prot_H-elongata_contig83515.15983.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83515.15983.1
Unique Nameprot_H-elongata_contig83515.15983.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length254
Homology
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: D7G2W2_ECTSI (GroES chaperonin, plastidal n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2W2_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 3.760e-95
Identity = 155/252 (61.51%), Postives = 196/252 (77.78%), Query Frame = 0
Query:    7 IATISVFAATASAFVITPTALQPMSLATTTYSTAPHVHTTGRVRA----RSGPPPPTVLRASTGEAATFELDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            +AT++V A++ SAFV+TP  ++P SL T    +                RS   P  +LR+S    A +ELDEK LRGPL P+EDTV+VKV++ K VTEGG+FLP MKN + TRGTV A+G+G+RHWDTGV+IPI+V+ GE VV+GNFDGT VQYQGSEH+LMR T+LL+AY+G+EI LDTARM+GDR+LL+VKAVPKG ++S+ GVLIAESATRS++P+VG VVK GPGRM PSG  +PM+CEVGDCVKYK
Sbjct:    8 LATLAVVASSTSAFVVTPGEVRPRSLTTAAAGSXXXXXXXXXXXXXXXXRSRRAPVGLLRSSE-TTAEYELDEKELRGPLTPVEDTVMVKVDKQKAVTEGGVFLPKMKNVKITRGTVTAVGEGKRHWDTGVKIPITVEVGERVVYGNFDGTSVQYQGSEHLLMRDTELLMAYEGEEITLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTVGQVVKVGPGRMVPSGLMMPMYCEVGDCVKYK 258          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: A0A7S2KVZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KVZ8_9STRA)

HSP 1 Score: 154 bits (390), Expect = 6.380e-43
Identity = 76/183 (41.53%), Postives = 119/183 (65.03%), Query Frame = 0
Query:   72 ELDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            EL+ + + G L+P  + +LVK+ EA+  TEGG+ L     ++KT G VV++G GR H ++G+  P+ V  GEGV++G +DGT + Y G +H L+R TD+++ Y GD++ L+   +  D +L++V     G    + G+LIA SA+ +SKPS G VVK GPGRMA +G+ + M   VGD +K++
Sbjct:   40 ELEGRDIEGALVPCTNFILVKIAEAEDQTEGGIILSGRAKQKKTEGVVVSIGPGRTHQESGITFPMPVSPGEGVLYGKYDGTELDYDGCKHTLVRDTDIMVKYSGDKMTLENCDVTSDSVLVKVNR--SGEEEMASGLLIASSASGNSKPSTGTVVKVGPGRMAQNGEMMDMDVAVGDEIKFR 220          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: K0T1C8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T1C8_THAOC)

HSP 1 Score: 151 bits (381), Expect = 1.930e-41
Identity = 78/182 (42.86%), Postives = 120/182 (65.93%), Query Frame = 0
Query:   73 LDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            L+ + + G L P  + VLVK+   +  TEGG+ L      +KT GTV++ G G+ H ++G+  P+ V++G+GVV+G +DGT V+Y G +H L+R  D+L+ ++GD++ LDTA ++ D +L++V     G  T+S G+LIA SA +  KPS G VVK GPGRMA +G+ + +   VGD VKY+
Sbjct:   38 LEGREIEGALTPTNNFVLVKIAPIEDETEGGILLTGSAKIKKTEGTVISAGPGKTHQESGLLFPMPVESGDGVVYGKYDGTEVEYDGDKHTLIRDDDILVKFKGDKLTLDTADVISDNVLVKVD--DDGEETAS-GLLIAASAKKGGKPSTGTVVKVGPGRMASNGEIMTVDIGVGDMVKYR 216          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: A0A835YMZ7_9STRA (Chaperonin 10-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMZ7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 8.470e-41
Identity = 81/192 (42.19%), Postives = 120/192 (62.50%), Query Frame = 0
Query:   65 TGEAATFE--LDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            T EAAT E  L  K + GPLMPI + +LV+V++    T GG+ L     +R T GTVVA+G G++H +TGV+IP+    G+ V++G FDGT ++Y G +H  +R TD+L  Y GD +  +T +M+GD+IL+ V+   K   TSS   L A+ +    KP++G V+  GPGR    G T+PM  + GD +K++
Sbjct:    3 TAEAATAEHSLAGKPIGGPLMPISNAILVRVKDKAASTVGGVQLLEKSVDRPTEGTVVAVGPGKKHQETGVEIPMPCNVGDKVLYGKFDGTKLEYDGKDHQFIRDTDVLFVYSGDAMTPETIKMMGDQILVEVE--DKEEKTSSGLFLAADDSGIGKKPTMGKVLAVGPGRTTADGNTVPMTLQPGDLIKFR 192          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: A0A7S2YEM5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YEM5_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.390e-40
Identity = 79/199 (39.70%), Postives = 125/199 (62.81%), Query Frame = 0
Query:   57 PPTVLRASTGEAATFELDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGD-EIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            P +V R +  +AAT  LD + ++G + P+ + +LVKV EA+  TEGG+ L      +KT GTVVA+G GR H D+G+ + + V AGEGVV+G FDGT +   G +H L+R  D+++ +    ++ +D   +V D +L+ V    K   ++  G+LIA S+++ S+PS G+V K GPGR+A +G+ + M   V D VK++
Sbjct:   25 PTSVSRTALADAATSTLDGRKIKGDVQPLNNFLLVKVAEAQDQTEGGILLTGKAKIQKTEGTVVAVGPGRTHQDSGIVVEMPVAAGEGVVYGQFDGTEIDLDGKKHTLIRDDDVMVKFDASKDLSIDNVDVVADNVLVYVD---KKEQSTDGGILIARSSSQDSRPSTGLVKKVGPGRVASNGELMAMDVAVDDMVKFR 220          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: B5Y3S9_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3S9_PHATC)

HSP 1 Score: 145 bits (366), Expect = 3.450e-39
Identity = 77/191 (40.31%), Postives = 119/191 (62.30%), Query Frame = 0
Query:   64 STGEAATFELDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            S  + +   LD + + G + P+ + VLVK+ EA++ TEGG+ L      +KT GTVVA+G GR H D+G+   + V  G+GVV+G FDGT +   G++H+L+R  D+L+ + GD + LD+  MV D +L+ V+      + +  G+LIA+S++   KPS G+VVK GPG+MA  G  + M   V D VK++
Sbjct:   31 SLTQCSATTLDGRKITGDVKPLNNFVLVKIGEAREQTEGGILLTGKAKIKKTEGTVVAIGPGRTHQDSGIVFDMPVSEGQGVVYGKFDGTEINIGGAKHVLIRDDDILVKFTGD-LSLDSVDMVRDNVLVYVE---NDESETDGGILIAKSSSADKKPSTGIVVKVGPGKMASDGSLMSMDVAVDDMVKFR 217          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: A0A8J2WID0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WID0_9STRA)

HSP 1 Score: 139 bits (350), Expect = 7.740e-37
Identity = 75/198 (37.88%), Postives = 121/198 (61.11%), Query Frame = 0
Query:   58 PTVLRASTGEAATFELDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGD-EIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            PT  R  T     + LD+  + GPL P+ + +LVK+++    T+GG+FLP    E+ + G VVA G G+ H DTGV +P  V  G+ V++G FDGT V+Y G +H L++  D+L+++ GD  + L   + V D +L++V  V +    ++ G+ +A   +  ++ + GVVVKTG GR+A  G ++P+  EVG+ VK+K
Sbjct:   19 PTAPRRQTS-LRDYTLDDAPIGGPLEPVANYILVKIDDGIDATKGGVFLPDQAKEKPSAGIVVAAGAGKAHPDTGVVVPNPVTEGDRVLYGKFDGTSVKYCGEDHQLIKDDDILLSWAGDASMTLGEVKCVADNVLVQVTKVEE---ETASGIALAAGVSEQTRTTSGVVVKTGTGRVAADGASVPVPVEVGESVKFK 212          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: A0A6H5K7K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.460e-36
Identity = 77/210 (36.67%), Postives = 123/210 (58.57%), Query Frame = 0
Query:   48 RVRARSGPPPPTVLRASTGEAATFE--LDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSV-GVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            R  A + PP  +++  ST E  T +  LD+K + GPL PI + +LVKV      ++GG+ LP     + T G VV++G G+ H +TGV + +    G+ V++G FDGT V Y G++H  +R  D+L  Y G+ ++  T +M+ D +L++V   P+ ATT+  G+L+ +    + + S  G VV TGPGR +  G+ +PM    GD VK++
Sbjct:    6 RTAAPARPPASSLVSMSTAETETAQYLLDKKAIGGPLTPIANYILVKVRSKDVASQGGIILPEKAQVKPTEGVVVSMGPGKTHPETGVPVDMPCAVGDKVLYGEFDGTAVDYVGTDHQFVRDQDILFVYSGERMEPSTIKMIRDELLVKVD--PE-ATTTKSGLLLGQKEENTGEGSTTGEVVATGPGRSSSDGEIVPMSVATGDFVKFR 212          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: A0A7S1UT19_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UT19_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.620e-35
Identity = 78/200 (39.00%), Postives = 121/200 (60.50%), Query Frame = 0
Query:   59 TVLRASTGEAA---TFELDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATR-SSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            T+LRA T  A    T  L+ + ++G ++P+ + VLVK     + T+ G+ L   +   KT+G VV++G GR H +TG  I I    G+ V++G +DG  + + G  H+L+R TD+LI Y GD + LD   +V D +L+ V A  +   T++ GVL+A++    S++PS G VVK GPG+MA  G  +PM  +VGD VK++
Sbjct:   35 TLLRAETETAEATKTNTLEGREIQGDIVPLNNFVLVKTVGVVEKTDSGIMLAGSEKVVKTKGKVVSVGPGRTHQETGRSIEIPFLNGDSVLYGEYDGIELDFNGETHMLVRDTDVLIKYSGDTLTLDAVDVVRDMVLIEVDAKDQ---TTAGGVLLADAGRDGSNRPSTGTVVKVGPGKMAGDGSILPMRAKVGDRVKFR 231          
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Match: A0A7S2XVL1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XVL1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.380e-35
Identity = 73/195 (37.44%), Postives = 116/195 (59.49%), Query Frame = 0
Query:   60 VLRASTGEAATFELDEKVLRGPLMPIEDTVLVKVEEAKKVTEGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNFDGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPKGATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDCVKYK 254
            V ++S  +     L+ + + G L P  + VLVK+   ++ T GG+FL       KT GTV+++G G+ H ++GV   + V  G+GVV+G +DGT ++Y    H L+R  D+++ + G E+ LD+  + G+ +L+ VK+       S+ G+LIA    R SKPS G +VK GPG+MA +GK + M  EVG  VK++
Sbjct:   29 VTKSSASQLGAI-LEGRKIEGELKPTNNFVLVKLAPIEESTSGGIFLTGSAKIEKTEGTVISVGPGKTHTESGVTFDMPVIPGDGVVYGKYDGTELEYNDERHTLIRDDDIMVKFTG-ELTLDSVEVTGENVLIAVKSSDDE--ESASGLLIAAQTKRGSKPSTGEIVKVGPGKMASNGKLMDMDVEVGAMVKFR 219          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83515.15983.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2W2_ECTSI3.760e-9561.51GroES chaperonin, plastidal n=2 Tax=Ectocarpus Tax... [more]
A0A7S2KVZ8_9STRA6.380e-4341.53Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
K0T1C8_THAOC1.930e-4142.86Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A835YMZ7_9STRA8.470e-4142.19Chaperonin 10-like protein n=1 Tax=Tribonema minus... [more]
A0A7S2YEM5_9STRA2.390e-4039.70Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B5Y3S9_PHATC3.450e-3940.31Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A8J2WID0_9STRA7.740e-3737.88Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6H5K7K5_9PHAE1.460e-3636.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1UT19_9STRA2.620e-3539.00Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2XVL1_9STRA5.380e-3537.44Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 82..97
score: 36.65
coord: 104..125
score: 35.61
coord: 140..152
score: 35.9
coord: 161..174
score: 24.11
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 81..174
e-value: 2.0E-15
score: 67.3
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 82..171
e-value: 8.4E-20
score: 70.6
coord: 184..254
e-value: 3.3E-10
score: 39.9
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 59..253
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40coord: 185..254
e-value: 3.5E-12
score: 48.1
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40coord: 78..184
e-value: 5.3E-24
score: 86.0
NoneNo IPR availablePANTHERPTHR10772:SF3220 KDA CHAPERONIN, CHLOROPLASTICcoord: 59..253
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 81..171
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 186..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83515contigH-elongata_contig83515:1064..1825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83515.15983.1mRNA_H-elongata_contig83515.15983.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83515 1064..1825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83515.15983.1 ID=prot_H-elongata_contig83515.15983.1|Name=mRNA_H-elongata_contig83515.15983.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=254bp
MASQSIIATISVFAATASAFVITPTALQPMSLATTTYSTAPHVHTTGRVR
ARSGPPPPTVLRASTGEAATFELDEKVLRGPLMPIEDTVLVKVEEAKKVT
EGGLFLPVMKNERKTRGTVVALGQGRRHWDTGVQIPISVKAGEGVVFGNF
DGTLVQYQGSEHILMRATDLLIAYQGDEIKLDTARMVGDRILLRVKAVPK
GATTSSQGVLIAESATRSSKPSVGVVVKTGPGRMAPSGKTIPMHCEVGDC
VKYK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR037124Chaperonin_GroES_sf
IPR011032GroES-like_sf