prot_H-elongata_contig83360.15975.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83360.15975.1
Unique Nameprot_H-elongata_contig83360.15975.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
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BLAST of mRNA_H-elongata_contig83360.15975.1 vs. uniprot
Match: D7FNB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNB6_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.190e-27
Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:    1 QVIGPLYFVHGPAVLEAVFASMEEWPAPCPGSLCPLPFLSETIMFQVPEIDMPPQVAAKYR 61
            +VIGPLYF HG AVLEAVF+S E+WPAPCPGSLCPLPFL ET+MFQVP+IDMPPQVA+ YR
Sbjct:  147 KVIGPLYFTHGSAVLEAVFSSFEDWPAPCPGSLCPLPFLGETVMFQVPDIDMPPQVASNYR 207
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BLAST of mRNA_H-elongata_contig83360.15975.1 vs. uniprot
Match: A0A6H5KGC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC5_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.630e-27
Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:    1 QVIGPLYFVHGPAVLEAVFASMEEWPAPCPGSLCPLPFLSETIMFQVPEIDMPPQVAAKYR 61
            +VIGPLYF HG AVLEAVF+S E+WPAPCPGSLCPLPFL ET+MF VP+IDMPPQVA+KYR
Sbjct:  177 EVIGPLYFTHGSAVLEAVFSSFEDWPAPCPGSLCPLPFLGETVMFLVPDIDMPPQVASKYR 237
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83360.15975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNB6_ECTSI1.190e-2781.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGC5_9PHAE1.630e-2781.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83360contigH-elongata_contig83360:481..675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83360.15975.1mRNA_H-elongata_contig83360.15975.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83360 481..675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83360.15975.1 ID=prot_H-elongata_contig83360.15975.1|Name=mRNA_H-elongata_contig83360.15975.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
QVIGPLYFVHGPAVLEAVFASMEEWPAPCPGSLCPLPFLSETIMFQVPEI
DMPPQVAAKYRSAPF
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