mRNA_H-elongata_contig830.15937.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig830.15937.1
Unique NamemRNA_H-elongata_contig830.15937.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 647 bits (1670), Expect = 8.910e-216
Identity = 382/716 (53.35%), Postives = 496/716 (69.27%), Query Frame = 2
Query:   35 IAAVASSELNVYGNVSFQGNYAVADGGAIYASESSVFIKNGTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSAWTLDVDGSGPANVTGCTFDNNQAMDGGAIYSTAGYDMVVNSYFSRNFAEVQGGALLHSGVLVALTQSSFELNRAGEAGLAIMSLGLAMNITAVAFRNSSFFCGSGEYGFE-DSGKD--SDTCRLAVICSRCDIDCIKVPASISL-DEATVPVCEVVPAGANLT-TRGMTLDTLALTRGYYRTSSQSRDVLRCYKKEACIGGSNASNYCAQGYAGPYCAACEDGFTSGFQYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRIEDRPIPDGGGRWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMA-GFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALLSALQG 2164
            IA    S L++ G + F+ N A  +GGA     S+V  + GT     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S +  D  GSG  N T C F  N A+DGGA+YS AGYD + +  F  N A   GGA LHSGVLV L +S+F  NRA +AGLA+ SLG+A NIT   F +++++C SG+YG+E + G+D  S TCR  V+CS C   C   P S+ + ++A VP+CE    G + +   G+TL  L L RGYYRTS++S++VL+CY++EACIGG++ S YC +GY G YCA C++G+ SG+Q+SC +C G N  +A+G + A+  VAL    L++  LVR+ D   PD    W +RL   R  IV+++P  +IKIVVVAWQI+TQFS VV V YP +YE FLA L+VVN +LG +LS++C+++ NFY RL   T+GP+ V GGLA  Y  + +RN HS   M+  K+KHLSIALF+ F+VYSSVS+ IFQTFVC+ LD GV YLRADY L CST  HTA M YAG M+LVYPVGIP V++WWL +NR+++          G       +   +DLW+ YK  RYY+EV+ECGRR+ALTGL  F+ P S AQVAIE ++A +F A S++LSPFADP D WLYR+G W+I+ SMYLALLLK D +DE+S +Q+ FA +LIAAH GMV ++   A+LS  +G
Sbjct:  351 IAVTGGSSLSISGPIPFRYNKAQENGGAXXXXXSTVVTEEGTLFDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLFDDDDPGSGSVNATMCVFQGNSAVDGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDTASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQFSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDHLQPMRDLWSSYKPRRYYFEVLECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLSVRRG 1066          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 484 bits (1247), Expect = 8.630e-154
Identity = 275/644 (42.70%), Postives = 379/644 (58.85%), Query Frame = 2
Query:  296 GSAWTLDVDGSGPANVTGCT--FDNNQAMDGGAIY--STAGYDMVVNSYFSRNFA---------------------EVQGGALLHSGVLVALTQSSFELNRAGEAGLAIMSLGLAMNITAVAFRNSSFFCGSGEYGFEDSGKDSDTCRLAVICSRCDIDCIKVPASISLDEATVPVCEVVPAGANLTTRGMTLDTLALTRGYYRTSSQSRDVLRCYKKEACIGGSNASNYCAQGYAGPYCAACEDGFTSGFQYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRIEDRPIPDGGGRWER-RLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALL 2149
            G A  L   G  P     CT  FD+N A+DGGA+Y  +  G ++V N  F  N A                     E+ GG + H+G L  + ++ F  N AG+ G A+ S+G+      VAF +++  C  GE  ++   +D D+CR  + C+RC  DC  +P+S+++ ++T+PVC     G   ++ G T+ TL L  GYYRTS++S+ V+ CY   AC GG++  NYCA GY GPYC+ C DG+  G  Y CH C G++  +AVG A            ++   LVR+ D        R  + RL  F   +V + P   +KIVVVAWQIITQF  +    YP  Y+ FL AL+ VNL++G ILS +CV+ T+F++RL++ATIGP+ VL  LA+ +     RN  S  A++ VKNKHLS ALF++F +YSSVS+T+FQTFVCD LD GV+YLRADY L C T  + AF  YA  MV VYP+GIPA FAW L +NR +++ AD   +A  Q          DLW  YK +RYYYE++E  RR+ LTG+ VF+ PGS AQ+A+  L+AV+F   SE LSPF   +D  LYR G  V+  S+Y+ALLLK +V++E S   S F V+LI A+  M   L   + L
Sbjct:  391 GGAIALTSTGEEPTQFEACTCTFDSNSAVDGGALYMSTNGGMEVVRNCNFYGNRAGESIERKASRTDDVQAALQRVEISGGTIFHTGHL-GMIETVFASNEAGQDGTAVFSMGVVQKALNVAFASNTLNCPPGENAYDKEAED-DSCRFELACARCSADCDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVDGDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLANLQP-------LGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCMAITLVVQSFL 1025          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 504 bits (1297), Expect = 1.110e-153
Identity = 274/622 (44.05%), Postives = 367/622 (59.00%), Query Frame = 2
Query:  314 DVDGSGPANVTGCTFDNNQAM-DGGAIYSTAGYDMVVNSYFSRNFAEVQGGALLHSGVLVALTQSSFELNRAGEAGLAIMSLGLAMNITAVAFRNSSFFCGSGEYGFE-----DSGKDSDTCRLAVICSRCDIDCIKVPASIS--LDEATVPVCEVVPAGANLTTRGMTLDTLALTRGYYRTSSQSRDVLRCYKKEACIGGSNASNYCAQGYAGPYCAACEDGFTSGFQYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRIED--RPIPDGGGRWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALL 2149
            + D S P     C F++N A+ DGGA+YS A +DM+  S F +N                                                  ++ F+C  GE+G E     D    +D CR   +CSRC  +C     S +  +D  T+P CE  P G+  T RG TL TL +  G+YR+S  S D+  C+ K+AC GGS    YCA+GY GPYCA C  G++ G+  +C  C G +K +A+  A A+  +AL     LV  LV + +   P   G   W R    ++  + +++P  A+KIVVV WQI+TQ+S V  V+YP  Y+ FL+ + VVNL+LG ILS ACV +TNFY+RL++ATIGP+ VLG L   Y  A  RN H   AM+ V+ +HLS+ LF++F++Y++VSYTIF+TFVCD LD G +YLRADY L C T  HTA+  YAG  VLVYPVGIP VF WWLF NR+E++  D  + A        +  A DLW PYK + YYYEVVEC RR+ALTG  VFIYP S AQVAI  L+A +F   SEILSPFA P++ WLYR+G +V++ SMYLALLL+ DV+DE   +Q VF+ +++ AH  M  ++ A  LL
Sbjct:  419 EEDPSTPVKFLDCLFESNDALEDGGALYSVASFDMIRGSKFFQNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQEDRESQA-------ELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLL 1033          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 2.220e-148
Identity = 270/614 (43.97%), Postives = 356/614 (57.98%), Query Frame = 2
Query:  332 PANVTGCTFDNNQAM-DGGAIYSTAGYDMVVNSYFSRNFAEVQGGALLHSGVLVALTQSSFELNRAGEAGLAIMSLGLAMNITAVAFRNSSFFCGSGEYGFEDSGKDSDTCRLAVICSRCDIDCIKVPASISLDEATV------PVCEVVPAGANLTTRGMTLDTLALTRGYYRTSSQSRDVLRCYKKEACIGGSNASNYCAQGYAGPYCAACEDGFTSGFQYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRI-EDRPIPDGGGRWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALL 2149
            P     C F+ N A  DGGAIYS AG+DMV +S                                                         SF+C  G +  E   +  D CR  ++CSRC  +C    AS   DE TV      P CE VP GA  T+RG TL TL +  GYYR+S+ S D+  C+ ++AC GG     YCA GY GPYCA C  GF+ G+ +SC  C G ++  A    +AV V+ L     +   LV + E  P      RW+++   ++  + + +P  AIKIVVV WQI+TQ+S V  V+YP  Y+ FL+ + VVNL+LG ILSLACV +T+FY+RL+L TI P  VLG L   Y            AM VVK++HLS+ALF++F++Y++VSYTIF+TFVCDPLD G +YLR+DY L C T+ HTA+  YAG M+LVYPVGIP VF WWLF +R+E++       A        +  A DLW PYK + YYYEVVEC RR+ALTG  VFIYP S AQVAI  L+A++F   SE LSPFA P++ WLYR+G +V++ SMYLALLL+ DV+DE + +Q VF+ +L+ AH  M+ ++    LL
Sbjct:  436 PTKFLSCVFEENHASEDGGAIYSVAGFDMVKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFSTEVEIEGEDVCRFGLVCSRCASEC----ASELEDEVTVADPDLLPACEAVPEGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSKAPSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQYSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYL-----------AMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEGRERRA-------VLKPAADLWEPYKPSTYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLL 1027          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 487 bits (1253), Expect = 9.810e-148
Identity = 265/616 (43.02%), Postives = 361/616 (58.60%), Query Frame = 2
Query:  350 CTFDNNQAM-DGGAIYSTAGYDMVVNSYFSRNFAEVQGGALLHSGVLVALTQSSFELNRAGEAGLAIMSLGLAMNITAVAFRNSSFFCGSGEYGFE-----DSGKDSDTCRLAVICSRCDIDC---IKVPASISLDEATVPVCEVVPAGANLTTRGMTLDTLALTRGYYRTSSQSRDVLRCYKKEACIGGSNASNYCAQGYAGPYCAACEDGFTSGFQYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRI-------EDRPIPDGGGRWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALL 2149
            C F++N A  DGGA+YS A +D++  S FS                                                     + F+C  GE+G E     D    +D CR   +CSRC  +C   ++  A + +D  T+P CE  P G+  T RG TL TL +  G+YR+S  S D+  C+ K+AC GGS    YC++GY GPYCA C  G++ G+  +C  C G++K +A+  A A+ ++AL    +LV  LV +       +      G   W R     +  + +++P  A+KIVVV WQI+TQ+S V  ++YP  Y+ FL+ + VVNL+LG ILS ACV +TNFY+RL++ATIGP+ VLG L   Y  A  RN H   AM+ V+ +HLS+ LF++F++Y++VSYTIF+TFVCD LD G +YLRADY L C T  HTA+  YAG  VLVYPVGIP +F WWLF NR+E++  D    A        +  A DLW PYK + YYYEVVEC RR+ALTG  VFIYP S AQVAI  L+A +F   SEILSPFA P++ WLYR+G +V++ SMYLALLL+ DV+DE   +Q VF+ +++ AH  M  ++    LL
Sbjct:  407 CLFESNGASEDGGALYSVASFDVIRGSNFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAEL-VDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQEDREGQA-------ELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLL 1014          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 6.390e-130
Identity = 216/404 (53.47%), Postives = 269/404 (66.58%), Query Frame = 2
Query: 1022 GGATAVLVVALFVFTLLVGYLVRIEDRPIPDGGGRWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELA-MAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALLSA-------------LQGFNEARVVEI 2191
            G A A L+V      L++  LVR+ D           + L   R  I   IP  +IKIV+VAWQI+TQFS VV V YP VYEKFL+ L++VN N G ILS +CV++TNFY RL+ ATIGP+ VLG LA+ Y  + +RN HS   ++  K+KHLSIALF++F+VYSSVS+ IFQTFVC+ LD GV YLRADY L CSTD HTA   YAG M+ VYP GIPA F  WL +NR+++   D            G +   +DLW PYK  RYY+EVVECGRR+ALTGL VFIYPGS AQVA+E + A  F   S++LSPFADPLDAWLYRSG WVI++SM+L LLLK D +DE+S +Q +FA LLI+AH GMV  +A  A+LS              +QGF  A + E+
Sbjct:    9 GIAIAFLLVVSGGVALVIANLVRVVDDDNTGTVSACGKTLNSLRNRIANGIPLTSIKIVLVAWQIVTQFSSVVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEVVECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLSVKGSLVAMRDQPIPIQGFRRASLAEV 412          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 1.140e-117
Identity = 238/604 (39.40%), Postives = 345/604 (57.12%), Query Frame = 2
Query:  332 PANVTGCTFDNNQAMD-GGAIYSTAGYDMVVNSYFSRNFAEVQGGALLHSGVLVALTQSSFELNRAGEAGLAIMSLGLAMNITAVAFRNSSFFCGSGEYGFEDSGKDSDTCRLAVICSRCD--IDCIKVPASISLDEATV-PVCEVVPAGANLTTRGMTLDTLALTRGYYRTSSQSRDVLRCYKKEACIGG-SNASNYCAQGYAGPYCAACEDGFTSGFQYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRIEDRPIPDGGGRWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETN--FYERLVLATIGPMAVLGGLAIIYRFAMTRN----GHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAH 2110
            PA+  GC F +N A + GG + S  G +  V+S+F  N+A+V GGAL   G    +   +F  N A   GLAI ++G  +NI+   F  ++FFC +GE+      ++ D+ R   +C  C    +C     S S+ EA   P C V          G++L+TL+++RGY+R S+ S  +L CY  EAC+GG +   N C  GY GPYCA CE G+ S   ++C  C  S +   V  A   +V           +L+  E           E+  L  R  +   +P  + KI++V WQI+TQF+    + +P VY+ F+ AL VVN +LGS+++  C  + N  F++RL+++T+GP+ V+GGLA  Y  A  RN    G S   ++ +++KHLS  L + F+VYSSVS T+FQ F CD LD G  YLRADY + C++  H A   YA FM+ +YPVGIP ++A+ L   R       ++ M     +  A +TA DLW PY+  R+YYEV+ECGRRV LTG+VVFIYP + AQVA+  LIA  F    E+L+P+    D WL R G  +++LSM+  LLLK DV+DE + +Q VFA +++A H
Sbjct:  540 PASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADV-GGALQLGGK-TNVDGCAFVANSASSRGLAIAAVGF-VNISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECY----SCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFVVAAAIAVVXXXXXXXXXCAHLISGEVS---------EQSCLHRR--LSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRR-------DVLMDPTADKASAQSTA-DLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGH 1117          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 372 bits (954), Expect = 1.150e-117
Identity = 208/405 (51.36%), Postives = 266/405 (65.68%), Query Frame = 2
Query: 1067 LLVGYLVRIEDRPIPDGGG------RWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMAGFQSEFGAVNTA------KDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALLSA-------LQGFNEARVVEIPMSTRNASQAT 2224
            L++  LVR+ D    DG G      +WER  L  R  I  +IP  AIKI++V WQI+TQF+ VV V+YP +YE+FLAAL++VN NLG  LS  C++ETNFY RL  +TI P+A+LGGLA  +  A   N HS   M+   +KHLSIALF++F +YSSVS+TIFQTF+C+ LD  V YLRADY L CST  HT    YAG MVLVYP+GIPAVFAWWL +NR ++           Q   G   T       KDLW PYK  RY+YE+VECGRR+ LTGL VF++PG+ AQVAIE   A       E+L+PF DP+DAWLYRSG  V++ SMYLALLLK D +DE S +Q VFA +L+AAH  MV  +  ++LLSA       ++   E R V +  +TR++ +A+
Sbjct:    3 LVIVDLVRVVD----DGDGTKSRVGKWER-FLSCRDAIAAAIPLTAIKIILVVWQIVTQFASVVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDL----------VQDRSGGTTTPENLRPMKDLWEPYKPRRYFYELVECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSAKKVGIEAMRKQVEVRDVPVARNTRSSWRAS 392          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 4.340e-116
Identity = 238/621 (38.33%), Postives = 353/621 (56.84%), Query Frame = 2
Query:  332 PANVTGCTFDNNQAM-DGGAIYSTAGYDMVVNSYFSRNFAEVQGGALLHSGVLVALTQSSFELNRAGEAG-LAIMSLGLAMNITAVAFRNSSFFCGSGEY-GFEDSGKDSDTCRLAVICSRCDIDCIKVPASISLDEAT-VPVCEVVPAGANLTTRGMTLDTLALTRGYYRTSSQSRDVLRCYKKEACIGGSNAS-NYCAQGYAGPYCAACEDGFTSGFQYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRIEDRPIPDGGGRWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALLSALQGFNEAR 2179
            P     C F +N+A+  GGA+ + AG D  VNS F  N A   GGAL  +G    +   SF  N + + G  A+ ++G   +++ ++F  + + C  G +   E+SG          IC  C ++C       S +E   VP C      +N +   +TLD L +  GY+R +  S +VL CY  +AC+GG   S +YC +GY GPYCA C  G+T+    +C  C  S++  ++    +V V  L     LV Y V           G  E R  G      R +P  ++KIV+VAWQI+TQF+ V  +++P VY++FL AL + N +LG +LS  CV + +F++RL+++TI P+  L  LA +Y  A   +  S   ++ V +KH+S+ L L F+VY+SVS  +FQTF C+ LD    YLRADY +EC +  H+AF  YAGFM+++Y VGIPA++  +LF +  ++   DE      + +   +    DLW PY+ + +YYEV+EC RRV L G+VVFIYP + AQ+A+  LIAV+F   SE L+P+A   D WL R G  V+ +SMY+ALLLK DV+DE + +Q VF  LL+AAH  MV ++    ++ A+  + E R
Sbjct:  370 PTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGT-GGALRLAGT-AEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGT-----LYEAICDGCPVEC----EGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKC--SDRAGSIALGVSVSVAGLLFTVALVSYAV----------SGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDS-DVLRRDEAD----REQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKR 962          
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 8.790e-116
Identity = 238/617 (38.57%), Postives = 342/617 (55.43%), Query Frame = 2
Query:  314 DVDGSGPANVTGCTFDNNQAMD-GGAIYSTAGYDMVVNSYFSRNFAEVQGGALLHSGVLVALTQSSFELNRAGEA-GLAIMSLGLAMNITAVAFRNSSFFCGSGEYGFEDSGKDSDTCRLAVICSRCDIDCIKVPASISLDEATVPVCEVVPAGANLTTRGMTLDTLALTRGYYRTSSQSRDVLRCYKKEACIGG-SNASNYCAQGYAGPYCAACEDGFTSGFQYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRIEDRPIPDGGGRWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKFLAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFAMTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGVAYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIENADELAMAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVVFIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSMYLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALLSA 2155
            D  G  P     C F  NQA+  GGAI S AG D + NS F  N A   GGAL  +G    ++  SF  N + E  G A+ ++G   +IT  +F  + F C +G +       D        IC+ C+  C      +  + +  P+C  V   +      +TL TL++ RG++R S+ S +VL CY  +AC+GG + AS YC +GY GPYC  C DG+T    ++C  C  ++     GG    +V+AL +  L V  +  +    +  G      R  G   ++ R IP  ++KIV+V+WQI+TQF+ V  V YP VY+  L  L V N +L  +LS  CV++ NF+ RL+++TI P+  L  LA  Y  A   N      + ++ NKH+++ L L F VYSSVS T+F+ F CD LD    YLRADY +EC++  H     YAGFM+++Y VGIPA++A  LF +R  +++ D       + E   V +  +LW PYK   +YYEV+EC RRV L G+VVFIYP + AQ+A+  LIA  F   SE L+P+A   D W+ R G  V++LSMY+ALLLK DV+DE + +Q VF  +L+A H  M+  +   A + A
Sbjct:  897 DESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGT-GGALRLAGEAY-ISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVD----HFEAICNGCETTC---DGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSA----GGIAVAVVLALLIVFLAVAVVSYVTSGEVGMG------RKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDP-----DREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQA 1489          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig830.15937.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE8.910e-21653.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSF5_9PHAE8.630e-15442.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI1.110e-15344.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTU5_ECTSI2.220e-14843.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE9.810e-14843.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF7_ECTSI6.390e-13053.47Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
A0A6H5JWT9_9PHAE1.140e-11739.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHA3_9PHAE1.150e-11751.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Z8_ECTSI4.340e-11638.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0E9_9PHAE8.790e-11638.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig830contigH-elongata_contig830:575..5872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score499.6
Seed ortholog evalue2.2e-138
Seed eggNOG ortholog2880.D7FTT9
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size2372
Cds size1926
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931236.9649959-UTR-H-elongata_contig830:574..6471622931236.9649959-UTR-H-elongata_contig830:574..647Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig830 575..647 -
1691679754.2718475-UTR-H-elongata_contig830:574..6471691679754.2718475-UTR-H-elongata_contig830:574..647Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig830 575..647 -
1622931237.0735822-UTR-H-elongata_contig830:4202..43001622931237.0735822-UTR-H-elongata_contig830:4202..4300Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig830 4203..4300 -
1691679754.335832-UTR-H-elongata_contig830:4202..43001691679754.335832-UTR-H-elongata_contig830:4202..4300Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig830 4203..4300 -
1622931237.0963018-UTR-H-elongata_contig830:4570..47321622931237.0963018-UTR-H-elongata_contig830:4570..4732Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig830 4571..4732 -
1691679754.3471203-UTR-H-elongata_contig830:4570..47321691679754.3471203-UTR-H-elongata_contig830:4570..4732Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig830 4571..4732 -
1622931237.1165814-UTR-H-elongata_contig830:5759..58721622931237.1165814-UTR-H-elongata_contig830:5759..5872Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig830 5760..5872 -
1691679754.3592923-UTR-H-elongata_contig830:5759..58721691679754.3592923-UTR-H-elongata_contig830:5759..5872Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig830 5760..5872 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931236.980111-CDS-H-elongata_contig830:647..17211622931236.980111-CDS-H-elongata_contig830:647..1721Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 648..1721 -
1691679754.28402-CDS-H-elongata_contig830:647..17211691679754.28402-CDS-H-elongata_contig830:647..1721Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 648..1721 -
1622931236.9983108-CDS-H-elongata_contig830:1878..21681622931236.9983108-CDS-H-elongata_contig830:1878..2168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 1879..2168 -
1691679754.2940426-CDS-H-elongata_contig830:1878..21681691679754.2940426-CDS-H-elongata_contig830:1878..2168Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 1879..2168 -
1622931237.017087-CDS-H-elongata_contig830:2521..28101622931237.017087-CDS-H-elongata_contig830:2521..2810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 2522..2810 -
1691679754.3043287-CDS-H-elongata_contig830:2521..28101691679754.3043287-CDS-H-elongata_contig830:2521..2810Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 2522..2810 -
1622931237.039528-CDS-H-elongata_contig830:3705..39021622931237.039528-CDS-H-elongata_contig830:3705..3902Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 3706..3902 -
1691679754.3151157-CDS-H-elongata_contig830:3705..39021691679754.3151157-CDS-H-elongata_contig830:3705..3902Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 3706..3902 -
1622931237.054564-CDS-H-elongata_contig830:4126..42021622931237.054564-CDS-H-elongata_contig830:4126..4202Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 4127..4202 -
1691679754.3253708-CDS-H-elongata_contig830:4126..42021691679754.3253708-CDS-H-elongata_contig830:4126..4202Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig830 4127..4202 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig830.15937.1prot_H-elongata_contig830.15937.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig830 648..4202 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig830.15937.1

>prot_H-elongata_contig830.15937.1 ID=prot_H-elongata_contig830.15937.1|Name=mRNA_H-elongata_contig830.15937.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=642bp
MDGGAIYSTAGYDMVVNSYFSRNFAEVQGGALLHSGVLVALTQSSFELNR
AGEAGLAIMSLGLAMNITAVAFRNSSFFCGSGEYGFEDSGKDSDTCRLAV
ICSRCDIDCIKVPASISLDEATVPVCEVVPAGANLTTRGMTLDTLALTRG
YYRTSSQSRDVLRCYKKEACIGGSNASNYCAQGYAGPYCAACEDGFTSGF
QYSCHMCQGSNKWAAVGGATAVLVVALFVFTLLVGYLVRIEDRPIPDGGG
RWERRLLGFRCMIVRSIPFPAIKIVVVAWQIITQFSGVVRVQYPPVYEKF
LAALSVVNLNLGSILSLACVLETNFYERLVLATIGPMAVLGGLAIIYRFA
MTRNGHSIRAMKVVKNKHLSIALFLLFIVYSSVSYTIFQTFVCDPLDSGV
AYLRADYGLECSTDAHTAFMTYAGFMVLVYPVGIPAVFAWWLFTNRYEIE
NADELAMAGFQSEFGAVNTAKDLWTPYKRNRYYYEVVECGRRVALTGLVV
FIYPGSMAQVAIEALIAVLFNAASEILSPFADPLDAWLYRSGTWVIYLSM
YLALLLKADVTDEESYNQSVFAVLLIAAHGGMVFLLAANALLSALQGFNE
ARVVEIPMSTRNASQATSSVLWSENNIFALEKCKSDDRQYI*
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mRNA from alignment at H-elongata_contig830:575..5872-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig830.15937.1 ID=mRNA_H-elongata_contig830.15937.1|Name=mRNA_H-elongata_contig830.15937.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5298bp|location=Sequence derived from alignment at H-elongata_contig830:575..5872- (Himanthalia elongata Himel1 dioecious)
AGTCATAATCGACTGCTCTAATATTGCAGGTGCAATTGCCGCTGTTGCCA GCAGCGAATTGAATGTCTACGGCAACGTTTCGTTTCAGGGTAACTACGCC GTTGCTGATGGAGGTGAGGATAAATTAGAAGATTTTTAGCTATACGAACC TGAACGGTGTTCACAGCGCTTTTCGGGGGTGGCGTGAACTCCCTTAGGGA TTTTCACGCGATTCCTCAATCTTTTGGGGGCTTTGAATGCACAACTAGTT CGAGTGTGACGACTTCGAGAATCGTCCAAAGAAACAACCACCGCGTACCG CTTCATTGAAGCTATTCTCTCAACTTGCCTGTTGCTTTGTTTTGTTTACG AGAAACAAAGCTAAGTGTTGTTTGGAAAACCTACCGTATAAAACAGCCAC ATTTCATCCTCTGGCCGATTATCCGCAATTTTGGAATGTGTTGAACTTTC TCCTAAAATTGGTACGATTTCCGTGGAATCCGGGAATGTGAGCCTGGAAA GCTGGGTGTCCTTTGCACGCAATGCCGTGACCCAAAACGTATGTGTGGGA GACAAAGCGAATTCCTTTCTCAATACGTCTCTTGGTGACTCAAATCTCCT TCGCTACCGTGGAGCGTGCGGACGCCAGATCTGCGAGATATAGCCTCGCA ATTCACCTTCGAAGAATTGATCGGCGGTCTGGACAAATAATCCTTGACTA TGAACCCGTCGAATACCACAATGTCCCGGAGTATAATAAAATCGGAAATA ATGTAGTATATTCCACAACGTAACTGACAGTGAAAAAGACCACAACGCAT CACCTACAATACTGGGTCCGTAGTCAGTCGTTTAATAGATTGTGCGATTG TCTTGACAATGGAGAGCATCATACATGTCGACGGGTTGACGTGGGTTTTT TTAACAACGAGGCAAACGACAGTGGAGGTGTAGTACACAGCTAACGAAAA GTAGTAAACCAAGCACTATCAGCCTCTCCGCCGGGGTTTAGAGCATTAAA ATAGCACCAATCTCCCGTATGAAGCATGTTTGTCTTCCCGCTCGCTTTGC GGGTACTCATCGGCAGGGTGAGTCGTACATTAGGGCCACGCACTCAAGCT TGGTCGCGTGCGAACGTCATCACACGTCTCCTATCCCCAGGTGCTATCTA CGCCAGTGAATCTTCGGTTTTTATTAAGAATGGGACACAGTTCGTGTCCA ACGTCGCTTCCACCGGCTCCGGGGGCGGCGTGTATTCTTCAAAGGCCGTC GTGACTTTAAACGGGGCAACATTCACTGGAAATCATGGCGTCTGGGGTGG AGGTAGATTGACACTACAGACCTAGAAGCGAAATGTGTCGTGGAGGGTGG GAGTTTCAACACTGCATCTACAGTATATCGCCAAGTAGCATTGTCATAGC CATAGGGCTACAATATATCGCAGCGATAGATCTGTGTTGCCGAATTCTAC CTAGAGCTCTCAATCTTGTTTAAGCCTCGACTGCCAAACAAATGGAAATG GAAGATCTTCACGCAGCTAACCTGCTCCTGTAAAACGTTCAACAGAAACC ACCCCACAACATCCACAATCAGGTGTTGCACATTTTTCATCGGGATCCGC GTGGACCCTCGACGTTGATGGTTCTGGTCCCGCCAACGTTACGGGTTGTA CGTTTGACAACAATCAGGCCATGGACGGAGGGGCCATATATAGCACTGCG GGTTACGACATGGTCGTGAATTCATATTTCTCTCGAAACTTTGCAGGTAT TTCCTGAGTTGGGAATCTTGAGGGATCCGGTCGCGGAACTCCTCAGAGCG ACTACGCGTCGAGCAGATCACAGTAACTAAGCCCTAATGGGTCGTAATTT TGGGTAATCATGTCCAGGTTCCCTAAATTTAGCCCCGCTCGTTTTTCGTC CGCATTCATATTCGCTATTCGCCCTTCTTCTCTCACGAGCGGTGTATTTT CGTGATTTTTTCCGCTTTAGAGGTGCAAGGCGGTGCCCTCCTGCACTCCG GCGTACTAGTGGCGTTGACCCAGAGCTCCTTTGAATTGAACAGGGCTGGC GAGGCCGGGCTTGCAATAATGAGCCTCGGGCTTGCAATGAACATCACAGC CGTAGCGTTCCGAAACAGCTCCTTCTTCTGTGGCTCTGGCGAGTACGGCT TTGAGGACAGCGGCAAGGTGATCGCTTGAAAGAGGTTTTTCAGTCAACTG CTCAAACTTCAAATCGAAGAGTCGCAGGGTGATTCCTCCCTCGTCGTTTA TCGAGGTCATTTCATGTCCAGTAGGGGAGGTCTATTGCTTGGGTCTATTT TGTCCTCCTCTTTTAGGAACGGTCTTGTCATTGGAAAACTATGTCGCCTC TCAATCTGACTTTGCATTGATCTAGTATTTATCTTGGCGCAGCAATCATG GTTTACCCACGTACACCTGAGCCCGCAATGCAGTGCGTGGATATATTTTA GGTCGAATTTGGCCCTGAATGATACCGTCGCCAGTCGCCACAACTCAATA CACTGTAACGTTTCCAGAGTGTTACTTGTTATAAGGACTAATTACCGAGT TGTAATCGTCAATTGACTTTTACGCTGTGGTGTAATGGTTAACTTATCAC ATTTGGCGTCGACGTGGACTGGTGTTCAACTCCCGCTGAGCTAGCTTCTT TTACTCACCGAATTCCTCGGCAGAATATCGGTTGAGGACTAAAAATTAAA AAGTATTACCTAGCCAAATTCCTGAGAAGAATATCAGTTGGAGATAAGAT TATATTACTTCGTTCAAAGAAAGCGATAATGCTCCTTACCTACACTGCCC CCCCCCTACACTCAAAACCTTATCGAATTAACTATCAATGGTGACCTCTA TCACCAGATAGTCAAATTCTGTGAGTGGAGAGTGTTATAAGGACTAATTA CCGAGTTGTAATCGTCAATTGATTTTTAAGCTGAGGTGTAATGGTTAACC TTATCACATACTTCCATCACATGGCGTATTTCACGTCAGTAACGCAATCG CCATACCACATTTAATAATACAGACGGGCTGCCCCTACCTCGCCAATCAT CCCCCTCCCCAGGATTCCGATACCTGCCGTTTGGCGGTCATCTGCTCTCG GTGCGACATCGATTGTATCAAAGTCCCTGCGAGCATTTCCTTAGACGAAG CCACGGTACCAGTTTGTGAGGTTGTCCCCGCAGGTGCGAACTTAACAACG AGAGGAATGACCCTCGACACGCTAGCCCTCACACGCGGGTACTACCGAAC ATCGAGCCAAAGCCGAGACGTCCTGAGGTGCTACAAAAAGGAGGCTTGTA TTGGAGGTTCAAACGCCAGTAACTACTGCGCACAGGGTTACGCAGGCCCA TGTGAGCGTTCTCTGTGAAATTATATCTCGAAACGTAGTGCTCTGTACAA CTGGCGCATGTTCGCTGTGGTATGTGGAGAAGTCGCAGTGCCGGTAAAAA CACCTGTTCTACAACAGAAGCCAGGTGACTGCATAAGAAAAACTGAGGCG TCAACCTTGAGAGCTGATTTCATGAAATGACAGAGTTGCTTTGTACAATT AGTATGACTTCCCGTGATTGGGTTGCAGTCTACCTCCGGCTCGCTTGAGC TGGTGACAGAGCCCTAACGTATACTTCACCTCGATGATATCACGTCTCTC TGAATGGATCGCCTGCTCCTTCTTCGTGGTACATGTACGTCTCATTCTCA AAAGATTGTGCTGCTTGCGAAGACGGGTTCACCTCCGGGTTTCAGTACAG CTGCCACATGTGTCAAGGGTCTAACAAATGGGCCGCCGTCGGTGGAGCTA CGGCGGTCCTTGTCGTCGCATTATTCGTGTTCACTTTATTGGTGGGCTAC CTTGTTCGCATCGAGGACCGCCCCATTCCCGATGGGGGCGGAAGATGGGA GAGGCGTCTTTTGGGCTTCAGATGCATGATCGTACGCTCGATCCCGTTCC CAGCTATCAAGATCGTGGTGGTTGCGTGGCAGATCATCACGCAGGTAAAG TTTATTGTTCGCGAGTAAATGACAGCCATATTATACCGCAAGATATTTAG TGCAAGAACTGGTGAATGCATGAGACCAGATGAGAGGGGCGCGTTTCTTC TCATTCCACGCTTCCATGCTTCGGACTGTTAATCTCTTCTAAATTGCACA GTTTTCTGGCGTGGTACGCGTCCAGTACCCTCCGGTGTACGAGAAATTCC TGGCAGCTCTGAGCGTTGTCAATCTGAATCTTGGGTCCATTCTGTCGCTC GCGTGCGTCTTGGAGACCAATTTTTACGAACGCCTCGTTTTGGCGACTAT CGGACCGATGGCAGTGCTTGGTGGGCTAGCAATTATCTACCGGTTCGCCA TGACAAGGAATGGTCACTCGATCCGTGCGATGAAAGTGGTAAAGAACAAG CACCTCTCCATTGCGCTCTTTTTACTCTTCATAGTGTACTCTTCTGTGTC GTACACGATCTTCCAGACGTTCGTCTGTGATCCTCTGGACTCCGGAGTCG CCTATCTGCGCGCCGATTACGGTCTTGAGTGCTCGACCGATGCTCACACG GCCTTCATGACGTACGCCGGGTTCATGGTGCTCGTGTATCCAGTCGGAAT CCCGGCCGTATTTGCTTGGTGGCTGTTTACCAATCGATATGAGATCGAGA ACGCAGATGAACTAGCTATGGCCGGGTTTCAGTCAGAGTTTGGAGCTGTA AATACTGCTAAAGATCTATGGACGCCGTACAAGCGGAACCGCTACTACTA CGAAGTTGTCGAGTGCGGTCGACGGGTTGCACTTACTGGCCTTGTCGTCT TTATCTACCCCGGCAGCATGGCGCAAGTGGCAATCGAAGCGCTGATTGCG GTCTTGTTCAACGCCGCGTCCGAGATTCTAAGCCCATTCGCCGACCCCTT GGATGCATGGTTGTACCGTTCCGGGACATGGGTAATATATCTCAGCATGT ACCTCGCGCTACTTCTGAAGGCAGACGTCACGGACGAGGAGAGCTATAAT CAGAGTGTGTTCGCCGTACTGTTGATCGCCGCTCACGGTGGTATGGTATT CTTATTGGCCGCTAATGCCCTTCTATCGGCGTTGCAAGGGTTTAATGAAG CCCGAGTTGTCGAGATACCAATGTCAACTCGGAACGCCTCTCAAGCGACG AGCTCTGTGCTGTGGAGCGAGAACAATATTTTTGCTCTCGAGAAGTGTAA AAGCGACGACAGGCAATATATTTAGTTTAGAGTTCAGCCCTCCCTGTGGC GCGGGGAACGATAACATGTCCCCAGGTTGTGTGTGTGTGTGTGCGTGC
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Coding sequence (CDS) from alignment at H-elongata_contig830:575..5872-

>mRNA_H-elongata_contig830.15937.1 ID=mRNA_H-elongata_contig830.15937.1|Name=mRNA_H-elongata_contig830.15937.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3852bp|location=Sequence derived from alignment at H-elongata_contig830:575..5872- (Himanthalia elongata Himel1 dioecious)
ATGGACGGAGGGGCCATATATAGCACTGCGGGTTACGACATGGTCGTGAA
TTCATATTTCTCTCGAAACTTTGCAGATGGACGGAGGGGCCATATATAGC
ACTGCGGGTTACGACATGGTCGTGAATTCATATTTCTCTCGAAACTTTGC
AGAGGTGCAAGGCGGTGCCCTCCTGCACTCCGGCGTACTAGTGGCGTTGA
CCCAGAGCTCCTTTGAATTGAACAGGGCTGGCGAGGCCGGGCTTGCAATA
ATGAGCCTCGGGCTTGCAATGAACATCACAGCCGTAGCGTTCCGAAACAG
CTCCTTCTTCTGTGGCTCTGGCGAGTACGGCTTTGAGGACAGCGGCAAGA
GGTGCAAGGCGGTGCCCTCCTGCACTCCGGCGTACTAGTGGCGTTGACCC
AGAGCTCCTTTGAATTGAACAGGGCTGGCGAGGCCGGGCTTGCAATAATG
AGCCTCGGGCTTGCAATGAACATCACAGCCGTAGCGTTCCGAAACAGCTC
CTTCTTCTGTGGCTCTGGCGAGTACGGCTTTGAGGACAGCGGCAAGGATT
CCGATACCTGCCGTTTGGCGGTCATCTGCTCTCGGTGCGACATCGATTGT
ATCAAAGTCCCTGCGAGCATTTCCTTAGACGAAGCCACGGTACCAGTTTG
TGAGGTTGTCCCCGCAGGTGCGAACTTAACAACGAGAGGAATGACCCTCG
ACACGCTAGCCCTCACACGCGGGTACTACCGAACATCGAGCCAAAGCCGA
GACGTCCTGAGGTGCTACAAAAAGGAGGCTTGTATTGGAGGTTCAAACGC
CAGTAACTACTGCGCACAGGGTTACGCAGGCCCATGATTCCGATACCTGC
CGTTTGGCGGTCATCTGCTCTCGGTGCGACATCGATTGTATCAAAGTCCC
TGCGAGCATTTCCTTAGACGAAGCCACGGTACCAGTTTGTGAGGTTGTCC
CCGCAGGTGCGAACTTAACAACGAGAGGAATGACCCTCGACACGCTAGCC
CTCACACGCGGGTACTACCGAACATCGAGCCAAAGCCGAGACGTCCTGAG
GTGCTACAAAAAGGAGGCTTGTATTGGAGGTTCAAACGCCAGTAACTACT
GCGCACAGGGTTACGCAGGCCCATATTGTGCTGCTTGCGAAGACGGGTTC
ACCTCCGGGTTTCAGTACAGCTGCCACATGTGTCAAGGGTCTAACAAATG
GGCCGCCGTCGGTGGAGCTACGGCGGTCCTTGTCGTCGCATTATTCGTGT
TCACTTTATTGGTGGGCTACCTTGTTCGCATCGAGGACCGCCCCATTCCC
GATGGGGGCGGAAGATGGGAGAGGCGTCTTTTGGGCTTCAGATGCATGAT
CGTACGCTCGATCCCGTTCCCAGCTATCAAGATCGTGGTGGTTGCGTGGC
AGATCATCACGCAGATTGTGCTGCTTGCGAAGACGGGTTCACCTCCGGGT
TTCAGTACAGCTGCCACATGTGTCAAGGGTCTAACAAATGGGCCGCCGTC
GGTGGAGCTACGGCGGTCCTTGTCGTCGCATTATTCGTGTTCACTTTATT
GGTGGGCTACCTTGTTCGCATCGAGGACCGCCCCATTCCCGATGGGGGCG
GAAGATGGGAGAGGCGTCTTTTGGGCTTCAGATGCATGATCGTACGCTCG
ATCCCGTTCCCAGCTATCAAGATCGTGGTGGTTGCGTGGCAGATCATCAC
GCAGTTTTCTGGCGTGGTACGCGTCCAGTACCCTCCGGTGTACGAGAAAT
TCCTGGCAGCTCTGAGCGTTGTCAATCTGAATCTTGGGTCCATTCTGTCG
CTCGCGTGCGTCTTGGAGACCAATTTTTACGAACGCCTCGTTTTGGCGAC
TATCGGACCGATGGCAGTGCTTGGTGGGCTAGCAATTATCTACCGGTTCG
CCATGACAAGGAATGGTCACTCGATCCGTGCGATGAAAGTGGTAAAGAAC
AAGCACCTCTCCATTGCGCTCTTTTTACTCTTCATAGTGTACTCTTCTGT
GTCGTACACGATCTTCCAGACGTTCGTCTGTGATCCTCTGGACTCCGGAG
TCGCCTATCTGCGCGCCGATTACGGTCTTGAGTGCTCGACCGATGCTCAC
ACGGCCTTCATGACGTACGCCGGGTTCATGGTGCTCGTGTATCCAGTCGG
AATCCCGGCCGTATTTGCTTGGTGGCTGTTTACCAATCGATATGAGATCG
AGAACGCAGATGAACTAGCTATGGCCGGGTTTCAGTCAGAGTTTGGAGCT
GTAAATACTGCTAAAGATCTATGGACGCCGTACAAGCGGAACCGCTACTA
CTACGAAGTTGTCGAGTGCGGTCGACGGGTTGCACTTACTGGCCTTGTCG
TCTTTATCTACCCCGGCAGCATGGCGCAAGTGGCAATCGAAGCGCTGATT
GCGGTCTTGTTCAACGCCGCGTCCGAGATTCTAAGCCCATTCGCCGACCC
CTTGGATGCATGGTTGTACCGTTCCGGGACATGGGTAATATATCTCAGCA
TGTACCTCGCGCTACTTCTGAAGGCAGACGTCACGGACGAGGAGAGCTAT
AATCAGAGTGTGTTCGCCGTACTGTTGATCGCCGCTCACGGTGGTATGGT
ATTCTTATTGGCCGCTAATGCCCTTCTATCGGCGTTGCAAGGGTTTAATG
AAGCCCGAGTTGTCGAGATACCAATGTCAACTCGGAACGCCTCTCAAGCG
ACGAGCTCTGTGCTGTGGAGCGAGAACAATATTTTTGCTCTCGAGAAGTG
TAAAAGCGACGACAGGCAATATATTTAGTTTTCTGGCGTGGTACGCGTCC
AGTACCCTCCGGTGTACGAGAAATTCCTGGCAGCTCTGAGCGTTGTCAAT
CTGAATCTTGGGTCCATTCTGTCGCTCGCGTGCGTCTTGGAGACCAATTT
TTACGAACGCCTCGTTTTGGCGACTATCGGACCGATGGCAGTGCTTGGTG
GGCTAGCAATTATCTACCGGTTCGCCATGACAAGGAATGGTCACTCGATC
CGTGCGATGAAAGTGGTAAAGAACAAGCACCTCTCCATTGCGCTCTTTTT
ACTCTTCATAGTGTACTCTTCTGTGTCGTACACGATCTTCCAGACGTTCG
TCTGTGATCCTCTGGACTCCGGAGTCGCCTATCTGCGCGCCGATTACGGT
CTTGAGTGCTCGACCGATGCTCACACGGCCTTCATGACGTACGCCGGGTT
CATGGTGCTCGTGTATCCAGTCGGAATCCCGGCCGTATTTGCTTGGTGGC
TGTTTACCAATCGATATGAGATCGAGAACGCAGATGAACTAGCTATGGCC
GGGTTTCAGTCAGAGTTTGGAGCTGTAAATACTGCTAAAGATCTATGGAC
GCCGTACAAGCGGAACCGCTACTACTACGAAGTTGTCGAGTGCGGTCGAC
GGGTTGCACTTACTGGCCTTGTCGTCTTTATCTACCCCGGCAGCATGGCG
CAAGTGGCAATCGAAGCGCTGATTGCGGTCTTGTTCAACGCCGCGTCCGA
GATTCTAAGCCCATTCGCCGACCCCTTGGATGCATGGTTGTACCGTTCCG
GGACATGGGTAATATATCTCAGCATGTACCTCGCGCTACTTCTGAAGGCA
GACGTCACGGACGAGGAGAGCTATAATCAGAGTGTGTTCGCCGTACTGTT
GATCGCCGCTCACGGTGGTATGGTATTCTTATTGGCCGCTAATGCCCTTC
TATCGGCGTTGCAAGGGTTTAATGAAGCCCGAGTTGTCGAGATACCAATG
TCAACTCGGAACGCCTCTCAAGCGACGAGCTCTGTGCTGTGGAGCGAGAA
CAATATTTTTGCTCTCGAGAAGTGTAAAAGCGACGACAGGCAATATATTT
AG
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