prot_H-elongata_contig82875.15925.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig82875.15925.1
Unique Name	prot_H-elongata_contig82875.15925.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	126

Homology

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BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5KP87_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP87_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 5.920e-18
Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    4 AARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTEEA 97
            AA +CDVIGLQET+R G   IT  GY + +SG   G + ++G H +G+AIKE + D  G+    +EC S RL+K R+ I      TFVV YA TE A
Sbjct:    8 AATDCDVIGLQETRRAGQGAITHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETA 104

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BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 7.160e-17
Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    4 AARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTEEA 97
            AA +CDVIGLQET+R G   IT  GY + +SG   G + ++G H +G+AIKE + D  G+    +EC S RL+K R+ I      TFVV YA TE A
Sbjct:    8 AATDCDVIGLQETRRAGQGAITHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETA 104

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BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 7.200e-17
Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    4 AARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTEEA 97
            AA +CDVIGLQET+R G   IT  GY + +SG   G + ++G H +G+AIKE + D  G+    +EC S RL+K R+ I      TFVV YA TE A
Sbjct:  120 AATDCDVIGLQETRRAGQGAITHDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTETA 216

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BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.090e-16
Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 0

Query:    4 AARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTE 95
            +A  CDVIGLQET+R+G   I   GY + +SG   G + ++G H +G+AIKE I +  G++   +EC S RL+K R+ I      TFVV YA TE
Sbjct:   39 SATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 133

[Close]

BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5KEC1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC1_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 4.610e-16
Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0

Query:    3 FAARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTE 95
            F+A  CD+IGLQET+R+G   I   GY + +SG   G + ++G H +G+AIKE + +  G++   +EC S RL+K R+ I      TFVV YA TE
Sbjct:    7 FSATGCDMIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESGGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 102

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BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5KBF3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF3_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 4.830e-16
Identity = 42/95 (44.21%), Postives = 58/95 (61.05%), Query Frame = 0

Query:    4 AARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTE 95
            +A  CDVI LQET+R+G   I   GY + +SG   G + +KG H +G+AIKE + +  G++   +EC S RL+K R+ I      TFVV YA TE
Sbjct:    8 SATGCDVIRLQETRREGQGSIAHDGYVIIWSGARAGTKDKKGVHRVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 102

[Close]

BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 6.130e-16
Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 0

Query:    8 CDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYA-RTEEATEG 100
            CDVIGLQET+R+G   I   GY V +SG   G + ++G H +G+AIKE + D AG++   +EC S RL+K R+ I      TFVV YA RT   T G
Sbjct:  157 CDVIGLQETRREGQGSIAHDGYVVIWSGARAGTKDKRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPRTVRTTAG 253

[Close]

BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.250e-16
Identity = 42/95 (44.21%), Postives = 59/95 (62.11%), Query Frame = 0

Query:    4 AARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTE 95
            +A  CDVIGLQET+R+G   I   GY + +SG   G + ++G H +G+AIKE + +  G++   +EC S RL+K R+ I      TFVV YA TE
Sbjct:    8 SATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 102

[Close]

BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5K0W6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W6_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.180e-15
Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = 0

Query:    4 AARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTE 95
            +A  CDVIGLQET+R+G   I   GY + +SG   G + ++G H +G+AIKE + +  G++   +EC+S RL+K R+ I      TFVV YA TE
Sbjct:  850 SATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGIAIKEVMWESVGEEGRTVECSSPRLMKVRLQIGRTCRVTFVVGYALTE 944

[Close]

BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Match: A0A6H5JMM5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM5_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.270e-15
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0

Query:    8 CDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMGLAIKEEIVDKAGKDDIAIECTSARLLKARILIKSN---TFVVSYARTE 95
            CDVIGLQET+R+G   I   GY + +SG   G + ++G H +G AIKE + +  G++   +EC S RL+K R+ I      TFVV YA TE
Sbjct:   12 CDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKDKRGVHGVGRAIKEAMWESVGEEGRTVECISPRLMKVRLQIGRTCGVTFVVGYAPTE 102

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot

BLAST of mRNA_H-elongata_contig82875.15925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KP87_9PHAE	5.920e-18	47.42	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5KC90_9PHAE	7.160e-17	47.42	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JQH5_9PHAE	7.200e-17	47.42	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KZE6_9PHAE	2.090e-16	45.26	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5KEC1_9PHAE	4.610e-16	43.75	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KBF3_9PHAE	4.830e-16	44.21	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KDU4_9PHAE	6.130e-16	47.42	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KBZ6_9PHAE	8.250e-16	44.21	Endo/exonuclease/phosphatase domain-containing pro...	[more]
A0A6H5K0W6_9PHAE	1.180e-15	44.21	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JMM5_9PHAE	1.270e-15	45.05	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10		coord: 3..125 e-value: 2.6E-5 score: 26.0
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 7..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig82875	contig	H-elongata_contig82875:124..501 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig82875.15925.1	mRNA_H-elongata_contig82875.15925.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig82875 124..501 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig82875.15925.1 ID=prot_H-elongata_contig82875.15925.1|Name=mRNA_H-elongata_contig82875.15925.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp
RPFAARECDVIGLQETKRDGHYEITASGYRVYFSGDCTGVQGEKGQHWMG
LAIKEEIVDKAGKDDIAIECTSARLLKARILIKSNTFVVSYARTEEATEG
EKAKYIAAALNSTVSSVPAQEYVFI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036691	Endo/exonu/phosph_ase_sf