mRNA_H-elongata_contig82652.15910.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 469 bits (1208), Expect = 6.790e-159 Identity = 277/557 (49.73%), Postives = 333/557 (59.78%), Query Frame = 1
Query: 1 LNSKITVPTRRVILERMRAIKALLEAEACLMLDGEFVAITTNDWTSRKNNSYMSLTVAYIDSKWKLHTLSLDCSKHTGTTTGEDLEK------------------------------------------------------------------------------------------GI-----------------STWAMVNRLLYLMEAIKHHESIDKINPLLSNTDWEVLRLIDPILEQFMLAQKKLEGAEYVTDSLVIPQVAMMRDELKTAIDDLEDVSSPGPADAQREAMLIVRLNAQALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASEAVEMALRNKSGDTVAVPVTTPT---IEMSPVP-AAGQGGPKRPRLNPFEAAAAAHAVSSIIAGD--STDEIREKMFTIVDTEVSAFKTAPGIWVSEV----VGEKKVYNDPLGWWRTKER*FPTLAALARRVLAIPASQAQSERMFSTVGLIVTPTRNRLFPENAELLEYLRDVWDVVDGWKKSASKKR 1320
LN + VP+RR +L RMRA+K LE+E LMLD EFVAITT+ WTSR N SYMSLTVAYID +WKLH LSLDC+KHTGTTTGEDL GI STWAMV RLLYLM+AIK HES+D+++PLLS+TDWEVLRLI+PIL FM AQK LEGA+YVT S+ I ++A +R+ L+ AI DL+ V+ G + ++AM VR +A+AL ADFTNRW DG NI EY+EGKRRQPQGFK +QV AT LDPR+KHLYGI +E GVW AVAS AV++AL +GD P ++ P P GQG KRPR++ FEAAAA S DE RE++ IVD EVSAFK APGI V ++ G+KKV+N+PL WR K+ +P LAALARRVLAIP+SQAQSER+FST GL VTPTR+RL EN ELL YLR+VW VVD WKKSA++K+
Sbjct: 5 LNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLRNVWGVVDEWKKSATRKK 561
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 402 bits (1032), Expect = 1.370e-132 Identity = 237/510 (46.47%), Postives = 290/510 (56.86%), Query Frame = 1
Query: 1 LNSKITVPTRRVILERMRAIKALLEAEACLMLDGEFVAITTNDWTSRKNNSYMSLTVAYIDSKWKLHTLSLDCSKHTGTTTGEDLEKGI-----------------------------------------------------------------------------------------------------------STWAMVNRLLYLMEAIKHHESIDKINPLLSNTDWEVLRLIDPILEQFMLAQKKLEGAEYVTDSLVIPQVAMMRDELKTAIDDLEDVSSPGPADAQREAMLIVRLNAQALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASEAVEMALRNKSGDTVAVPVTTPTIE---MSPVPAAGQGGPKRPRLNPFEAAAAAHA--VSSIIAGDSTDEIREKMFTIVDTEVSAFKTAPGI--WVSEVVGEKKVYNDPLGWWRTKER*FPTLAALARRVLAIPASQAQSERM 1188
LN K P RR ++E+MR IK LE+E LMLD E+VAITT+ WTSR N SYMSLTVAYID W+LH LSL+C+KHTG+T GEDL + I S+WAM+ RLLYLM+AIK HES D I P+LS TDWEVLRLI+PIL FM AQK LEGA+YVT S+ +P++ +R+ L+ AI DL G + + REAM V +A+ALW DF NRW DG +I EY+EGKRRQPQGFKL+QVCAT +DPR+KHLYGI E VW AVA++AV++A S D A + P + PV GQG PKR RL+ FEAAAAAHA +S G + DE RE++ ++VD EV++F+T PGI W G KKVYNDPL WWRT++ FP LAALARRVLAIP+SQA SER+
Sbjct: 41 LNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDG-KKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 223 bits (569), Expect = 4.230e-61 Identity = 146/379 (38.52%), Postives = 192/379 (50.66%), Query Frame = 1
Query: 268 STWAMVNRLLYLMEAIKHHESIDKINPLLSNTDWEVLRLIDPILEQFMLAQKKLEGAEYVTDSLVIPQVAMMRDELKTAIDDLEDVSSPGPADAQREAMLIVRLNAQALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASEAVEMALRNKSGDTVAVP-----------------------------------------VTTPTIEMSPVPA--AGQGGPKRPRLNPFEAAAAAHAVSSIIAGDSTDEIREKMFTIVDTEVSAFKTAPGIWVSEVVGEKKVYNDPLGWWRTKER*FPTLAALARRVLAIPASQAQSERMFSTVGLIVTPTRNRLFPENAELLEYLRDV 1275
ST+ + RL+ L I HE ID PLL DWEVL+L++ +L+ FM AQK LE ++ VT LV P +A ++D L A++ L+ S P + EA V L AQAL D + RW D ++ Y EG RRQP+GFK QV AT L PRSK LYGI E VWDA A+EAV++A+ K+ + + SP+P A AH A S+ +R +M +I+ EV AFK PG+ VS ++V PL WWR K R +P LA+LARRVL IPA QAQSER+FS+ GL+VT TR R+ PEN L+ +LR+
Sbjct: 166 STYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAES-IVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLRNT 543
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 192 bits (487), Expect = 3.400e-52 Identity = 159/548 (29.01%), Postives = 224/548 (40.88%), Query Frame = 1
Query: 1 LNSKITVPTRRVILERMRAIKALLEAEACLMLDGEFVAITTNDWTSRKNNSYMSLTVAYIDSKWKLHTLSLDCSKHTGTTTGEDLEKGI-----------------------------------------------------------------------------------------------------------STWAMVNRLLYLMEAIKHHESIDKINPLLSNTDWEVLRLIDPILEQFMLAQKKLEGAEYVTDSLVIPQVAMMRDELKTAIDDLEDVSSPGPADAQREAMLIVRLNAQALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASEAVEMALRNKSG-DTVAVPVTTPTIEMSPVPAAGQGGPKRPRLNPFEAAAAAHAVSSIIAGDSTDEIREKMFTIVDTEVSAFKTAPGIWVSEVVGEKKVYNDPLGWWRTKER*FPTLAALARRVLAIPASQAQSERMFSTVGLIVTPTRNRLFPENAELLEYLRDVWDVVDGWKKSASKKR 1320
L S+ TVP +R+ LE++R +K L+ E L GE VA+T++ WTS N++YM T YI S + L L ++C KH G TTGEDL + + ST+A + RLL L I HE ID I PLL DWEVL++++P+ + F+L+QK E ++ VT SLVIP +A +RDEL A++ L+ + P + ++ +A R I +P+GFK +QV AT LDPRSK LYGI E VW+AVA+EAV++A+ K+ DT + ++ I + P A F AA+A + GD T RVL IPASQ QSER+FS+ GL+VT TR R+ PEN EL+ +LR+V VD W + +K++
Sbjct: 14 LKSRATVPHKRLFLEKLRGMKKGLDQEVLGRLTGEHVAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPAES-------IVAEAKKDVFFAPKHVRPTSVIV----------EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSLIPVEP---AAXXXXXXXXXXDFAAASA-------VPGDKQQSANASSST------------------------------------------------SRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFLRNVLREVDRWNGNGNKRK 486
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 159 bits (401), Expect = 1.430e-41 Identity = 107/264 (40.53%), Postives = 132/264 (50.00%), Query Frame = 1
Query: 601 DFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASEAVEMAL--RNKSGDTVAVPVTTPTIEMSPVP-------------------------AAGQGGPKRPRLNPFEAAAAAHAVSSIIAGDSTDEIREKMFTI-VDTEVSAFKTAPGIWVSEVVGE-KKVYNDPLGWWRTKER*FPTLAALARRVLAIPASQAQSERMFSTVGLIVTPTRNRLFPENAELLEYLRDVWDVVDGWKKS 1305
DF NRW DG NI YKEG+RRQP GFK QV AT LDPR+K LYG+ E+ VW V EAV++A+ RN A P A GG + P+L+ + D ++ T V E++AFK + GI + E E KVY DPL WWR + FP LA LARRVLAIPA+QA+SER+FS G IVT RN L P ELL LR W +V+ W++S
Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLD-----------------EGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVEEWEQS 296
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 157 bits (396), Expect = 5.600e-40 Identity = 97/207 (46.86%), Postives = 127/207 (61.35%), Query Frame = 1
Query: 331 IDKINPLLSNTDWEVLRLIDPILEQFMLAQKKLEGAEYVTDSLVIPQVAMMRDELKTAIDDLEDVSSPGPADAQREAMLIVRLNAQALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASEAVEMALRNKSG-DTVAVPVTTPTIEMSPVPAAGQGGPKRPRLNPFEAAAAAHAVSS 948
ID I PLL+ DWEVL+L++P+L FM AQK LE ++ VT SLV +A +RDEL AI+ L+ S P + I+R A AL D + RW DG ++ Y EG RRQP+GFK +QV AT LDPRSK LYGI E VW+AVA+EAV++A+ K+ DT + ++ I + P AA P+R R F A+AAH SS
Sbjct: 159 IDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRC-APALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSPIPVEPAAAAAYQ-PRRRRG--FATASAAHGASS 361
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 146 bits (369), Expect = 2.270e-34 Identity = 104/313 (33.23%), Postives = 150/313 (47.92%), Query Frame = 1
Query: 19 VPTRRVILERMRAIKALLEAEACLMLDGEFVAITTNDWTSRKNNSYMSLTVAYIDSKWKLHTLSLDCSKHTGTTTGEDLEKGISTWAMVNRLLYLMEAIKH--HESIDKINPLLSN-------------------------------------------TDWEVLRLIDPILEQFMLAQKKLEGAEYVTDSLVIPQVAMMRDELKTAIDDLEDVSSPGPADAQ-REAMLIVRLNAQALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASEAVEMALRNKSGD 819
VP ++ + MR +K + + +++GE V IT++ WTS N++YMSLT I S WKL TLS+DCSK GTTTG+ L GI + L + A+ S+ K+ LL+ T + + ++ ++ K + VT SLV+P + +R+ L+ AIDDL V P +DA A V +AL D+ +RW DG NI YKEG RRQP GFK V AT LDPR+K YG+ E+ VW V EAV++A+ ++ +
Sbjct: 11 VPEKKDCVTTMRTVKKCMMEKVSRLIEGEQVCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVTGSLVVPFIYDLRNSLEDAIDDL--VELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAE 321
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: UPI001BE5FA24 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Chelmon rostratus TaxID=109905 RepID=UPI001BE5FA24) HSP 1 Score: 90.1 bits (222), Expect = 6.040e-16 Identity = 106/422 (25.12%), Postives = 166/422 (39.34%), Query Frame = 1
Query: 97 DGEFVAITTNDWTSRKNNSYMSLTVAYIDSKWKLHTLSLDCS----KHTGTTTGEDLEKGISTWAMVNRLLYL--------------------MEAIKH--HESIDKINPLLSNT--DWEVLRLIDPILEQFMLAQKKLEGAEYVTDSLVIPQVAMMRDELKTAIDDLEDVSSPGPADAQREAMLIVRLNAQALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLY----GILPKEQPGVWDAVASEAVEMALRNKSGDTVAVPVTTPTIEMSPVPAAGQGGPKRPRLNPFEAAAAAHAVSSIIAGDSTDEIREKMFTIVDTEVSAFKTAPGIWVSEVVGEKKVYNDPLGWWRTKER*FPTLAALARRVLAIPASQAQSERMFSTVGLIVTPTRNRLFPENAELLEYL 1266
D F A TT+ W+SR YMSLT+ YID +++ T L S HTG + L + +++W + L ++ H H +ID+ L T D EVL I+ L+ + L +YV+ S V P + + + DD +++ I Y E K + P+ +L + A+ ++PR K Y I P + + + VA +EM + G T T E P GPKR + + S G + V +E+ A+ + SE NDPL WW+ + +P ++ LA++ L IPA+ + SER+FST G +VT R L PE+ + L +L
Sbjct: 53 DLPFYATTTDLWSSRTMEPYMSLTIHYIDEDFEIKTRCLQTSFFPEDHTGEAIAQGLVEALASWDLQQERLVCITTDNGTNVVKAAALNQWTRLQCFGHRLHLAIDRKARTLIPTWQDTEVLESINQALQPLLEFTDALSSEKYVSISFVKPVLHLFSTSILKTTDDATTLTNTIKT-----------------------------KILTYLEEKYQDPETQELLDM-ASAVNPRFKMRYVNENRIAPIQARLISEMVAPANMEMGPTDPCGGT------TGNAEDGP------SGPKRRKT-----------LGSFFKGSCGSTSPNQEQQTVASELQAYLQCASL-DSE--------NDPLDWWKEHGKLYPRVSKLAKKYLCIPATSSPSERVFSTGGNVVTCHRASLKPEHVDRLVFL 412
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.950e-13 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 586 QALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASE-AVEMALRNKSGD 819
+AL DF NRW DG NI YKEG RRQP GFK QV AT LDPR+K L+G+ E+ VW V E AV++A+ ++ +
Sbjct: 167 KALRDDFINRWGDGRNILNYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAE 245
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Match: A0A672RIU4_SINGR (BED-type domain-containing protein n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672RIU4_SINGR) HSP 1 Score: 79.7 bits (195), Expect = 2.460e-12 Identity = 98/400 (24.50%), Postives = 159/400 (39.75%), Query Frame = 1
Query: 106 FVAITTNDWTSRKNNSYMSLTVAYIDSKWKLHTLSLDC----SKHTGTTTGEDLE-------KGISTWAMVNRLLYLMEAIKHHESIDKINPLL--SNTDWEVLRLIDPILEQFMLAQKKLEGAEYVTDSLVIPQVAMMRDELKTAIDDLEDVSSPGPADAQREAMLIVRLNAQALWADFTNRWDDGINIFEYKEGKRRQPQGFKLRQVCATTLDPRSKHLYGILPKEQPGVWDAVASEAVEMALRNKSGDTVAVPVTTPTIEMSPVPAAGQGGPKRPRLNPFEAAAAAHAVSSIIAGDSTDEIREKMFTIVDTEVSAFKTAPGIWVSEVVGEKKVYNDPLGWWRTKER*FPTLAALARRVLAIPASQAQSERMFSTVGLIVTPTRNRLFPENAELLEYL 1266
F + TT+ WTSR +++MS+T+ YI W+L + L C + HT + D + + S++ MV R L + + + D+ L ++D VL ++ +LE L G ++ T S V+P + + + L + S A +E I EY + + Q +L AT LDPR K+ + L D V V+ + K + ++ + + QGG K +++ AH +S DE+ + V + E +DPL WW+T P L+ R+ L I AS SERMF T G IV+P R+RL E+ ++L +L
Sbjct: 159 FYSCTTDLWTSRAADTFMSVTLQYISKSWELQSWCLGCCGLNTDHTTDLSSPDHKLIHDEPTRWNSSYDMVERFLEQQQVVCAVLAEDRKKWYLMPKDSDITVLETVNAVLEPLSTFTDALSGEKHTTLSSVLPLLWKICECLS------HEQSDSALAQEMKE------------------------KITEYLQYRYDDLQ-LQLLLNTATYLDPRFKNSFVSLK-------DDVKQSLVDESGHQKKSKS----------DLKQLLSTIQGGKKE--KGETTSSSQAHLSAS-------DELNGEFL-----------------VHGQMPEVSAEDDPLSWWKTNMGTLPQLSEFTRKYLCIAASSCSSERMFRTAGYIVSPRRSRLTQEHVDMLVFL 484 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82652.15910.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig82652.15910.1 >prot_H-elongata_contig82652.15910.1 ID=prot_H-elongata_contig82652.15910.1|Name=mRNA_H-elongata_contig82652.15910.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=356bp MRAIKALLEAEACLMLDGEFVAITTNDWTSRKNNSYMSLTVAYIDSKWKLback to top mRNA from alignment at H-elongata_contig82652:431..2068+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig82652.15910.1 ID=mRNA_H-elongata_contig82652.15910.1|Name=mRNA_H-elongata_contig82652.15910.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1638bp|location=Sequence derived from alignment at H-elongata_contig82652:431..2068+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig82652:431..2068+ >mRNA_H-elongata_contig82652.15910.1 ID=mRNA_H-elongata_contig82652.15910.1|Name=mRNA_H-elongata_contig82652.15910.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2136bp|location=Sequence derived from alignment at H-elongata_contig82652:431..2068+ (Himanthalia elongata Himel1 dioecious)back to top |