSLVLEQYRVP 372 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83695.15994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig83695.15994.1 >prot_H-elongata_contig83695.15994.1 ID=prot_H-elongata_contig83695.15994.1|Name=mRNA_H-elongata_contig83695.15994.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp MSVFVLFICFFQKTKGFVIKFNREGVDRLKQDPALAAMADYFDRAREPFAback to top mRNA from alignment at H-elongata_contig83695:104..1116+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig83695.15994.1 ID=mRNA_H-elongata_contig83695.15994.1|Name=mRNA_H-elongata_contig83695.15994.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1013bp|location=Sequence derived from alignment at H-elongata_contig83695:104..1116+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig83695:104..1116+ >mRNA_H-elongata_contig83695.15994.1 ID=mRNA_H-elongata_contig83695.15994.1|Name=mRNA_H-elongata_contig83695.15994.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1242bp|location=Sequence derived from alignment at H-elongata_contig83695:104..1116+ (Himanthalia elongata Himel1 dioecious)back to top |