prot_H-elongata_contig83154.15952.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83154.15952.1
Unique Nameprot_H-elongata_contig83154.15952.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: D7FRX3_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRX3_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 6.650e-73
Identity = 112/133 (84.21%), Postives = 122/133 (91.73%), Query Frame = 0
Query:    1 MCRQEGEEWASKGSHGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            MCR  G EW +KGSHGRHSMV+VP+D PGV +VRALKVFGYDDAPHGHAEVELR+VRVPLSSI+LGEGRGFEIAQ RLGPGRVHHCMRAVGMAERALAAH++R+R RV FGK LSEDSLVRHHVA+SRMEI Q
Sbjct:  181 MCRHGGAEWDAKGSHGRHSMVVVPIDAPGVTMVRALKVFGYDDAPHGHAEVELRNVRVPLSSILLGEGRGFEIAQGRLGPGRVHHCMRAVGMAERALAAHVQRSRDRVAFGKALSEDSLVRHHVAQSRMEIDQ 313          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: I3TI97_TISMK (Putative acyl-CoA dehydrogenase n=6 Tax=Tistrella TaxID=171436 RepID=I3TI97_TISMK)

HSP 1 Score: 173 bits (439), Expect = 3.240e-50
Identity = 81/119 (68.07%), Postives = 98/119 (82.35%), Query Frame = 0
Query:   15 HGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            H + SMVLVPMDTPGV V+R LKVFGYDDAPHGHAEV   +VRVP+ +I+LGEGRGFEIAQ RLGPGR+HHCMR +G+AERAL +  KR ++R  FGK L+E  + RH++A+SRMEI Q
Sbjct:  193 HSQQSMVLVPMDTPGVTVLRPLKVFGYDDAPHGHAEVLFENVRVPVENILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALESMCKRAQQRTAFGKTLAEHGMTRHYIAQSRMEIDQ 311          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: A0A0K1PZJ7_9DELT (Acyl-CoA dehydrogenase n=1 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1PZJ7_9DELT)

HSP 1 Score: 173 bits (438), Expect = 5.460e-50
Identity = 83/117 (70.94%), Postives = 97/117 (82.91%), Query Frame = 0
Query:   15 HGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEI 131
            H + SMVLVP+DTPGVRVVR L VFGYDDAPHGHAEV   +VRVP S+I+LGEGRGFEIAQ RLGPGR+HHCMRA+G+AERAL A  KR + RV FG+ L+E   +RH +ARSR+EI
Sbjct:  196 HLQQSMVLVPLDTPGVRVVRPLTVFGYDDAPHGHAEVAFENVRVPKSNILLGEGRGFEIAQGRLGPGRIHHCMRAIGLAERALEAMCKRVQERVAFGRPLAEQGALRHEIARSRIEI 312          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: A0A1M3MZ52_9DELT (Acyl-CoA dehydrogenase n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3MZ52_9DELT)

HSP 1 Score: 173 bits (438), Expect = 6.500e-50
Identity = 86/128 (67.19%), Postives = 98/128 (76.56%), Query Frame = 0
Query:    6 GEEWASKGSHGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            G+   S   H + SMVLVPMDTPGV V RAL VFGYDDAPHGHAEV    VRVP ++I+LGEGRGFEIAQ RLGPGR+HHCMR +G+AERALA   KR R RV FGK L+E   +RH +ARSR+EI Q
Sbjct:  194 GKTDPSAPRHAQQSMVLVPMDTPGVEVHRALTVFGYDDAPHGHAEVSFTGVRVPKANILLGEGRGFEIAQGRLGPGRIHHCMRLIGLAERALAFMCKRARERVAFGKPLAEQGALRHEIARSRIEIDQ 321          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: A0A2U1VCM3_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1VCM3_9PROT)

HSP 1 Score: 171 bits (433), Expect = 2.170e-49
Identity = 82/117 (70.09%), Postives = 95/117 (81.20%), Query Frame = 0
Query:   17 RHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            + SMVLVPMD PGVRVVRAL VFGYD APHGHAEVE  DVRVP S+I+LGEGRGFEIAQ RLGPGR+HHCMR +G+AERAL A + R + RV FG+ L+E   +R  +ARSR+EI Q
Sbjct:  193 QQSMVLVPMDAPGVRVVRALTVFGYDHAPHGHAEVEFTDVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRTIGLAERALEAMVARVKERVAFGRPLAEQGTIRQDIARSRVEIEQ 309          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: A0A537UWS8_9PROT (Acyl-CoA dehydrogenase n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537UWS8_9PROT)

HSP 1 Score: 170 bits (430), Expect = 6.630e-49
Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = 0
Query:   15 HGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            H + SM+LVP DTPGV +VRAL VFGYDDAPHGHAEVE +DVRVP+ +I+LGEGRGFEIAQ RLGPGR+HHCMR +G+AER+L A + R + RV FG+ L++  ++R  +A SRMEI Q
Sbjct:  194 HQQQSMILVPRDTPGVTIVRALTVFGYDDAPHGHAEVEFKDVRVPVENILLGEGRGFEIAQGRLGPGRIHHCMRMIGLAERSLEAMVSRVKNRVAFGRPLADQGVIREWIADSRMEIEQ 312          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: UPI001665C392 (acyl-CoA dehydrogenase family protein n=1 Tax=Deinococcus ruber TaxID=1848197 RepID=UPI001665C392)

HSP 1 Score: 169 bits (427), Expect = 2.620e-48
Identity = 82/128 (64.06%), Postives = 98/128 (76.56%), Query Frame = 0
Query:    6 GEEWASKGSHGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            G+   S   H + SM+L+PMD PGV++ R L VFGYDDAPHGHAEV  RDVRVPLS+++LGEGRGFEIAQ RLGPGR+HHCMR +G AERAL   I+R+  RV FGK LSE   VR  +A+SR+EI Q
Sbjct:  189 GKNDPSAPKHLQQSMILIPMDAPGVKIERMLTVFGYDDAPHGHAEVTFRDVRVPLSAMLLGEGRGFEIAQGRLGPGRIHHCMRLIGQAERALELMIERSESRVAFGKKLSEQGTVREMIAKSRIEIDQ 316          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: A0A0N7I2F0_SPHMC (Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis macrogoltabida TaxID=33050 RepID=A0A0N7I2F0_SPHMC)

HSP 1 Score: 168 bits (426), Expect = 2.670e-48
Identity = 80/120 (66.67%), Postives = 95/120 (79.17%), Query Frame = 0
Query:   14 SHGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            +H + SM+LVP+DTPGVR+VR L VFGYDDAPHGHAE     VRVP S+++LGEGRGFEIAQ RLGPGR+HHCMRA+G+AERAL    +R   RV FGK LSE S +R  +A SRMEI+Q
Sbjct:  192 THRQQSMILVPLDTPGVRIVRPLTVFGYDDAPHGHAETIFEQVRVPSSNLLLGEGRGFEIAQGRLGPGRIHHCMRAIGLAERALELMCRRAESRVAFGKPLSEQSSLRERIAESRMEISQ 311          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: A0A836C9V4_9STRA (Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9V4_9STRA)

HSP 1 Score: 168 bits (425), Expect = 3.840e-48
Identity = 82/134 (61.19%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    1 MCRQEGEEWASKGSHGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPL-SSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            M R EG EW ++  H RH+M+LVP  +PGV + RAL+VFGYDDAPHGHAEV LR V V   ++++LGEGRGFEIAQ RLGPGRVHHCMRA+G+AERAL A ++R+R R+ FG+ L +  +VR  +A SRME+ Q
Sbjct:  184 MGRMEGAEWDARPIHQRHTMLLVPARSPGVTLERALEVFGYDDAPHGHAEVTLRGVEVSADAALLLGEGRGFEIAQGRLGPGRVHHCMRALGLAERALTALVRRSRERIAFGRPLCDHDMVRRSIADSRMELDQ 317          
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Match: A0A383F6Y8_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383F6Y8_9ZZZZ)

HSP 1 Score: 163 bits (412), Expect = 3.890e-48
Identity = 75/119 (63.03%), Postives = 93/119 (78.15%), Query Frame = 0
Query:   15 HGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAEVELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAHIKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ 133
            H + SMV+VP+ TPG++V+R L VFGYDDAPHGH EVE +DVRVP S+I+LGEGRGFEIAQ RLGPGR+HHCMR +G+AER+L   +KR + R  FGK L+E   +   +A SRMEI Q
Sbjct:   97 HKQQSMVVVPVGTPGIKVLRTLPVFGYDDAPHGHGEVEFKDVRVPASNILLGEGRGFEIAQGRLGPGRIHHCMRQIGVAERSLEKMLKRVKERTAFGKTLAEQGTIMADIANSRMEIEQ 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83154.15952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRX3_ECTSI6.650e-7384.21Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=28... [more]
I3TI97_TISMK3.240e-5068.07Putative acyl-CoA dehydrogenase n=6 Tax=Tistrella ... [more]
A0A0K1PZJ7_9DELT5.460e-5070.94Acyl-CoA dehydrogenase n=1 Tax=Labilithrix luteola... [more]
A0A1M3MZ52_9DELT6.500e-5067.19Acyl-CoA dehydrogenase n=1 Tax=Myxococcales bacter... [more]
A0A2U1VCM3_9PROT2.170e-4970.09Acyl-CoA dehydrogenase n=1 Tax=Azospirillum sp. TS... [more]
A0A537UWS8_9PROT6.630e-4965.55Acyl-CoA dehydrogenase n=4 Tax=Alphaproteobacteria... [more]
UPI001665C3922.620e-4864.06acyl-CoA dehydrogenase family protein n=1 Tax=Dein... [more]
A0A0N7I2F0_SPHMC2.670e-4866.67Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis macrog... [more]
A0A836C9V4_9STRA3.840e-4861.19Acyl-CoA dehydrogenase n=1 Tax=Tribonema minus Tax... [more]
A0A383F6Y8_9ZZZZ3.890e-4863.03Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.110.10coord: 1..68
e-value: 1.9E-18
score: 68.6
NoneNo IPR availableGENE3D1.20.140.10coord: 69..133
e-value: 2.3E-12
score: 48.8
NoneNo IPR availablePANTHERPTHR45741FAMILY NOT NAMEDcoord: 10..132
NoneNo IPR availablePANTHERPTHR45741:SF1ACYL-COA DEHYDROGENASE FAMILY MEMBER 11coord: 10..132
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 68..132
e-value: 1.5E-12
score: 47.9
IPR036250Acyl-CoA dehydrogenase-like, C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 66..131
IPR009100Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilySUPERFAMILY56645Acyl-CoA dehydrogenase NM domain-likecoord: 12..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83154contigH-elongata_contig83154:491..2665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83154.15952.1mRNA_H-elongata_contig83154.15952.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83154 476..2665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83154.15952.1 ID=prot_H-elongata_contig83154.15952.1|Name=mRNA_H-elongata_contig83154.15952.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
MCRQEGEEWASKGSHGRHSMVLVPMDTPGVRVVRALKVFGYDDAPHGHAE
VELRDVRVPLSSIILGEGRGFEIAQKRLGPGRVHHCMRAVGMAERALAAH
IKRTRRRVVFGKVLSEDSLVRHHVARSRMEIAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009075AcylCo_DH/oxidase_C
IPR036250AcylCo_DH-like_C
IPR009100AcylCoA_DH/oxidase_NM_dom