prot_H-elongata_contig83040.15941.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig83040.15941.1
Unique Nameprot_H-elongata_contig83040.15941.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
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BLAST of mRNA_H-elongata_contig83040.15941.1 vs. uniprot
Match: A0A6H5K0I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I6_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.270e-13
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 0 
Query:    1 LLLLTGKPGGELLGLEFDRATTAEQDPLEVFFPIDDGLVGRCVYTGLPCQAVSGGSGAGHGG------RHFFSKNGT--ISLSGSADLYGSLPL 86
            LLLL G+PGG +  LE DR    +QDPLE  FPI +GLV RCV TGL  Q   GG+G+  G       R  +S +G   ++L+G ADL+ +LPL
Sbjct:  794 LLLLNGEPGGGMFCLESDRRAPPDQDPLEASFPIGNGLVARCVATGLAFQTRRGGNGSTGGASPPRSSRRLYSTSGALDVALAGPADLH-ALPL 886
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BLAST of mRNA_H-elongata_contig83040.15941.1 vs. uniprot
Match: D7FQ01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ01_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 5.660e-13
Identity = 43/93 (46.24%), Postives = 55/93 (59.14%), Query Frame = 0 
Query:    1 LLLLTGKPGGELLGLEFDRATTAEQDPLEVFFPIDDGLVGRCVYTGLPCQAVSGGSGAGHGG------RHFFSKNGT--ISLSGSADLYGSLP 85
            LLLL G+PGG +  LE DR    +QDPLE  FPI +GLV RCV TGL  Q   GG+G+  G       R  +S +G   ++L+G ADL+   P
Sbjct:  437 LLLLNGEPGGGMFCLESDRRAPPDQDPLEASFPIGNGLVARCVATGLAFQTRRGGNGSTGGASPPRSSRRLYSTSGALDVALAGPADLHALPP 529
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig83040.15941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0I6_9PHAE2.270e-1347.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ01_ECTSI5.660e-1346.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig83040contigH-elongata_contig83040:557..1094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig83040.15941.1mRNA_H-elongata_contig83040.15941.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig83040 557..1094 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig83040.15941.1 ID=prot_H-elongata_contig83040.15941.1|Name=mRNA_H-elongata_contig83040.15941.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
LLLLTGKPGGELLGLEFDRATTAEQDPLEVFFPIDDGLVGRCVYTGLPCQ
AVSGGSGAGHGGRHFFSKNGTISLSGSADLYGSLPLGHHHLYQRRSAEAA
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