mRNA_H-elongata_contig82832.15922.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig82832.15922.1
Unique NamemRNA_H-elongata_contig82832.15922.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: D7G0Y3_ECTSI (Prohibitin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y3_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 2.500e-66
Identity = 103/120 (85.83%), Postives = 111/120 (92.50%), Query Frame = 1 
Query:   10 TVDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYDSLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKREVSTRTVIDTYSNR 369
            TVDGGHRAIVFNRLSGVKEGV+AEGMHF+IPWFEWPYIYDSLTGSKDLQMVSITLRVL+KPDP +LPFIYRRLG+DYDERVLPSIVNEVTKAVVAKYNASELLTKRE  ++ + D    R
Sbjct:   88 TVDGGHRAIVFNRLSGVKEGVMAEGMHFIIPWFEWPYIYDSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQRR 207
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: A0A6H5KHW4_9PHAE (Prohibitin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW4_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 3.450e-63
Identity = 102/129 (79.07%), Postives = 110/129 (85.27%), Query Frame = 1 
Query:   10 TVDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKREVSTRTVIDTYSNR 369
            TVDGGHRAIVFNRLSGVKEGV+ EGMHF+IPWFEWPYIYD         SLTGSKDLQMVSITLRVL+KPDP +LPFIYRRLG+DYDERVLPSIVNEVTKAVVAKYNASELLTKRE  ++ + D    R
Sbjct:   41 TVDGGHRAIVFNRLSGVKEGVMTEGMHFIIPWFEWPYIYDVRTKPRNVQSLTGSKDLQMVSITLRVLTKPDPFKLPFIYRRLGKDYDERVLPSIVNEVTKAVVAKYNASELLTKREAVSKNIRDALQKR 169
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: A0A6T5MRB1_HETAK (Prohibitin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MRB1_HETAK)

HSP 1 Score: 169 bits (427), Expect = 1.320e-49
Identity = 86/122 (70.49%), Postives = 98/122 (80.33%), Query Frame = 1 
Query:   10 TVDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKREVSTRTV 348
            TV+GGHRA+ FNRL+G+ E V  EGMHF++PW E P +YD         SLTGSKDLQMV+ITLRVLSKP+P  LP IYRRLG DYDERVLPSIVNEVTK+VVA+YNASELLTKRE  +R V
Sbjct:   42 TVEGGHRAVKFNRLTGIGEKVYEEGMHFMVPWLERPIVYDVRTRPRNLQSLTGSKDLQMVNITLRVLSKPNPATLPMIYRRLGTDYDERVLPSIVNEVTKSVVARYNASELLTKREAVSREV 163
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: W7TL69_9STRA (Prohibitin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL69_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.870e-48
Identity = 84/117 (71.79%), Postives = 98/117 (83.76%), Query Frame = 1 
Query:   10 TVDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKREV 333
            TV+GGHRA++FNRL GVKE V  EGMHF+IPWF+ P IYD         SLTGSKD+QMV+IT+RVLSKPD  +L +I+R LGRDYDERVLPSIVNEV+KAVVAKYNA+ELLTKRE+
Sbjct:   62 TVEGGHRALLFNRLIGVKEEVYMEGMHFMIPWFDMPIIYDIRPKPRMIQSLTGSKDMQMVNITIRVLSKPDSAQLRWIFRTLGRDYDERVLPSIVNEVSKAVVAKYNAAELLTKREM 178
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: A0A835Z7Y4_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y4_9STRA)

HSP 1 Score: 159 bits (402), Expect = 6.310e-46
Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 1 
Query:   10 TVDGGHRAIVFNRLSGVKEG---VLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKRE 330
            TV+GGHRAIVFNR+SG+K+G     +EGMHFVIP  EWP I+D         +LTGSKDLQMV++TLRVL KP+  +LPFIYRRL ++YD+RVLPSI+NEV KAVVAKYNASELLTKRE
Sbjct:   40 TVEGGHRAIVFNRISGIKDGPENTYSEGMHFVIPGMEWPIIFDVRTRPHQLTTLTGSKDLQMVNVTLRVLHKPNLTQLPFIYRRLHQNYDDRVLPSIINEVLKAVVAKYNASELLTKRE 158
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: A0A6P6XZB2_DERPT (Prohibitin n=4 Tax=Pyroglyphidae TaxID=6952 RepID=A0A6P6XZB2_DERPT)

HSP 1 Score: 159 bits (401), Expect = 9.890e-46
Identity = 77/116 (66.38%), Postives = 96/116 (82.76%), Query Frame = 1 
Query:   10 TVDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKRE 330
            TVDGGHRAI+F+R+SGV++GV AEG+HF IPWF+WP IYD         S TGSKDLQMV+I+LRVL++PD  +LP IYR LG D+DERVLPSI NEV K+VVAK+NAS+L+T+R+
Sbjct:   43 TVDGGHRAIIFSRISGVQQGVYAEGLHFRIPWFQWPVIYDIRSKPQQYSSPTGSKDLQMVNISLRVLARPDASKLPHIYRVLGTDFDERVLPSICNEVLKSVVAKFNASQLITQRQ 158
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: A0A7S2XX85_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX85_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.460e-45
Identity = 84/129 (65.12%), Postives = 95/129 (73.64%), Query Frame = 1 
Query:   10 TVDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKREVSTRTVIDTYSNR 369
            TV+GGHRAI F+R  G+      EG+ FVIPW E P IYD         SLTGSKDLQMV++TLRVLSKPDP  L FIYRRLG DYDERVLPSIVNEV+K+VVA+YNASELLTKRE  +R V    + R
Sbjct:   44 TVEGGHRAIKFSRFGGIGSMTYGEGLLFVIPWLERPIIYDVRTRPRNLQSLTGSKDLQMVNLTLRVLSKPDPNNLHFIYRRLGIDYDERVLPSIVNEVSKSVVARYNASELLTKREAVSREVASLLTKR 172
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: F4PM25_CAVFA (Prohibitin n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PM25_CAVFA)

HSP 1 Score: 156 bits (395), Expect = 6.590e-45
Identity = 80/128 (62.50%), Postives = 97/128 (75.78%), Query Frame = 1 
Query:   13 VDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKREVSTRTVIDTYSNR 369
            V+GGHRAIVFNR  G+K+ V  EG HF++PWFE P IYD         SLTGSKDLQMV+IT+RVLSKP    LP IYR LG+DYDERVLPSIVNEV K+VVA++NAS+L+T+RE  +R +    S+R
Sbjct:   43 VEGGHRAIVFNRFVGIKQKVYTEGTHFIVPWFERPEIYDVRAKPRNIASLTGSKDLQMVNITIRVLSKPSVAHLPTIYRSLGKDYDERVLPSIVNEVLKSVVAQFNASQLITQREQVSRLIYKRLSDR 170
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: Q75AR1_ASHGO (Prohibitin n=2 Tax=Eremothecium TaxID=33170 RepID=Q75AR1_ASHGO)

HSP 1 Score: 156 bits (395), Expect = 9.900e-45
Identity = 81/128 (63.28%), Postives = 96/128 (75.00%), Query Frame = 1 
Query:   13 VDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKREVSTRTVIDTYSNR 369
            VDGGHRAIV++RLSGV++ V  EG HFVIPW E P +YD         SLTG+ DLQMV+IT RVLS+PD Q LP IYR LG DYDERVLPSIVNEV KAVVA++NAS+L+T+RE  +R + D    R
Sbjct:   61 VDGGHRAIVYSRLSGVQQSVYGEGTHFVIPWLETPVLYDVRSKPRTVSSLTGTNDLQMVNITCRVLSRPDVQHLPLIYRTLGTDYDERVLPSIVNEVLKAVVAQFNASQLITQRESVSRLIRDNLVRR 188
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BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Match: B6A9I9_CRYMR (Prohibitin n=2 Tax=Cryptosporidium TaxID=5806 RepID=B6A9I9_CRYMR)

HSP 1 Score: 155 bits (393), Expect = 1.280e-44
Identity = 78/128 (60.94%), Postives = 99/128 (77.34%), Query Frame = 1 
Query:   13 VDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYD---------SLTGSKDLQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKYNASELLTKREVSTRTVIDTYSNR 369
            V+ GHRAI+F+R++GV++ V  EG HF+IPWFE P IYD         SLTGSKDLQMVSI+ RVLS+P   +LP IYR LG+DYDER+LPSI+NEV K+VVA+YNAS+LLT+RE+ TR + D  + R
Sbjct:   44 VEAGHRAIIFSRINGVQDKVYCEGTHFLIPWFERPIIYDIRAKPRVLVSLTGSKDLQMVSISCRVLSRPKSDKLPEIYRTLGQDYDERILPSIINEVLKSVVAQYNASQLLTQREIVTRRIRDLLTKR 171
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82832.15922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Y3_ECTSI2.500e-6685.83Prohibitin n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KHW4_9PHAE3.450e-6379.07Prohibitin n=1 Tax=Ectocarpus sp. CCAP 1310/34 Tax... [more]
A0A6T5MRB1_HETAK1.320e-4970.49Prohibitin n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
W7TL69_9STRA2.870e-4871.79Prohibitin n=3 Tax=Monodopsidaceae TaxID=425072 Re... [more]
A0A835Z7Y4_9STRA6.310e-4668.91Prohibitin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A6P6XZB2_DERPT9.890e-4666.38Prohibitin n=4 Tax=Pyroglyphidae TaxID=6952 RepID=... [more]
A0A7S2XX85_9STRA2.460e-4565.12Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
F4PM25_CAVFA6.590e-4562.50Prohibitin n=1 Tax=Cavenderia fasciculata (strain ... [more]
Q75AR1_ASHGO9.900e-4563.28Prohibitin n=2 Tax=Eremothecium TaxID=33170 RepID=... [more]
B6A9I9_CRYMR1.280e-4460.94Prohibitin n=2 Tax=Cryptosporidium TaxID=5806 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82832contigH-elongata_contig82832:1325..2612 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score215.3
Seed ortholog evalue1.6e-53
Seed eggNOG ortholog2880.D7G0Y3
Preferred namePHB2
KEGG koko:K17081
GOsGO:0000001,GO:0000003,GO:0000060,GO:0000819,GO:0001101,GO:0001302,GO:0001666,GO:0001763,GO:0001932,GO:0001934,GO:0002009,GO:0002082,GO:0003006,GO:0003008,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005743,GO:0005746,GO:0005747,GO:0005773,GO:0005774,GO:0005911,GO:0006140,GO:0006355,GO:0006457,GO:0006606,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006851,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007049,GO:0007059,GO:0007062,GO:0007088,GO:0007096,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007346,GO:0007548,GO:0007568,GO:0007569,GO:0007588,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008285,GO:0008406,GO:0009506,GO:0009507,GO:0009536,GO:0009611,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010941,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016363,GO:0017038,GO:0019219,GO:0019220,GO:0019222,GO:0019866,GO:0019867,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022612,GO:0023051,GO:0023056,GO:0023057,GO:0030001,GO:0030054,GO:0030154,GO:0030162,GO:0030312,GO:0030331,GO:0030421,GO:0030879,GO:0030964,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031401,GO:0031536,GO:0031647,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033218,GO:0033365,GO:0033554,GO:0033599,GO:0033600,GO:0033993,GO:0034220,GO:0034399,GO:0034504,GO:0034613,GO:0035239,GO:0035257,GO:0035258,GO:0035295,GO:0035632,GO:0036293,GO:0036294,GO:0040008,GO:0040014,GO:0040018,GO:0042127,GO:0042221,GO:0042325,GO:0042327,GO:0042695,GO:0042886,GO:0042981,GO:0043051,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043408,GO:0043410,GO:0043433,GO:0043467,GO:0044092,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044437,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044703,GO:0045136,GO:0045137,GO:0045184,GO:0045271,GO:0045787,GO:0045840,GO:0045861,GO:0045892,GO:0045927,GO:0045931,GO:0045934,GO:0045937,GO:0046543,GO:0046907,GO:0047485,GO:0048232,GO:0048308,GO:0048311,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048729,GO:0048731,GO:0048732,GO:0048754,GO:0048856,GO:0048869,GO:0050678,GO:0050680,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050821,GO:0050896,GO:0051090,GO:0051091,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051276,GO:0051427,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0055044,GO:0055085,GO:0060255,GO:0060259,GO:0060429,GO:0060443,GO:0060444,GO:0060548,GO:0060562,GO:0060603,GO:0060688,GO:0060744,GO:0060749,GO:0060762,GO:0061138,GO:0061180,GO:0061377,GO:0061458,GO:0062012,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070372,GO:0070374,GO:0070469,GO:0070482,GO:0070584,GO:0070588,GO:0070727,GO:0070838,GO:0070887,GO:0071229,GO:0071300,GO:0071310,GO:0071396,GO:0071453,GO:0071456,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072511,GO:0072594,GO:0080090,GO:0090068,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:0098805,GO:0098813,GO:1900542,GO:1901700,GO:1901701,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902806,GO:1902808,GO:1903506,GO:1903507,GO:1903578,GO:1903998,GO:1905330,GO:1990204,GO:2000026,GO:2000027,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.thelarche
EggNOG OGsCOG0330@1,KOG3090@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size381
Cds size381
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82832.15922.1prot_H-elongata_contig82832.15922.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig82832 1325..2612 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931234.5679784-CDS-H-elongata_contig82832:1324..14701622931234.5679784-CDS-H-elongata_contig82832:1324..1470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82832 1325..1470 -
1691679753.2974436-CDS-H-elongata_contig82832:1324..14701691679753.2974436-CDS-H-elongata_contig82832:1324..1470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82832 1325..1470 -
1622931234.5833757-CDS-H-elongata_contig82832:1865..19711622931234.5833757-CDS-H-elongata_contig82832:1865..1971Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82832 1866..1971 -
1691679753.3095515-CDS-H-elongata_contig82832:1865..19711691679753.3095515-CDS-H-elongata_contig82832:1865..1971Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82832 1866..1971 -
1622931234.594885-CDS-H-elongata_contig82832:2483..26121622931234.594885-CDS-H-elongata_contig82832:2483..2612Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82832 2484..2612 -
1691679753.3188732-CDS-H-elongata_contig82832:2483..26121691679753.3188732-CDS-H-elongata_contig82832:2483..2612Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig82832 2484..2612 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig82832.15922.1

>prot_H-elongata_contig82832.15922.1 ID=prot_H-elongata_contig82832.15922.1|Name=mRNA_H-elongata_contig82832.15922.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
MGDTVDGGHRAIVFNRLSGVKEGVLAEGMHFVIPWFEWPYIYDSLTGSKD
LQMVSITLRVLSKPDPQRLPFIYRRLGRDYDERVLPSIVNEVTKAVVAKY
NASELLTKREVSTRTVIDTYSNRQTQ*
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mRNA from alignment at H-elongata_contig82832:1325..2612-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig82832.15922.1 ID=mRNA_H-elongata_contig82832.15922.1|Name=mRNA_H-elongata_contig82832.15922.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1288bp|location=Sequence derived from alignment at H-elongata_contig82832:1325..2612- (Himanthalia elongata Himel1 dioecious)
ATGGGTGATACAGTGGATGGTGGCCACCGAGCGATTGTGTTCAATCGGCT
GAGCGGAGTCAAGGAGGGCGTGTTGGCCGAAGGAATGCACTTTGTTATCC
CGTGGTTCGAGTGGCCCTACATCTACGACGTGCGGACTAAGCCGCGGAAT
GTACAGGTGAATTGACAGGATTAAGAGGGAATGTGGAGGATTACGATGAA
CGGAATGACGGCTTCGAAGTCACGCCCTTCATGGTCGCGATTATAGTATA
TAGTATTACTGTAACATTTAGTTTATGGATGGATGGCGAAGGGGCTTAGT
GTATCTGTTAATATAGTATTTATAGCATACCAGTTGGGACTAGGCGAGAG
AGGAAGCGTTTGCGCCACTTCACTCCACACGATGAGCCATGAGCCACACG
ATGAGCCATGAGCCGCTTACTTTTGGACTAGTGCGTGTAATATGACCGTC
TCAACGTTGCCCGCATTCAGCATTCAGTATACTGGGGGGGTTTTGGTATC
CGTCCTCGGCGTGGCTCTTTACCTTACACCCTAGCCTATTGGCCTAGCCT
ATTTTATCCCGCACGCGGTATGTGCCTGTATCTGTGTACCCTTTTTGAGA
ATGCCGTGCTTGGTTTTGTTCCTCGTCCCCTGGTGCTACAGTCTCTGACT
GGGTCAAAGGACCTCCAGATGGTGAGTATCACGCTCCGTGTGCTGTCCAA
GCCTGACCCTCAGAGGCTGCCCTTCATCTACCGCCGCTTGGGCAGGGGTA
AGTAATAAGTAATAATCAAGTAATCAAGGAATGAAGCGCTAATAATATAC
TGCATACTGTATGTAGTTCCAAGTAATCAAGCAATGAAGCAATCAAGCGC
TAATAATATACTGCATACTGTATGCAGTTCCAAGTAATCAAGTAATCAAG
CGATAACGATATATTGTACCGGTATGCAGTTTCTTGTCGCGGCTTTTTTG
CCGTTTGAGTTCCAGATAGTTTGCTCCAACGATGAAGCGCTGGGACCGAC
AATCGATGCCCCCGCTGATGCAGACGGTTGGTCGCCTCCGATTATCTCGG
CTGGACTATCTTCGACTATCTTCTCCTGAGTTCAATAACGCGGTCATGAT
CCGTGCGGCGTGGCCCTATACTTCATTGGTGTTTGATGACAGATTACGAC
GAGCGCGTGCTGCCGTCGATCGTGAACGAGGTCACTAAGGCTGTTGTGGC
CAAGTACAACGCTTCGGAACTTCTCACCAAGCGAGAGGTCAGTACACGCA
CAGTAATAGACACATATAGTAATAGACAGACACAGTAA
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Coding sequence (CDS) from alignment at H-elongata_contig82832:1325..2612-

>mRNA_H-elongata_contig82832.15922.1 ID=mRNA_H-elongata_contig82832.15922.1|Name=mRNA_H-elongata_contig82832.15922.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig82832:1325..2612- (Himanthalia elongata Himel1 dioecious)
ATGGGTGATACAGTGGATGGTGGCCACCGAGCGATTGTGTTCAATCGGCT
GAGCGGAGTCAAGGAGGGCGTGTTGGCCGAAGGAATGCACTTTGTTATCC
CGTGGTTCGAGTGGCCCTACATCTACGACATGGGTGATACAGTGGATGGT
GGCCACCGAGCGATTGTGTTCAATCGGCTGAGCGGAGTCAAGGAGGGCGT
GTTGGCCGAAGGAATGCACTTTGTTATCCCGTGGTTCGAGTGGCCCTACA
TCTACGACTCTCTGACTGGGTCAAAGGACCTCCAGATGGTGAGTATCACG
CTCCGTGTGCTGTCCAAGCCTGACCCTCAGAGGCTGCCCTTCATCTACCG
CCGCTTGGGCAGGGTCTCTGACTGGGTCAAAGGACCTCCAGATGGTGAGT
ATCACGCTCCGTGTGCTGTCCAAGCCTGACCCTCAGAGGCTGCCCTTCAT
CTACCGCCGCTTGGGCAGGGATTACGACGAGCGCGTGCTGCCGTCGATCG
TGAACGAGGTCACTAAGGCTGTTGTGGCCAAGTACAACGCTTCGGAACTT
CTCACCAAGCGAGAGGTCAGTACACGCACAGTAATAGACACATATAGTAA
TAGACAGACACAGTAAATTACGACGAGCGCGTGCTGCCGTCGATCGTGAA
CGAGGTCACTAAGGCTGTTGTGGCCAAGTACAACGCTTCGGAACTTCTCA
CCAAGCGAGAGGTCAGTACACGCACAGTAATAGACACATATAGTAATAGA
CAGACACAGTAA
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