mRNA_H-elongata_contig83590.15987.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: A0A6P6NIE5_CARAU (zinc finger BED domain-containing protein 4-like n=2 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6NIE5_CARAU) HSP 1 Score: 90.9 bits (224), Expect = 3.230e-17 Identity = 76/271 (28.04%), Postives = 130/271 (47.97%), Query Frame = 1
Query: 58 KAYMGVTAHFI--SEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQ-----------------------EWHG--------------CAAHKIELALRPVLEEPSI-KQTLAKHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLACATRWNSHLTQAKVILENKLQVL--LALETANSAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFIT-NSMMPMLCDALDVHL 741
+ ++GVT H + SEG + +ACN F G+HT ERI+ ++ +Y+I + + D AAN+K+A T P++ EW C AH ++L + L++ I T AK +K+++ +H S+ ++ E K + G IP A TRWNS L Q K +L Q L +A +T +S + ++ ++W + ++L+PFAEA + QG+ +T +S++P + +L+ HL
Sbjct: 166 RGFLGVTGHVLATSEG-VQLKSYLLACNRFKGTHTGERISEAFDSICDEYDIRQKLDFVICDNAANMKRAFTVCFPKEQDGEVTDDDNLDDAELWEDLSRGEWETVDRMINRGSPKRQQCFAHTLQLTVGDGLKDARIMNSTFAKCSKLSSLLHTSSTFKDAFED--KFGQRG----IPAAVNTRWNSTLRQVKAVLSFSHQELCSVAQDTGHS-----ELVFSIREWNLMKELCDVLQPFAEATDLTQGEKIVTVSSVLPCVL-SLNHHL 423
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: A0A673CRU7_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CRU7_9TELE) HSP 1 Score: 90.5 bits (223), Expect = 4.050e-17 Identity = 71/254 (27.95%), Postives = 112/254 (44.09%), Query Frame = 1
Query: 94 EGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQ-------------------------------------QEWHGCAAHKIELALRPVLEEPSIKQT-LAKHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLACATRWNSHLTQAKVILENKLQVLLALETANSAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFITNSMMPMLCDALDVHL 741
EG + +ACN F GSHT ERI E + ++Y+I+ ++ I D AAN++KA + PQ Q C AH ++L + L++ I LAK K++ +H+ST ++ E +S IP + TRWNS L Q K +L+ L A+ + + +T ++W +V +LEPFAEA + QG+ +T S + +L+ HL
Sbjct: 159 EGGIVLKSALLACNRFSGSHTGERICEEFEQICEEYQIKRKLLHIIRDNAANMRKAFSTSFPQHGDQEDDEDEGVEDDNLWTDLPVEDQERVDLFLQAKSQTRQQCFAHTLQLVVGDGLKDTKIANAALAKACKLSNLLHSSTSFKDIFEREFGQS------GIPSSVVTRWNSTLRQLKAVLKCDATKLTAILQESGHKET---AFTLREWSQIQELVRVLEPFAEATDLTQGEKVVTISAVVPCVLSLNHHL 403
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: UPI001955DB65 (zinc finger BED domain-containing protein 4-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955DB65) HSP 1 Score: 89.4 bits (220), Expect = 1.090e-16 Identity = 74/271 (27.31%), Postives = 130/271 (47.97%), Query Frame = 1
Query: 58 KAYMGVTAHFI--SEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQ-----------------------EWHG--------------CAAHKIELALRPVLEEPSI-KQTLAKHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLACATRWNSHLTQAKVILENKLQVLLAL--ETANSAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFIT-NSMMPMLCDALDVHL 741
+ ++GVT H + SEG + +ACN F GSHT ERI+ ++ +Y+I + + D AAN+K+A T P++ EW C AH ++L + L++ I T AK +K+++ +H S+ ++ E+ K + G IP T+WNS L Q K +L Q L ++ +T +S + ++ ++W + ++L+PFAEA + QG+ +T +S++P + +L+ HL
Sbjct: 165 RGFLGVTGHVLATSEG-VQLKSYLLACNRFKGSHTGERISEAFDSICDEYDIRQKLDFVICDNAANMKRAFTVCFPKEQDGEVTDDDILDDAELWEDLSRGEWETVDHMINRRIPKRQQCFAHTLQLTVGDGLKDARIMNSTFAKCSKLSSLLHTSSTFKDAFEA--KFGQRG----IPATVNTQWNSTLRQVKAVLSFTHQELCSVVQDTGHS-----ELVFSIREWNQMKELCDVLQPFAEATDLTQGEKIVTVSSVLPCVL-SLNHHL 422
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: UPI001C03A597 (zinc finger BED domain-containing protein 4-like isoform X1 n=2 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C03A597) HSP 1 Score: 86.3 bits (212), Expect = 1.250e-15 Identity = 68/253 (26.88%), Postives = 110/253 (43.48%), Query Frame = 1
Query: 97 GSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQ-------------------------------------QEWHGCAAHKIELALRPVLEEPSIKQT-LAKHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLACATRWNSHLTQAKVILENKLQVLLALETANSAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFITNSMMPMLCDALDVHL 741
G + +AC F GSHT ERI E + ++Y+I+ ++ I D AAN++KA + PQ Q C AH ++L + L++ I LAK K++ +H+ST ++ E +S IP + TRWNS L Q K +L+ L A+ + + +T ++W +V +LEPFA+A + QG+ +T S + +L+ HL
Sbjct: 197 GGIVLKSALLACKRFSGSHTGERICEEFEQICEEYQIKRKLLHIICDNAANMRKAFSTCFPQHGDEEDDDDEGVEDDNLWTDLPVEDQERVDLFLQAKSQTRQQCFAHTLQLVVGDGLKDTKIANAALAKACKLSNLLHSSTSFKDIFEREFGQS------GIPSSVVTRWNSTLRQLKAVLKCDSTKLTAILQESGHKET---AFTSREWSQIQELVRVLEPFAQATDLTQGEKVVTISAVVPCVLSLNHHL 440
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: UPI0018D0C22E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0C22E) HSP 1 Score: 84.7 bits (208), Expect = 4.170e-15 Identity = 62/225 (27.56%), Postives = 116/225 (51.56%), Query Frame = 1
Query: 52 SQKAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMK-QYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIELALRPVLEEPSIKQTLA-KHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLACATRWNSHLTQAKVILENKLQVLLALETANSAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFITNS-MMPML 717
S K+YM +T HFI E T++ E +HT+E +A E+ +++ ++ I ++ +TTD AANIKKA +L Q+ H CAAH + L ++ L++ + + K ++ T+ S KL+ +Q++ + K + TRWNS +LE +V + L A ++ G ++WI + +L+P + +++ G+ + T S ++P++
Sbjct: 201 SSKSYMTLTIHFIHENK--FKTLTLSTREVKDAHTSENLAREMKDILETEWNILDKIICVTTDNAANIKKAVIDIL-QKRHHSCAAHTLNLVVQDTLKDNELLIRMTDKCREIVTYFKRSNNAAYKLKEVQEQMQLEPLK-LKQDVQTRWNS----VYYMLERLDKVKIPLSAAITSLPGCPDNLNAEEWIEVHECLSILKPVEQMTSIISGEQYPTLSCIIPLI 417
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: A0A3N0XIJ1_ANAGA (Zinc finger BED domain-containing protein 4 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XIJ1_ANAGA) HSP 1 Score: 83.2 bits (204), Expect = 1.190e-14 Identity = 73/269 (27.14%), Postives = 124/269 (46.10%), Query Frame = 1
Query: 58 KAYMGVTAHFI--SEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQ-----------------------EWHG--------------CAAHKIELALRPVLEEPSI-KQTLAKHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLACATRWNSHLTQAKVILENKLQVLLALETANSAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFIT-NSMMPMLCDALDVHL 741
+ ++GVT H + SEG + +ACN F G+HT ERI+ ++ +Y I I D AAN+K+A T P++ EW C AH ++L + L++ I T AK +K+++ +H S+ ++ E K + G I A TRWNS L Q K +L Q L ++ + + ++ ++W + ++L+PFAEA + QG+ +T +S++P + +L+ HL
Sbjct: 2 RGFLGVTGHVLATSEG-VQLKSYLLACNRFKGTHTGERISEAFDSICDEYVIRQKRDFIICDNAANMKRAITVCFPKEQDGEVTDDDNLDDAELWEDLSRAEWETVDRMINRGSPKRQQCFAHTLQLTVGDGLKDARIMNSTFAKCSKLSSLLHTSSTFKDAFED--KFGQRG----IAAAVNTRWNSTLRQVKAVLSFSHQELCSVVQGTGHSE---LVFSIREWNLMEELCDVLQPFAEATDLTQGEKIVTVSSVLPCVL-SLNHHL 259
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: UPI001BB192EE (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB192EE) HSP 1 Score: 82.0 bits (201), Expect = 3.370e-14 Identity = 73/249 (29.32%), Postives = 112/249 (44.98%), Query Frame = 1
Query: 34 TSPCLTS--QKAYMGVTAHFISEG--SADITRCT-----IACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIELALRPVLEE-PSIKQTLAKHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLACATRWNSHLTQAKVILENKLQVLLALETAN--SAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFITNSMM-PMLCDALDVHL 741
T+ C TS K YM VTAH I + + T I + P HT + + +L V +++ + VV + D AAN+++ G +L GCAAH ++L + L PSI+ A ++ H S LES Q++ + K I A TRWNS + + E + V L + + T+ W +++ LEPF A TVL G+ T+S++ P + LD HL
Sbjct: 146 TTDCWTSVGTKDYMTVTAHAIGDRWQRRNFILETKPVRGIEDEDEPQRHTTQALQNQLRRVTEEWGLMNKVVGVVHDNAANVRRVGEGILANDI--GCAAHTLQLCINSALNSVPSIRSMSAAATRLVGHFKHSVIATNALESEQRQMGIEEHKLIQ-AVKTRWNSTFDMLRRLKEQRWAVCRVLSNRRYTNQTDARTLELTDHQWRLLEGLLDSLEPFKVATTVLSGEEHTTSSVVGPFMAGILDHHL 391
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: A0A1A8J3D6_NOTKU (BED-type domain-containing protein (Fragment) n=1 Tax=Nothobranchius kuhntae TaxID=321403 RepID=A0A1A8J3D6_NOTKU) HSP 1 Score: 80.1 bits (196), Expect = 1.230e-13 Identity = 63/224 (28.12%), Postives = 110/224 (49.11%), Query Frame = 1
Query: 61 AYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIELALRPVLE-EPSIKQTLAKHNKMATHVHASTRTREKLESLQKESRN-GKTKAIPLACATRWNSHLTQAKVILENKLQVLLALETANS--APKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFITNS-MMPML 717
AY+ + HFI+E S ++T + FP +HTA IA L T+M+++ I++ ++ + TD AAN+ L + H C AH + L +R L+ P ++ K K+A + ST RE+L LQ++ + + TRWNS + E + V AL + ++ AP T ++ + +E+L P EA L + ++ S ++P++
Sbjct: 126 AYLAINCHFINE-SDELTSMLLTVRSFPENHTAANIAKVLATLMEEWNIQSKLMCLVTDGAANMLACANNL-DARHIH-CIAHALNLVVRKALDLTPGLEDMRGKARKVAAYFRTSTLARERLLFLQRQMQAVAPVHKLIQEVDTRWNSTFDMLSRLYEQREPVSAALASLHTDVAP------LTSAEYDAISECLEVLSPLKEATVELSAEKSVSGSKVIPLI 340
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: UPI001C197A25 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C197A25) HSP 1 Score: 78.2 bits (191), Expect = 5.950e-13 Identity = 74/255 (29.02%), Postives = 117/255 (45.88%), Query Frame = 1
Query: 58 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIEL----ALRPV-------------LEEPSIKQTLAKHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLAC----ATRWNS-HLTQAKV--------ILENKLQVLLALETANSAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFITNSMM-PMLCDAL 729
+ Y+GVT +I + ++ T+ N HTA+ +A L V ++ + V ITTD AAN+KKA + W C+AH ++L AL PV P + L K + +A+ E L+ +KE+ + K A L +TRWNS +L ++ IL N L + L++ A + +I T+ +W A + E+L FA+A L G ++TNSM PML + +
Sbjct: 46 QGYIGVTCSYI-DTKFNLNEITLTVNYVRYPHTAQHVAESLDEVFNEWNLRDKVFTITTDNAANMKKAIASM-SNIRWQECSAHTLQLIVGKALVPVKALIMRVKRLIKFFMRPKQSERLEDIQKK--YPNANLENDELLDEAEKETIDVKDTAKYLQLINDVSTRWNSSYLAWVRLLYLKGWIKILFNVLSCNMDLDSKKDAKRLKQIMITDDEWDLIADLTEVLSTFADATEDLGGGKYVTNSMRTPMLMEII 296
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Match: UPI001C1C92E1 (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1C92E1) HSP 1 Score: 77.0 bits (188), Expect = 1.280e-12 Identity = 63/227 (27.75%), Postives = 104/227 (45.81%), Query Frame = 1
Query: 58 KAYMGVTAHFISEGSADITRCTIACNEFPGSHTAERIAAELTTVMKQYEIETSVVAITTDTAANIKKAGTQLLPQQEWHGCAAHKIELALRPVLEEPSIKQTLAKHNKMATHVHASTRTREKLESLQKESRNGKTKAIPLA--CATRWNS---------HLTQAKVILENKLQVLLALETANSAPKGPRICYTEKDWINTAAIVELLEPFAEAVTVLQGDSFITNSM 705
+ Y+G+T +I + ++ T+ N HT++ I L + ++++ ITTD AAN+KKA + + EW GC AH ++L + L+ + LA+ + ++ A G K + L ATRWNS +L + IL N L + LE+ A + +I T+ +W A + E+L FA+A L G +ITNS+
Sbjct: 29 QGYIGITCSYI-DSKFNLYEVTLTVNYVRYPHTSQHIMESLEETLDEWKLREKTFTITTDNAANMKKAISDM-DGIEWQGCTAHTLQLVIGKGLDN---NENLAE-GEQEEYIDA----------------RGTAKYLQLINDVATRWNSSYLAWSRLIYLKEWIKILLNTLSISTDLESKKDAKRLKQIMITDHEWDLIADLKEILSTFADATEELGGSKYITNSI 233 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83590.15987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig83590.15987.1 >prot_H-elongata_contig83590.15987.1 ID=prot_H-elongata_contig83590.15987.1|Name=mRNA_H-elongata_contig83590.15987.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=247bp CSWIYTQTRPYTSPCLTSQKAYMGVTAHFISEGSADITRCTIACNEFPGSback to top mRNA from alignment at H-elongata_contig83590:614..1700- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig83590.15987.1 ID=mRNA_H-elongata_contig83590.15987.1|Name=mRNA_H-elongata_contig83590.15987.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1087bp|location=Sequence derived from alignment at H-elongata_contig83590:614..1700- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig83590:614..1700- >mRNA_H-elongata_contig83590.15987.1 ID=mRNA_H-elongata_contig83590.15987.1|Name=mRNA_H-elongata_contig83590.15987.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1482bp|location=Sequence derived from alignment at H-elongata_contig83590:614..1700- (Himanthalia elongata Himel1 dioecious)back to top |