prot_H-elongata_contig82907.15928.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82907.15928.1
Unique Nameprot_H-elongata_contig82907.15928.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length73
Homology
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: D7FIB3_ECTSI (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB3_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.820e-34
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            RLEVRNNSTGEEKVLHLTPEQENNDTHFHD+ETGVELEV DKQSLVEWIANNYKNFGAALEF+TNR
Sbjct:  334 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDTETGVELEVTDKQSLVEWIANNYKNFGAALEFITNR 399          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: A0A836CQL8_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL8_9STRA)

HSP 1 Score: 102 bits (255), Expect = 3.990e-24
Identity = 50/66 (75.76%), Postives = 55/66 (83.33%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            R  +RNN+T EEKVLHLTPEQE N++HF D ETG ELE  DK +LVEWIANNYKNFGA LEFVTNR
Sbjct:  336 RYTLRNNTTQEEKVLHLTPEQERNESHFRDGETGAELETIDKIALVEWIANNYKNFGATLEFVTNR 401          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: A0A7S3MEB0_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEB0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.840e-23
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            RL VRN ST EE VLHLTP+QE ND+HFHD  TGV+LE+ D+Q+LVEW+ANNYK+FGA LEF+T+R
Sbjct:  331 RLVVRNVSTSEESVLHLTPDQERNDSHFHDPVTGVQLEIIDRQTLVEWLANNYKSFGAKLEFITDR 396          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: A0A7S2XTC3_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTC3_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.900e-23
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            R  VRN +T EE +LHLT EQE NDT FHD ETGVELEV +K+S+VEW+ANNYKNFG  LEFVT+R
Sbjct:  189 RYVVRNTATSEESILHLTAEQEANDTFFHDKETGVELEVVEKESMVEWMANNYKNFGCNLEFVTDR 254          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: A0A7S2UVJ2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ2_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 5.020e-22
Identity = 48/66 (72.73%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            RL +RNNST EEKVL LTP+QE N +HFHD ETGVELE  +K  LVEW ANNYK FG  LEFVTNR
Sbjct:  326 RLVLRNNSTQEEKVLFLTPDQEQNASHFHDPETGVELETIEKMPLVEWFANNYKKFGTTLEFVTNR 391          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: A0A7S2LGT6_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LGT6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.590e-21
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            R  +RN+STGE+KV+HLT EQE N+T FHD  TGVELEV +K+ +VEWIAN+YK++G  LEFVT+R
Sbjct:   22 RYVLRNSSTGEDKVVHLTKEQEANETFFHDEGTGVELEVVEKEQMVEWIANHYKDYGCNLEFVTDR 87          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: A0A6T8LW95_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8LW95_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.860e-21
Identity = 43/66 (65.15%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            R E+RN ST E  ++HLT EQE ND  FHD+ETGVELEV +K+  VEW+ANNYK FG  LEFVT+R
Sbjct:   61 RFELRNTSTQETSIIHLTTEQEANDNFFHDTETGVELEVVEKEEFVEWMANNYKQFGCKLEFVTDR 126          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: A0A812U0R4_SYMMI (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U0R4_SYMMI)

HSP 1 Score: 93.6 bits (231), Expect = 9.550e-21
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            R+ V+N ST +E VLHLTPEQE ND+HFHD  TGVELEV +K SLVEW+AN Y+ +GA LEFVT+R
Sbjct:  331 RITVKNTSTQQETVLHLTPEQEQNDSHFHDPVTGVELEVVEKISLVEWLANEYRKYGANLEFVTDR 396          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: E7D171_LATHE (Putative eukaryotic release factor 1 isoform 2 (Fragment) n=1 Tax=Latrodectus hesperus TaxID=256737 RepID=E7D171_LATHE)

HSP 1 Score: 87.0 bits (214), Expect = 1.460e-20
Identity = 41/66 (62.12%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            R  ++N++T EEKVLHLTPEQE + THF D +TGVELE+ D   L+EW+ANNYK+FGA LE +T+R
Sbjct:    7 RYVLKNHTTDEEKVLHLTPEQEKDKTHFTDRDTGVELELIDSVPLLEWLANNYKSFGATLEIITDR 72          
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Match: B7FU01_PHATC (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU01_PHATC)

HSP 1 Score: 92.8 bits (229), Expect = 1.840e-20
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 0
Query:    1 RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIANNYKNFGAALEFVTNR 66
            R  +RN +TGEEKV+HLT EQE++D+HF DSETG ELE  +K++ VEW+ANNYK+FG  LEFVT+R
Sbjct:  331 RYVLRNQTTGEEKVIHLTQEQESDDSHFRDSETGTELETVEKETFVEWMANNYKSFGCNLEFVTDR 396          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82907.15928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIB3_ECTSI1.820e-3495.45Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A836CQL8_9STRA3.990e-2475.76Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S3MEB0_9STRA2.840e-2371.21Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S2XTC3_9STRA9.900e-2371.21Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S2UVJ2_9STRA5.020e-2272.73Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A7S2LGT6_9STRA1.590e-2165.15Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A6T8LW95_9STRA2.860e-2165.15Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A812U0R4_SYMMI9.550e-2168.18Eukaryotic peptide chain release factor subunit 1 ... [more]
E7D171_LATHE1.460e-2062.12Putative eukaryotic release factor 1 isoform 2 (Fr... [more]
B7FU01_PHATC1.840e-2065.15Eukaryotic peptide chain release factor subunit 1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005142eRF1 domain 3PFAMPF03465eRF1_3coord: 24..67
e-value: 3.2E-5
score: 24.4
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 1..70
e-value: 1.2E-17
score: 66.3
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 2..67
IPR004403Peptide chain release factor eRF1/aRF1PANTHERPTHR10113PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1coord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82907contigH-elongata_contig82907:226..929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82907.15928.1mRNA_H-elongata_contig82907.15928.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82907 226..929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82907.15928.1 ID=prot_H-elongata_contig82907.15928.1|Name=mRNA_H-elongata_contig82907.15928.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=73bp
RLEVRNNSTGEEKVLHLTPEQENNDTHFHDSETGVELEVKDKQSLVEWIA
NNYKNFGAALEFVTNRHVYRNL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005142eRF1_3
IPR029064L30e-like
IPR004403Peptide_chain-rel_eRF1/aRF1