prot_H-elongata_contig83134.15949.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83134.15949.1
Unique Nameprot_H-elongata_contig83134.15949.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
BLAST of mRNA_H-elongata_contig83134.15949.1 vs. uniprot
Match: D7FKI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI5_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 6.530e-18
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    2 IHVPDIIHSTVMRVASEVEDTRSLAAGLAEVSGQWKPATVKVAEITLVHEKHPYMHL 58
            +H+P+IIHSTVMRVASEV D   L  GLA++  +W+P TV+V +I+LV+EKHPYMHL
Sbjct:  135 VHIPNIIHSTVMRVASEVSDEGRLGEGLADLGARWEPTTVRVGKISLVYEKHPYMHL 191          
BLAST of mRNA_H-elongata_contig83134.15949.1 vs. uniprot
Match: A0A0M0J9H0_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9H0_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 6.370e-6
Identity = 22/56 (39.29%), Postives = 33/56 (58.93%), Query Frame = 0
Query:    3 HVPDIIHSTVMRVASEVEDTRSLAAGLAEVSGQWKPATVKVAEITLVHEKHPYMHL 58
            H+PDI+HST++R  +E +D  + A   A V+  W P  + V     V E+ PYMH+
Sbjct:  177 HIPDIVHSTLVRWTAEPDDRAAAAEAFARVAQSWTPLELTVPRAIAVFERLPYMHM 232          
BLAST of mRNA_H-elongata_contig83134.15949.1 vs. uniprot
Match: A0A1Q9ETY8_SYMMI (Fibronectin type-III domain-containing protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9ETY8_SYMMI)

HSP 1 Score: 48.1 bits (113), Expect = 6.920e-5
Identity = 22/58 (37.93%), Postives = 32/58 (55.17%), Query Frame = 0
Query:    1 AIHVPDIIHSTVMRVASEVEDTRSLAAGLAEVSGQWKPATVKVAEITLVHEKHPYMHL 58
            A H+PDI+HSTV+R  +E  D  +     A+V+  W+P  +       V E  PYMH+
Sbjct:  476 APHIPDIVHSTVLRWTAEPADRAAAQEAFAQVAESWEPVEIIATAPRAVFEDIPYMHI 533          
BLAST of mRNA_H-elongata_contig83134.15949.1 vs. uniprot
Match: A0A813E1X2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E1X2_POLGL)

HSP 1 Score: 46.6 bits (109), Expect = 9.230e-5
Identity = 22/58 (37.93%), Postives = 31/58 (53.45%), Query Frame = 0
Query:    1 AIHVPDIIHSTVMRVASEVEDTRSLAAGLAEVSGQWKPATVKVAEITLVHEKHPYMHL 58
            A H+PDI+HSTV+R  +  ED  +       ++  W+P  V V     V E  PYMH+
Sbjct:   62 APHLPDIVHSTVLRWTAAPEDAVAAREAFERIAASWEPLQVAVPFARWVFEDTPYMHI 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83134.15949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FKI5_ECTSI6.530e-1863.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0M0J9H0_9EUKA6.370e-639.29Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A1Q9ETY8_SYMMI6.920e-537.93Fibronectin type-III domain-containing protein n=3... [more]
A0A813E1X2_POLGL9.230e-537.93Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83134contigH-elongata_contig83134:395..568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83134.15949.1mRNA_H-elongata_contig83134.15949.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83134 395..568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83134.15949.1 ID=prot_H-elongata_contig83134.15949.1|Name=mRNA_H-elongata_contig83134.15949.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
AIHVPDIIHSTVMRVASEVEDTRSLAAGLAEVSGQWKPATVKVAEITLVH
EKHPYMHL
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