prot_H-elongata_contig8281.15920.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig8281.15920.1
Unique Name	prot_H-elongata_contig8281.15920.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	71

Homology

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BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: D7FKF4_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKF4_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.500e-27
Identity = 59/68 (86.76%), Postives = 66/68 (97.06%), Query Frame = 0

Query:    2 EEVRLNPQARMAQKSVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 69
            E+VRLNPQARMAQKSVKDR+K+QAQRQRH+AKRTIEMQQ KK+AEARKARYL+E GGMQYTA+AMANR
Sbjct:  132 EDVRLNPQARMAQKSVKDRMKDQAQRQRHLAKRTIEMQQTKKDAEARKARYLKETGGMQYTALAMANR 199

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BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A835ZIX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIX0_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.270e-13
Identity = 39/68 (57.35%), Postives = 55/68 (80.88%), Query Frame = 0

Query:    2 EEVRLNPQARMAQKSVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 69
            E++R NPQ   A +SV +RVKE A +Q+H A+R+IE+Q  K++AEARKAR++ E GG++YTA+AMANR
Sbjct:  150 EDLRRNPQRAEASRSVAERVKEAALKQKHFAQRSIELQAAKRDAEARKARFMAEAGGLKYTAMAMANR 217

[Close]

BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Match: A0A7R9ZLQ0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLQ0_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.580e-5
Identity = 25/52 (48.08%), Postives = 42/52 (80.77%), Query Frame = 0

Query:   18 KDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKARYLQEMGGMQYTAVAMANR 69
            +D +K +A++  H A+R +EM++ K+  E+RKA+Y+Q+ GG++YTA+AMANR
Sbjct:  214 RDGLKARAKKAAHFARRELEMRETKRTRESRKAKYIQDSGGLKYTAIAMANR 265

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot

BLAST of mRNA_H-elongata_contig8281.15920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FKF4_ECTSI	2.500e-27	86.76	PH domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]
A0A835ZIX0_9STRA	5.270e-13	57.35	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7R9ZLQ0_9STRA	1.580e-5	48.08	Hypothetical protein n=1 Tax=Craspedostauros austr...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 22..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig8281	contig	H-elongata_contig8281:3629..3841 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig8281.15920.1	mRNA_H-elongata_contig8281.15920.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig8281 3433..5155 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig8281.15920.1 ID=prot_H-elongata_contig8281.15920.1|Name=mRNA_H-elongata_contig8281.15920.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MEEVRLNPQARMAQKSVKDRVKEQAQRQRHVAKRTIEMQQKKKEAEARKA
RYLQEMGGMQYTAVAMANRR*