prot_H-elongata_contig8325.15963.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8325.15963.1
Unique Nameprot_H-elongata_contig8325.15963.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A6H5JZ10_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ10_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.710e-66
Identity = 96/134 (71.64%), Postives = 115/134 (85.82%), Query Frame = 0
Query:    1 MQEWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSG-NWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWNAIVLR 133
            +QEWNKIAH FLK SRTG+QCATHW+MV+KP+LLKGVWSPEEDA IFDC+ARGV+DW+EVA+ LPKRK KHCRERW++HLDP L  G  WT  EE +L+SAVEA+GTNW+++AR  PGR+E +IQQ WN IV R
Sbjct:    6 LQEWNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSPEEDAVIFDCVARGVTDWAEVAAALPKRKPKHCRERWSNHLDPNLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWNEIVFR 139          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: D8LKA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA8_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 1.300e-63
Identity = 93/132 (70.45%), Postives = 113/132 (85.61%), Query Frame = 0
Query:    3 EWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSG-NWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWNAIVLR 133
            EWNKIAH FLK SRTG+QCATHW+MV+KP+LLKGVWS EEDA IFDC+ARGV+DW+EVA+ LPKRK KHCRERW++HLDP+L  G  WT  EE +L+SAVEA+GTNW+++AR  PGR+E +IQQ WN +V R
Sbjct:  145 EWNKIAHHFLKGSRTGTQCATHWKMVVKPALLKGVWSAEEDAVIFDCVARGVTDWTEVAAALPKRKPKHCRERWSNHLDPSLRKGPGWTAAEEVKLVSAVEANGTNWSLIARHFPGRSEAVIQQHWNELVFR 276          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A2R5GBT4_9STRA (Transcription factor MYB3R-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GBT4_9STRA)

HSP 1 Score: 137 bits (344), Expect = 5.280e-35
Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 0
Query:    2 QEWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWNAIVLR 133
            + W +I+ +FL   R+  QC   W+ VLKP L+KG W+ EED  I + I  GV+ WSE+A+ +P R  K CRERW +HLDP++  G WT EE+  L+   E  G  W  +A+ LPGR+E  ++ +WN+ + R
Sbjct:   12 RNWKRISQEFLNGKRSDVQCLHRWQKVLKPGLIKGPWTKEEDDTIMEAIESGVTKWSEIATLIPGRIGKQCRERWFNHLDPSIKKGGWTEEEDRILVEYQEKLGNRWCEIAKVLPGRSENAVKNRWNSAMRR 143          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A7S3LND3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LND3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.340e-34
Identity = 53/127 (41.73%), Postives = 79/127 (62.20%), Query Frame = 0
Query:    2 QEWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWN 128
            + W +I+   +   R+  QC   W+ VL+P L+KG W+ EED  +  CI  G+  WSE+AS++P R  K CRERW +HLDP +  G+WT EE+ +L  A   +G  W+ +A  +PGRTE  ++ +WN
Sbjct:   30 KNWKRIS--LVVPGRSDVQCLHRWQKVLRPGLVKGPWTKEEDDTVRRCIETGIKKWSEIASYVPGRIGKQCRERWFNHLDPTILKGSWTKEEDEKLFKAQAEYGNRWSFIATLIPGRTENAVKNRWN 154          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A835Z2Q0_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q0_9STRA)

HSP 1 Score: 124 bits (310), Expect = 9.620e-34
Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 0
Query:   15 SRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWNA 129
            ++T +QC   WR  L+P + KG W  EEDA + D + RG   WSE A  +P R AK CRERW HHLDPA+S   +TP E+  +++   A G  W  +A +LPGRTE  ++ +W A
Sbjct:   30 TKTATQCMQRWRRALQPDMRKGRWRDEEDALLLDLMTRGHDSWSEFARHIPGRSAKQCRERWRHHLDPAVSRARFTPAEDAVVVAMQAARGNAWARIAARLPGRTENTVKTRWTA 144          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A2R5GS76_9STRA (Transcription factor MYB3R-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GS76_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.860e-33
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 0
Query:    2 QEWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSAVEAHGTNWNMVAR-QLPGRTELIIQQQWNAIVLR 133
            + W +IA ++L  +RT  QC   W+ VL+P L+KG W PEED  I  CI  G++ WSE+A+ +P R  K CRERW +HLDP + +  WT EE+  L+      G  W+ +A+  LPGR E  ++ +WNA   R
Sbjct:  154 RNWKRIASEYLADTRTDVQCLHRWQKVLRPGLVKGPWQPEEDETIRACIRSGITRWSEIATRVPGRIGKQCRERWFNHLDPNIRTDEWTEEEDQLLIEGQSKLGNKWSQIAKIYLPGRPENAVKNRWNAATRR 286          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A2R5G768_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G768_9STRA)

HSP 1 Score: 131 bits (329), Expect = 8.330e-33
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    3 EWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWNAIVLR 133
            +W KI+ ++L   R+  QC   W+ VL+P L+KG W+ EED  I  CI R ++ WSE+A  +P R  K CRERW +HLDP +    WT EEE  L++A    G  W  +A+ LPGR E  ++ +WN+ + R
Sbjct:  194 KWKKISEEYLGGRRSDVQCLHRWQKVLRPGLVKGPWTEEEDNMIRACIERKITKWSEIAERIPGRIGKQCRERWFNHLDPTIDHSAWTEEEEKVLVTAQATFGNRWCEIAKLLPGRPENAVKNRWNSAIRR 324          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A5A8DBZ9_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DBZ9_CAFRO)

HSP 1 Score: 128 bits (321), Expect = 1.170e-32
Identity = 53/132 (40.15%), Postives = 83/132 (62.88%), Query Frame = 0
Query:    2 QEWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWNAIVLR 133
            + W +I+ ++L+  RT  QC   W+ VL+P L+KG W+ EED  I +CI  G++ WSE++  +P R  K CRERW +HLDP++    W+ EE+  L  A  + G  W  +A+ LPGR+E  ++ +WN+ + R
Sbjct:   29 KNWKRISEEYLQGRRTDVQCLHRWQKVLRPGLVKGPWTTEEDQVIVNCINAGITKWSEISERIPGRIGKQCRERWFNHLDPSIKKDPWSAEEDRILEEAQCSIGNKWCEIAKLLPGRSENSVKNRWNSAMRR 160          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A7S0VPJ2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VPJ2_9CRYP)

HSP 1 Score: 120 bits (302), Expect = 6.050e-32
Identity = 54/133 (40.60%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    2 QEWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIAR-GVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWNAIVLR 133
            + W K+A +     RT  QC   W+ VL P L+KG W+ EED  +   + R G + WS +ASFLP R  K CRERW++HL+P +    W+ EE+  ++ A   HG  W  +A  LPGRT+  I+  WN+ + R
Sbjct:   60 KSWKKVAEEL--KFRTDVQCLHRWQKVLNPELIKGPWTKEEDDTVVKLVHRHGPTKWSLIASFLPGRIGKQCRERWHNHLNPDIRKEEWSVEEDCTIIHATRVHGKKWARIANFLPGRTDNAIKNHWNSTMKR 190          
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Match: A0A7S0LVI9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LVI9_9CRYP)

HSP 1 Score: 123 bits (308), Expect = 6.730e-32
Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 0
Query:    2 QEWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCIAR-GVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSAVEAHGTNWNMVARQLPGRTELIIQQQWNAIVLR 133
            + W K+A       RT  QC   W+ VL P L+KG WS EED  +   + + G   WS +ASFLP R  K CRERW++HL+P +    WT EE+  +++A   HGT W  +A  LPGRT+  I+  WN+ + R
Sbjct:   53 KNWKKVAEGL--EGRTDVQCLHRWQKVLNPDLVKGPWSKEEDDTVMHLVHKYGPKKWSLIASFLPGRIGKQCRERWHNHLNPDIKKECWTQEEDALIINAHRVHGTKWAKIAALLPGRTDNAIKNHWNSTMKR 183          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8325.15963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ10_9PHAE1.710e-6671.64MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LKA8_ECTSI1.300e-6370.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5GBT4_9STRA5.280e-3543.18Transcription factor MYB3R-2 n=1 Tax=Hondaea ferme... [more]
A0A7S3LND3_9STRA4.340e-3441.73Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A835Z2Q0_9STRA9.620e-3445.22Homeodomain-like protein (Fragment) n=1 Tax=Tribon... [more]
A0A2R5GS76_9STRA1.860e-3342.86Transcription factor MYB3R-2 n=1 Tax=Hondaea ferme... [more]
A0A2R5G768_9STRA8.330e-3342.75Transcription factor MYB3R-4 n=1 Tax=Hondaea ferme... [more]
A0A5A8DBZ9_CAFRO1.170e-3240.15Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S0VPJ2_9CRYP6.050e-3240.60Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0LVI9_9CRYP6.730e-3242.11Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 85..133
e-value: 6.7E-11
score: 52.2
coord: 34..82
e-value: 6.5E-8
score: 42.3
NoneNo IPR availableGENE3D1.10.10.60coord: 33..85
e-value: 1.4E-17
score: 65.2
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 38..97
e-value: 6.2E-14
score: 52.0
NoneNo IPR availableGENE3D1.10.10.60coord: 88..133
e-value: 6.3E-13
score: 50.4
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 3..68
coord: 55..130
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 30..84
score: 17.454
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 85..133
score: 11.111
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 1..29
score: 5.982
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 32..127
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 3..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8325contigH-elongata_contig8325:6661..7059 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8325.15963.1mRNA_H-elongata_contig8325.15963.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8325 6661..7059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8325.15963.1 ID=prot_H-elongata_contig8325.15963.1|Name=mRNA_H-elongata_contig8325.15963.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
MQEWNKIAHDFLKSSRTGSQCATHWRMVLKPSLLKGVWSPEEDAAIFDCI
ARGVSDWSEVASFLPKRKAKHCRERWNHHLDPALSSGNWTPEEETQLLSA
VEAHGTNWNMVARQLPGRTELIIQQQWNAIVLR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf