prot_H-elongata_contig8335.15974.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8335.15974.1
Unique Nameprot_H-elongata_contig8335.15974.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length204
Homology
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 4.470e-82
Identity = 114/186 (61.29%), Postives = 139/186 (74.73%), Query Frame = 0
Query:   27 PYDERFYGEGTVYGEALVGSGNCAIREPLPSMYHGMIPVALNDAQYGNSEMCGACIRGTGD---------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPTFLFEGSNEYYWKIQPRGTKSPVKKLWVNGEKATRTQDNFFVIEGDEPYYGDQEVKTKTFLKKRKKTQVSL 203
            PYDE+F G+ T YG    G GNCAIR PLP MY GMIPVALND QY +S MCGACI G G           G F+AYV DRCPEC  GDLDFA +G GRW+I+W FVPC+ G D TFLFEGSNE+YWKIQPRG +SPV++LW+NG++A R++DNFF++EG  P+ G+QEV TKT L KR++  V++
Sbjct:   36 PYDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGG-PFDGEQEVHTKTVLNKRRRQSVAM 220          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 3.320e-56
Identity = 93/197 (47.21%), Postives = 123/197 (62.44%), Query Frame = 0
Query:    6 SDVALLLSAIILRPTTSWKIEPYDERFYGEGTVYGEALVGSGNCAIREPLPSMYHGMIPVALNDAQYGNSEMCGACIRGTGD---------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPTFLFEGSNEYYWKIQPRGTKSPVKKLWVNGEKATRTQDNFFVIEGDEPYYGDQEVKTKTFL 193
            S V L L+ ++     +     Y   F+GEGT YG      GNCAIR P+PSMY+GM+PVA+N+AQY NS  CGAC++ TG           G F+AYV DRCPEC +GD+D +  G GRW ++WKF+PC  G    FLFEGSN YY K+QPRG K+PV  L V G+  T+TQDNF++++    +     V+ +T L
Sbjct:    3 SPVILALALLLAVVANAMSPNDYYRVFHGEGTYYGYTT--RGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCP-GEFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGFRFPITVQMRTVL 196          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 184 bits (466), Expect = 2.020e-54
Identity = 90/194 (46.39%), Postives = 121/194 (62.37%), Query Frame = 0
Query:   11 LLSAIILRPTTSWKIEPYDER--FYGEGTVYGEALVGSGNCAIREPLPSMYHGMIPVALNDAQYGNSEMCGACIRGTGD---------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPTFLFEGSNEYYWKIQPRGTKSPVKKLWVNGEKATRTQDNFFVIEGDEPYYGDQEVKTKTFL 193
            +L   +L P     + P D R  F+G+GT YG      GNCAIR PLP MY GM+PVA+N+AQY  S+ CGAC+  TG          +G F+AYV DRCPEC +GD+D +  G GRW + W+F+PC  G    FLFEGSN +Y K+QPRG K+PV    VNG++ T+TQDNF++++    +     V+ +T L
Sbjct:    1 MLFLTLLLPIAVTALSPGDYRRTFFGDGTYYGYTT--RGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCP-GEWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPLTVQMRTVL 191          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 1.090e-51
Identity = 89/195 (45.64%), Postives = 115/195 (58.97%), Query Frame = 0
Query:   19 PTTSWKIEPYDERFYGEGTVYGEALVGSGNCAIREPLPSMYHGMIPVALNDAQYGNSEMCGACIRGTGD---------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPTFLFEGSNEYYWKIQPRGTKSPVKKLWVNGEKATRTQDNFFVIEGD-EPYYGDQEVKTKTFLKKRKKTQVSL 203
            PT S+    Y E + GEGT YG    G   C+  + +P MY GMIPVALN  QYG+S MCGAC+ GT              F+A++ D+CPEC  GDLDF+M G GRW+I WKFV C  G + +F+   +N YYWK+QPRGT +PV  L V+G+ A RT DN F +  D   + G Q V T T     +  +VS+
Sbjct:   95 PTPSYSGGQYGEEYSGEGTYYGHTTAGM--CSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACP-GEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.980e-49
Identity = 86/186 (46.24%), Postives = 113/186 (60.75%), Query Frame = 0
Query:   28 YDERFYGEGTVYGEALVGSGNCAIREPLPSMYHGMIPVALNDAQYGNSEMCGACIRGTGD--------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPTFLFEGSNEYYWKIQPRGTKSPVKKLWVNGEKATRTQDNFFVIE--GDEPYYGDQEVKTKTFLKKRKKTQVSL 203
            Y   F GEGT Y      +GNC   +  PS+Y GM PVALN+ QYG+S MCGAC+ G G         +G F+ ++MD+CPEC+ GDLDF     GRW+I WKFV C +G + +F  E   EYYWKIQPRGT +PV+ L + G  A RT DN F +E    +P+Y  Q V T T     ++T++S+
Sbjct:  311 YGITFNGEGTYY--TGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPVGTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTTVGGVVEETEMSV 494          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 156 bits (395), Expect = 1.380e-44
Identity = 77/152 (50.66%), Postives = 96/152 (63.16%), Query Frame = 0
Query:   34 GEGTVYGEALVGSGNCAIREPLPSMYHGMIPVALNDAQYGNSEMCGACIR--GTGD-------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKS-GGDPTFLFEGSNEYYWKIQPRGTKSPVKKLWVNGEKATRTQDNFFVI 175
            GEGT +G      GNCA+ +PLP+ Y G++ VA++ A Y  S  CGAC+R  G+GD        G F AYVMDRCPECA GDLD A  G GRW ++W  VPC + GG P FL EGSN +Y K+Q RG  +P   + V G    RTQDNFF++
Sbjct:   50 GEGTYFGPTT--RGNCAL-DPLPAQYGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIV 198          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 8.960e-44
Identity = 82/186 (44.09%), Postives = 109/186 (58.60%), Query Frame = 0
Query:   28 YDERFYGEGTVYGEALVGSGNCAIREPLPSMYHGMIPVALNDAQYGNSEMCGACIRGTGD--------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPTFLFEGSNEYYWKIQPRGTKSPVKKLWVNGEKATRTQDNFFVIE--GDEPYYGDQEVKTKTFLKKRKKTQVSL 203
            Y   F G+GT Y    + +GNC   +  PS+Y GM PVALN AQYG+S MCG+C+ G G         +G F+ ++MD+CPEC  GDLDF     GRW+I W+FV C  G + +F       YYWKIQPRGT +PV+ L + G  A RT DN F +E     P+Y  Q V T T     ++T++S+
Sbjct:  348 YGTTFEGDGTYY--TGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPIGTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACP-GEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: A0A1S3HSP2_LINUN (uncharacterized protein LOC106157840 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HSP2_LINUN)

HSP 1 Score: 107 bits (267), Expect = 4.140e-25
Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = 0
Query:   26 EPYDERFYGEGTVYGEAL-VGSGNCAIREPLP---SMYHGMIPVALNDAQYGNSEMCGACIRGTGD---------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPTFLFEGSNEYYWKIQPRGTKSPVKKLWV-NGEKAT-----RTQDNFFVI 175
            E Y +RF+GEGT YG++       C +R  LP   S Y      A+N  Q+  S  CG C+R TG           G +  YV D CP C  GD+DFA+ G GRWNI++  VPC    + ++ F+ S+ +Y KIQ   T+ PV  + + NG         RT D F+++
Sbjct:   28 ELYQKRFFGEGTYYGQSYNQAKETCQLRSMLPGKLSDYGIDSTAAINIEQFTGSLTCGICLRVTGSGQGLGLNPLTGTYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDNVSYRFQDSSPWYIKIQVGNTRLPVTGMALYNGASKEYVPMMRTNDGFWIM 196          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: A0A2C9LCA8_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LCA8_BIOGL)

HSP 1 Score: 104 bits (259), Expect = 6.380e-24
Identity = 60/170 (35.29%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   25 IEPYDERFYGEGTVYGEALVGSGNCAIREPLPSMYHG---MIPVALNDAQYGNSEMCGACIRGTGD---------MGKFEAYVMDRCPECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPT-FLFEGSNEYYWKIQPRGTKSPVKKLWV--NGEKATRTQ--DNFFVIEG 177
            ++ + + + G+GT YGE +   G C I  PLP           VALN  Q+ NS  CG CI+  G          +G+   YV D CP C  GD+DFA++G GRWNI  + V C  G     + F+GSN +Y K+Q R  + P+  + +  NG   T T   D ++++ G
Sbjct:   29 LDLFTKSYKGDGTYYGETV--DGTCQIARPLPMAASDPKISALVALNRPQFLNSMTCGMCIKVVGSGHGLGNNPIVGEHIVYVKDMCPVCHEGDVDFALDGDGRWNITMQAVQCPVGSSTIQYAFQGSNAWYIKLQIRNARIPITGVQIEKNGAWQTLTHSIDGYWLLSG 196          
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Match: UPI001A0F69A1 (Uncharacterized protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI001A0F69A1)

HSP 1 Score: 101 bits (251), Expect = 1.690e-22
Identity = 62/163 (38.04%), Postives = 89/163 (54.60%), Query Frame = 0
Query:   27 PYDERF-YGEGTVYGEALVGSGNCAIREPLPSMYHGMIPVALNDAQYGNSEMCGACIRGTGDMGKFEAYVMDRCPECAHGDLDFAMEG--------TGRWNINWKFVPCKSGGDPTFLF-EGSNEYYWKIQPRGTKSPV---KKLWVNGEKAT--RTQDNFFV 174
            P DE   YGEGT YG    G+GNC+  +P P     ++  ALN+  YGN+++CGA +  TG  G     ++DRCPEC  GD+DF+ E          GR  I+W+ V  +  G   + F EGSN Y+  +Q R  ++P+   + L  NG+  T  R + N+FV
Sbjct:   76 PSDEEIRYGEGTFYG--ATGAGNCSF-DPTPD---NLMVAALNETDYGNADVCGAYVEATGPQGVVIVRIVDRCPECQPGDIDFSGEAFARIANPVDGRVPISWRIVSPEIDGPIVYRFKEGSNPYWTAVQIRNHRNPIATFEYLDENGQFQTVPRERYNYFV 232          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8335.15974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHU1_ECTSI4.470e-8261.29Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A2V3ISL2_9FLOR3.320e-5647.21Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
F2Z7J0_9FLOR2.020e-5446.39Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
D8LRN1_ECTSI1.090e-5145.64Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D8LGP4_ECTSI1.980e-4946.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1X6NJE1_PORUM1.380e-4450.66Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A6H5KBW3_9PHAE8.960e-4444.09Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A1S3HSP2_LINUN4.140e-2536.69uncharacterized protein LOC106157840 n=1 Tax=Lingu... [more]
A0A2C9LCA8_BIOGL6.380e-2435.29Uncharacterized protein n=2 Tax=Biomphalaria glabr... [more]
UPI001A0F69A11.690e-2238.04Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 27..125
e-value: 3.5E-17
score: 64.5
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 30..147
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 133..192
e-value: 4.2E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR31836FAMILY NOT NAMEDcoord: 19..177
NoneNo IPR availablePANTHERPTHR31836:SF21EXPANSIN-LIKE PROTEIN 2coord: 19..177
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.604

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8335contigH-elongata_contig8335:6547..7668 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8335.15974.1mRNA_H-elongata_contig8335.15974.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8335 6547..7668 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8335.15974.1 ID=prot_H-elongata_contig8335.15974.1|Name=mRNA_H-elongata_contig8335.15974.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=204bp
MVVNVSDVALLLSAIILRPTTSWKIEPYDERFYGEGTVYGEALVGSGNCA
IREPLPSMYHGMIPVALNDAQYGNSEMCGACIRGTGDMGKFEAYVMDRCP
ECAHGDLDFAMEGTGRWNINWKFVPCKSGGDPTFLFEGSNEYYWKIQPRG
TKSPVKKLWVNGEKATRTQDNFFVIEGDEPYYGDQEVKTKTFLKKRKKTQ
VSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf