prot_H-elongata_contig8364.15988.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8364.15988.1
Unique Nameprot_H-elongata_contig8364.15988.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length332
Homology
BLAST of mRNA_H-elongata_contig8364.15988.1 vs. uniprot
Match: D8LPV0_ECTSI (Acyl-CoA-binding domain-containing protein 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV0_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 1.340e-98
Identity = 193/344 (56.10%), Postives = 229/344 (66.57%), Query Frame = 0
Query:    1 RTAKDYAYISVNGCHRGMGDSGSYTVSCTHERMKALTRTGLERYNAEMARIALEQELHAKAVALQAKVDIGKAQLAKRREREDAVARSLARKAENRRLKSSTGASRSRRKWELRMQDSRVLETRGEWEQRRDGGGSVFYHCFSKDSLVEPFSWDHPEFWEEAVVNAAVAETVSSVENVSGAVGDGQPNGEL-------------SSLRAVGVAQNPNVEDSSNMTSSRALLAA-RTYTDEEKVSMAVTRLAENERLLGALAWRLGIPLRDVRRDGREPRLARDSNAQSEEIDKNRGQIELEDFDDMSDGEGERGDASEPPGVLPQDHSDVRRINLAERRRRKEV 330
            RTAKDYAY+S N  HRG  D GSY+VSC HERM AL RTGLERYNAEMAR+A+E+E  AK  ALQAKV+IGKA+LA RR REDA  RSLARK + + LK S GA RSR KWELRMQDS ++ETRG WEQR+D GGSVFY C S++ L EPFSWD PE W E+  +    E  ++                              SSLR +G   + +    +N        A  R  T+EE++S+AVTRLA NE+LL ALAWRLGIPL DVR DGREP LARD     EE+D+NR QIEL + DD SD EGERGD  E PG LPQDH+D+RR+ +AERRR+ + 
Sbjct: 1388 RTAKDYAYVSANDQHRGPSDPGSYSVSCKHERMAALLRTGLERYNAEMARVAVERERQAKDAALQAKVEIGKARLADRRAREDAATRSLARKTDAQHLKISAGADRSRHKWELRMQDSHIVETRGSWEQRKDLGGSVFYFCKSEEGLPEPFSWDPPECWGESDPSVLALEGAAAAXXXXXXXXXXXXXXXXXXXXXXXXAEQLSSSLRTLGFDPDQSGGGYTNNGGGHDGDATPRQLTEEEQLSLAVTRLAGNEKLLEALAWRLGIPLADVRPDGREPPLARDDQEDEEELDENREQIELGEHDDASDSEGERGDTRESPGPLPQDHTDLRRMRVAERRRKAQA 1731          
BLAST of mRNA_H-elongata_contig8364.15988.1 vs. uniprot
Match: A0A6H5KAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT0_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 6.930e-95
Identity = 190/339 (56.05%), Postives = 225/339 (66.37%), Query Frame = 0
Query:    1 RTAKDYAYISVNGCHRGMGDSGSYTVSCTHERMKALTRTGLERYNAEMARIALEQELHAKAVALQAKVDIGKAQLAKRREREDAVARSLARKAENRRLKSSTGASRSRRKWELRMQDSRVLETRGEWEQRRDGGGSVFYHCFSKDSLVEPFSWDHPEFWEEAVVNAAVAETVSSVENVSGAVGDGQPNGELSSLRAVGVAQNPNVEDSSNMTSSRAL---------LAARTYTDEEKVSMAVTRLAENERLLGALAWRLGIPLRDVRRDGREPRLARDSNAQSEEIDKNRGQIELEDFDDMSDGEGERGDASEPPGVLPQDHSDVRRINLAERRRRKEV 330
            RTAKDYAY+S N  HRG  D GSY+VSC HERM AL RTGLERYNAEMAR+A+E+E  AK  ALQAKV+IGKA+LA RR REDA  RSLARK + + LK S GA RSR KWELRMQDS V+E+RG WEQR+D GGSVFY C S++ L EPF WD   F+    V       ++S   + G    G           +GV  +P V   SN                   R  T+EE++S+AVTRLA NE+LL ALAWRLGIPL DVR DGREP LARD     EE+D+NR QIEL + DD SD EGE+GD  E PG LPQDH+D+RR+ +AERRR+ + 
Sbjct: 1209 RTAKDYAYVSANDQHRGPSDPGSYSVSCKHERMAALLRTGLERYNAEMARVAVERERQAKDAALQAKVEIGKAKLADRRAREDAATRSLARKTDAQHLKISAGADRSRHKWELRMQDSHVVESRGPWEQRKDLGGSVFYFCKSEEGLPEPFRWD---FYIRTCV-------IASTSVLCGRDRTG-----------LGVVLHPKVLSRSNCGGGGYTNNGGGHVGDATPRQLTEEEQLSLAVTRLAGNEKLLEALAWRLGIPLADVRPDGREPPLARDDQEDEEELDENREQIELGEHDDASDSEGEQGDTRESPGPLPQDHADLRRMRVAERRRKAQA 1526          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8364.15988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPV0_ECTSI1.340e-9856.10Acyl-CoA-binding domain-containing protein 6 n=1 T... [more]
A0A6H5KAT0_9PHAE6.930e-9556.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8364contigH-elongata_contig8364:1850..4793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8364.15988.1mRNA_H-elongata_contig8364.15988.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8364 1850..4793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8364.15988.1 ID=prot_H-elongata_contig8364.15988.1|Name=mRNA_H-elongata_contig8364.15988.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=332bp
RTAKDYAYISVNGCHRGMGDSGSYTVSCTHERMKALTRTGLERYNAEMAR
IALEQELHAKAVALQAKVDIGKAQLAKRREREDAVARSLARKAENRRLKS
STGASRSRRKWELRMQDSRVLETRGEWEQRRDGGGSVFYHCFSKDSLVEP
FSWDHPEFWEEAVVNAAVAETVSSVENVSGAVGDGQPNGELSSLRAVGVA
QNPNVEDSSNMTSSRALLAARTYTDEEKVSMAVTRLAENERLLGALAWRL
GIPLRDVRRDGREPRLARDSNAQSEEIDKNRGQIELEDFDDMSDGEGERG
DASEPPGVLPQDHSDVRRINLAERRRRKEVL*
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