prot_H-elongata_contig83514.15982.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83514.15982.1
Unique Nameprot_H-elongata_contig83514.15982.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length142
Homology
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BLAST of mRNA_H-elongata_contig83514.15982.1 vs. uniprot
Match: D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 3.810e-43
Identity = 93/139 (66.91%), Postives = 106/139 (76.26%), Query Frame = 0 
Query:   15 PLFPGSSADARGLRQTLELPASGVTVLCVDPPASYTGEAFLRSALLGRAATVHIHAGEGDGDLAASLSRGLGIQFMTAKLQLSALWPGLA-GRQWKRGAGVARAREG----------ELSDIGAILDTVTAALEEIRDQ 142
            PL+PGSSADAR LR+ L  PASGVTVLCVDPPASYTG+AF+RSALLGRAATVH+ AGEG G LA+ L+RGLG++FM  KLQ+SAL PGLA G Q   GA   R R G          ELSDI A+L+T TAALEEIR+Q
Sbjct:    4 PLYPGSSADARALREVLSRPASGVTVLCVDPPASYTGDAFVRSALLGRAATVHVQAGEGYGSLASCLARGLGVEFMAIKLQMSALLPGLAAGEQASSGA---RGRAGGSSSTDATNSELSDIRAVLETATAALEEIRNQ 139
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BLAST of mRNA_H-elongata_contig83514.15982.1 vs. uniprot
Match: A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 6.510e-40
Identity = 90/150 (60.00%), Postives = 106/150 (70.67%), Query Frame = 0 
Query:   15 PLFPGSSADARGLRQTLELPASGVTVLCVDPPASYTGEAFLRSALLGRAATVHIHAGEGDGDLAASLSRGLGIQFMTAKLQ------------LSALWPGLAGRQW-----KRGAGVARARE-----GELSDIGAILDTVTAALEEIRDQ 142
            PL+PGSSADAR LR+ L  PASGVTVLCVDPPASYTG+AF+RSALLGRAATVH+ AGEG G LA+ L+RGLG++FM  KLQ            +SAL PGLA  +      + GAG  R+        ELSDI A+L+T TAALEEIR+Q
Sbjct:    4 PLYPGSSADARALREMLSRPASGVTVLCVDPPASYTGDAFVRSALLGRAATVHVQAGEGYGSLASCLARGLGVEFMAIKLQVLSSHAAFFVGKMSALLPGLAAGEQASSGARGGAGAGRSSSTDTTNSELSDIRAVLETATAALEEIRNQ 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83514.15982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G086_ECTSI3.810e-4366.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKL7_9PHAE6.510e-4060.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83514contigH-elongata_contig83514:911..1668 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83514.15982.1mRNA_H-elongata_contig83514.15982.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83514 911..1668 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83514.15982.1 ID=prot_H-elongata_contig83514.15982.1|Name=mRNA_H-elongata_contig83514.15982.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp
NGGGGGSRGQAAQLPLFPGSSADARGLRQTLELPASGVTVLCVDPPASYT
GEAFLRSALLGRAATVHIHAGEGDGDLAASLSRGLGIQFMTAKLQLSALW
PGLAGRQWKRGAGVARAREGELSDIGAILDTVTAALEEIRDQ
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