prot_H-elongata_contig83571.15986.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig83571.15986.1
Unique Name	prot_H-elongata_contig83571.15986.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	157

Homology

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BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: W4GZ05_9STRA (Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.160e-83
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0

Query:   21 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136

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BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: A0A6V1P6C6_HETAK (Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6C6_HETAK)

HSP 1 Score: 249 bits (637), Expect = 4.070e-83
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0

Query:   21 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLR+QGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    7 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRYQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 142

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BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: A0A1Z5K8H0_FISSO (Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5K8H0_FISSO)

HSP 1 Score: 249 bits (636), Expect = 4.730e-83
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0

Query:   21 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136

[Close]

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: A0A7S1BJN3_9STRA (Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A7S1BJN3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 5.330e-83
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0

Query:   21 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFK+DLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:   15 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 150

[Close]

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: A0A7S0BCZ4_9RHOD (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S0BCZ4_9RHOD)

HSP 1 Score: 250 bits (638), Expect = 6.220e-83
Identity = 133/140 (95.00%), Postives = 138/140 (98.57%), Query Frame = 0

Query:   17 FQGSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            ++G MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:   26 YEGEMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 165

[Close]

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: A0A672K8D0_SINGR (Histone H3 n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A672K8D0_SINGR)

HSP 1 Score: 249 bits (635), Expect = 7.180e-83
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0

Query:   19 GSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            GSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 GSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138

[Close]

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: A0A2J7RT98_9NEOP (Histone H3 (Fragment) n=4 Tax=Bilateria TaxID=33213 RepID=A0A2J7RT98_9NEOP)

HSP 1 Score: 249 bits (635), Expect = 7.430e-83
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0

Query:   19 GSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            GSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    2 GSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139

[Close]

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: K0S7I6_THAOC (Histone domain-containing protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=K0S7I6_THAOC)

HSP 1 Score: 251 bits (640), Expect = 1.350e-82
Identity = 135/136 (99.26%), Postives = 136/136 (100.00%), Query Frame = 0

Query:   21 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKST+LLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS
Sbjct:   74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTDLLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 209

[Close]

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: A0A8B9F8D8_9PSIT (Histone H3 n=2 Tax=Amniota TaxID=32524 RepID=A0A8B9F8D8_9PSIT)

HSP 1 Score: 248 bits (633), Expect = 1.500e-82
Identity = 132/139 (94.96%), Postives = 138/139 (99.28%), Query Frame = 0

Query:   18 QGSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            +G+MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 RGAMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 139

[Close]

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Match: A0A8C1ET08_CYPCA (Histone H3 n=4 Tax=Euteleostomi TaxID=117571 RepID=A0A8C1ET08_CYPCA)

HSP 1 Score: 248 bits (632), Expect = 2.060e-82
Identity = 132/138 (95.65%), Postives = 137/138 (99.28%), Query Frame = 0

Query:   19 GSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 156
            G+MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK+DLRFQ SAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER+
Sbjct:    1 GTMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot

BLAST of mRNA_H-elongata_contig83571.15986.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
W4GZ05_9STRA	1.160e-83	99.26	Histone H3 n=38 Tax=Oomycota TaxID=4762 RepID=W4GZ...	[more]
A0A6V1P6C6_HETAK	4.070e-83	98.53	Histone H3 n=1 Tax=Heterosigma akashiwo TaxID=2829...	[more]
A0A1Z5K8H0_FISSO	4.730e-83	98.53	Histone H3 n=2 Tax=Bacillariophyta TaxID=2836 RepI...	[more]
A0A7S1BJN3_9STRA	5.330e-83	98.53	Histone H3 n=22 Tax=Eukaryota TaxID=2759 RepID=A0A...	[more]
A0A7S0BCZ4_9RHOD	6.220e-83	95.00	Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ...	[more]
A0A672K8D0_SINGR	7.180e-83	96.38	Histone H3 n=2 Tax=Euteleostomi TaxID=117571 RepID...	[more]
A0A2J7RT98_9NEOP	7.430e-83	96.38	Histone H3 (Fragment) n=4 Tax=Bilateria TaxID=3321...	[more]
K0S7I6_THAOC	1.350e-82	99.26	Histone domain-containing protein n=8 Tax=Bacillar...	[more]
A0A8B9F8D8_9PSIT	1.500e-82	94.96	Histone H3 n=2 Tax=Amniota TaxID=32524 RepID=A0A8B...	[more]
A0A8C1ET08_CYPCA	2.060e-82	95.65	Histone H3 n=4 Tax=Euteleostomi TaxID=117571 RepID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 118..134 score: 96.93 coord: 100..118 score: 76.89 coord: 54..75 score: 93.58 coord: 37..51 score: 92.32 coord: 23..37 score: 97.1 coord: 78..95 score: 97.46 coord: 134..155 score: 94.86
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 54..156 e-value: 3.3E-73 score: 259.2
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 12..155
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 87..95
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 35..41
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 22..156 e-value: 6.2E-79 score: 264.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 22..153
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 21..152 e-value: 2.1E-53 score: 180.1
None	No IPR available	PANTHER	PTHR11426:SF224		coord: 12..155
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 18..22
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..22
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 23..156
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig83571	contig	H-elongata_contig83571:2093..2563 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig83571.15986.1	mRNA_H-elongata_contig83571.15986.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig83571 2093..2563 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig83571.15986.1 ID=prot_H-elongata_contig83571.15986.1|Name=mRNA_H-elongata_contig83571.15986.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
YQSCFIIFSSSSISALFQGSMARTKQTARKSTGGKAPRKQLATKAARKSA
PATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK
SDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARR
IRGERS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000164	Histone_H3/CENP-A
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3