prot_H-elongata_contig82675.15912.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82675.15912.1
Unique Nameprot_H-elongata_contig82675.15912.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length90
Homology
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: D7FSE5_ECTSI (Casein kinase II subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSE5_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.160e-54
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0
Query:    1 ADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVSPYGGE 90
            ADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGI DEPKKEAVKLYCPRC DVYNTVSPYGGE
Sbjct:   39 ADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGE 128          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: A0A6H5KX78_9PHAE (Casein kinase II subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX78_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.080e-53
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0
Query:    1 ADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVSPYGGE 90
            ADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGI DEPKKEAVKLYCPRC DVYNTVSPYGGE
Sbjct:   73 ADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGIFDEPKKEAVKLYCPRCCDVYNTVSPYGGE 162          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: A0A6V1P2G8_HETAK (Casein kinase II subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P2G8_HETAK)

HSP 1 Score: 121 bits (303), Expect = 3.420e-31
Identity = 53/89 (59.55%), Postives = 68/89 (76.40%), Query Frame = 0
Query:    2 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVSPYGGE 90
            D+  DP++AQ+A++LYG+IHARFI T+RGLE MYKKYR  +FGRCPR +CK+Q VVP GI D P KE VK+YCP+C  VY   +  G +
Sbjct:   65 DDNLDPMMAQAAYLLYGLIHARFITTSRGLEVMYKKYRTGDFGRCPRMLCKDQFVVPAGIYDHPNKEKVKVYCPKCGQVYGVPTNPGEQ 153          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: U9SHE8_RHIID (Casein kinase II subunit beta n=11 Tax=Eukaryota TaxID=2759 RepID=U9SHE8_RHIID)

HSP 1 Score: 114 bits (284), Expect = 1.460e-29
Identity = 49/84 (58.33%), Postives = 65/84 (77.38%), Query Frame = 0
Query:    2 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVS 85
            D+     V +SA  LYG+IHARFI+T+RGL  M +KY+ A+FGRCPR +C NQP++PVG+SD+P  ++VKLYCPRC D+YN  S
Sbjct:   69 DDEMREAVEKSARHLYGLIHARFIITSRGLAKMLEKYKKADFGRCPRVLCHNQPLLPVGLSDQPYTKSVKLYCPRCEDIYNPKS 152          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: A0A2Z6RID5_9GLOM (Casein kinase II subunit beta n=3 Tax=Glomeromycetes TaxID=214506 RepID=A0A2Z6RID5_9GLOM)

HSP 1 Score: 114 bits (284), Expect = 4.150e-29
Identity = 49/84 (58.33%), Postives = 65/84 (77.38%), Query Frame = 0
Query:    2 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVS 85
            D+     V +SA  LYG+IHARFI+T+RGL  M +KY+ A+FGRCPR +C NQP++PVG+SD+P  ++VKLYCPRC D+YN  S
Sbjct:  115 DDEMREAVEKSARHLYGLIHARFIITSRGLAKMLEKYKKADFGRCPRVLCHNQPLLPVGLSDQPYTKSVKLYCPRCEDIYNPKS 198          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: A0A397G234_9GLOM (Casein kinase II subunit beta n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G234_9GLOM)

HSP 1 Score: 113 bits (282), Expect = 8.240e-29
Identity = 49/84 (58.33%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    2 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVS 85
            D+     V +SA  LYG+IHARFI+T+RGL  M  KY+ A+FGRCPR +C NQP++PVG+SD+P  ++VKLYCPRC D+YN  S
Sbjct:  115 DDEMREAVEKSARHLYGLIHARFIITSRGLAKMLDKYKKADFGRCPRVLCHNQPLLPVGLSDQPYTKSVKLYCPRCEDIYNPKS 198          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: A0A6U2PBT7_9STRA (Casein kinase II subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2PBT7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.960e-28
Identity = 45/80 (56.25%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    2 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVY 81
            +E Q  +V  +A MLYG+IHAR+IVT+RG+ AMY+KYR+A FGRCPR  C+ QPV+PVG+SD P+   V ++CPRC +++
Sbjct:    8 NEEQQEIVESAAEMLYGLIHARYIVTSRGMHAMYEKYRIASFGRCPRVFCQGQPVLPVGMSDLPRNYTVNVFCPRCHELF 87          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: A0A0K9NYU0_ZOSMR (Casein kinase II subunit beta n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NYU0_ZOSMR)

HSP 1 Score: 110 bits (274), Expect = 2.710e-28
Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0
Query:    2 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNT 83
            +E  D ++  SA MLYG+IHAR+I+T RGL+AM +K+  A+FG CPR +CKNQ  +PVGISD+P KE +K+YCP C+DVY+T
Sbjct:   92 EEVDDNILKHSAEMLYGLIHARYILTPRGLKAMSEKFENADFGFCPRVLCKNQYCLPVGISDKPHKEFIKIYCPNCQDVYDT 173          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: A0A507ECY4_9FUNG (Casein kinase II subunit beta n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507ECY4_9FUNG)

HSP 1 Score: 110 bits (276), Expect = 2.800e-28
Identity = 49/77 (63.64%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    9 VAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVS 85
            V +SA  LYGMIHARF++TARGL  M  K+R AEFGRCPR +C+NQPV+P G++D P  + VKLYCPRC DVY+ V+
Sbjct:   79 VEKSARQLYGMIHARFVITARGLAKMLDKFRHAEFGRCPRVLCENQPVLPCGLADTPGIKCVKLYCPRCEDVYSPVA 155          
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Match: A0A1Y2BJB6_9TREE (Casein kinase II subunit beta n=1 Tax=Naematelia encephala TaxID=71784 RepID=A0A1Y2BJB6_9TREE)

HSP 1 Score: 111 bits (277), Expect = 3.550e-28
Identity = 51/89 (57.30%), Postives = 66/89 (74.16%), Query Frame = 0
Query:    2 DEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTMCKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVSPYGGE 90
            D+    VV  SA  LYG+IHAR+IVT+RGL+ M +KYR A+FGRCPR  C +QP++PVG+SD P ++AVKLYCPRC D+Y+  S   G 
Sbjct:   71 DDDLREVVETSARFLYGLIHARYIVTSRGLQKMLEKYRKADFGRCPRVYCYSQPLLPVGLSDIPYQKAVKLYCPRCEDIYSPKSNRHGS 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82675.15912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSE5_ECTSI1.160e-5497.78Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
A0A6H5KX78_9PHAE1.080e-5397.78Casein kinase II subunit beta n=1 Tax=Ectocarpus s... [more]
A0A6V1P2G8_HETAK3.420e-3159.55Casein kinase II subunit beta n=1 Tax=Heterosigma ... [more]
U9SHE8_RHIID1.460e-2958.33Casein kinase II subunit beta n=11 Tax=Eukaryota T... [more]
A0A2Z6RID5_9GLOM4.150e-2958.33Casein kinase II subunit beta n=3 Tax=Glomeromycet... [more]
A0A397G234_9GLOM8.240e-2958.33Casein kinase II subunit beta n=1 Tax=Diversispora... [more]
A0A6U2PBT7_9STRA1.960e-2856.25Casein kinase II subunit beta n=1 Tax=Leptocylindr... [more]
A0A0K9NYU0_ZOSMR2.710e-2858.54Casein kinase II subunit beta n=1 Tax=Zostera mari... [more]
A0A507ECY4_9FUNG2.800e-2863.64Casein kinase II subunit beta n=1 Tax=Powellomyces... [more]
A0A1Y2BJB6_9TREE3.550e-2857.30Casein kinase II subunit beta n=1 Tax=Naematelia e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000704Casein kinase II, regulatory subunitPRINTSPR00472CASNKINASEIIcoord: 17..38
score: 60.8
coord: 42..63
score: 56.53
coord: 64..85
score: 48.58
IPR000704Casein kinase II, regulatory subunitSMARTSM01085CK_II_beta_2coord: 1..90
e-value: 1.2E-14
score: 54.6
IPR000704Casein kinase II, regulatory subunitPFAMPF01214CK_II_betacoord: 4..84
e-value: 3.2E-34
score: 118.3
IPR000704Casein kinase II, regulatory subunitPANTHERPTHR11740CASEIN KINASE II SUBUNIT BETAcoord: 3..87
NoneNo IPR availableGENE3D2.20.25.20coord: 43..88
e-value: 3.8E-19
score: 70.4
NoneNo IPR availablePANTHERPTHR11740:SF0CASEIN KINASE II SUBUNIT BETAcoord: 3..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..27
IPR016149Casein kinase II, regulatory subunit, N-terminalGENE3D1.10.1820.10coord: 1..42
e-value: 5.3E-12
score: 48.0
IPR035991Casein kinase II subunit beta-likeSUPERFAMILY57798Casein kinase II beta subunitcoord: 5..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82675contigH-elongata_contig82675:1140..2549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82675.15912.1mRNA_H-elongata_contig82675.15912.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82675 1140..2549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82675.15912.1 ID=prot_H-elongata_contig82675.15912.1|Name=mRNA_H-elongata_contig82675.15912.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
ADEPQDPVVAQSAFMLYGMIHARFIVTARGLEAMYKKYRLAEFGRCPRTM
CKNQPVVPVGISDEPKKEAVKLYCPRCRDVYNTVSPYGGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000704Casein_kinase_II_reg-sub
IPR016149Casein_kin_II_reg-sub_N
IPR035991Casein_kinase_II_beta-like