prot_H-elongata_contig8264.15909.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8264.15909.1
Unique Nameprot_H-elongata_contig8264.15909.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length207
Homology
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: D7FGZ9_ECTSI (DNA repair protein RAD52 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGZ9_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.220e-82
Identity = 133/189 (70.37%), Postives = 155/189 (82.01%), Query Frame = 0
Query:    5 YTSERPSSSGHSAQWVFGSSKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGK-WTAAATAIVRVALKNGVGHEDVGNAHLKDKDKGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLKCVERNHKQNQRDLKARQDRESAVR 192
            Y +ER  +SG  AQW+FG+ KF++EDHARIQ+ALNTALSW+QINSR G GGKKV YLAGHTV+ENANK+FGF GWDSSILHLSLDY  K+ DG+ W A ATAIVR+ + NG GHEDVGN+H+KDKDKGEV+ + KKAAVTDA KRALRLFG  LG  M +KEGLK  E  HKQNQR+LKA Q RE+ +R
Sbjct:    6 YNAERQGASGQGAQWIFGTDKFSDEDHARIQQALNTALSWDQINSRPGGGGKKVPYLAGHTVIENANKVFGFAGWDSSILHLSLDY--KSEDGRFWMAGATAIVRITVANGCGHEDVGNSHMKDKDKGEVLSRVKKAAVTDAKKRALRLFGTQLGSQMMDKEGLKETEITHKQNQRELKANQQREARMR 192          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: A0A6H5K4D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D8_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 5.530e-42
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 0
Query:    5 YTSERPSSSGHSAQWVFGSSKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYV 91
            Y +ER  +SG  AQW+FG+ KF++EDHARIQEALNTALSW+QINSR G GGKKV YLAGHTV+ENANK+FGF GWDSSILHLSLDYV
Sbjct:    6 YNAERQGTSGQGAQWIFGTDKFSDEDHARIQEALNTALSWDQINSRPGGGGKKVPYLAGHTVIENANKVFGFAGWDSSILHLSLDYV 92          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: UPI000644DBF2 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644DBF2)

HSP 1 Score: 132 bits (332), Expect = 2.890e-35
Identity = 66/149 (44.30%), Postives = 98/149 (65.77%), Query Frame = 0
Query:   20 VFGSSKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGKWTAAATAIVRVALKNGVGHEDVGNAHLKDKDKGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLK 168
            +FG+  +T+E+  R+   L+T L  +  + R G GG ++ YL     +E AN++FGF+GW S I+ L+LD+ E    GKW A A+AI+R+ LK+G  H+DVG    +D +KG  IE AKK AV+DA KR+LR+FG+ LG  + +K+ LK
Sbjct:    8 LFGNESYTQEEIERLAIELSTPLPRDDQSERPGPGGTRLTYLESWKAIEIANRVFGFNGWSSRIVELTLDFCEVAPSGKWRAGASAIIRIMLKDGTFHDDVGFGMREDSNKGTSIEHAKKEAVSDARKRSLRVFGNALGNKLYDKDPLK 156          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: A0A6H5JZ89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ89_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.580e-32
Identity = 67/103 (65.05%), Postives = 82/103 (79.61%), Query Frame = 0
Query:   91 VEKTSDGK-WTAAATAIVRVALKNGVGHEDVGNAHLKDKDKGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLKCVERNHKQNQRDLKARQDRESAVR 192
            +EK+ DG+ W A ATAIVR+ + NG GHEDVGN+H+KD+DKGEV+ + KKAAVTDA KRALRLFG  LG  M++KEGLK  E  HKQNQR+LKA Q RE+ +R
Sbjct:    7 LEKSEDGRFWMAGATAIVRITVANGCGHEDVGNSHMKDRDKGEVLSRVKKAAVTDAKKRALRLFGTQLGSQMTDKEGLKETEITHKQNQRELKANQQREARMR 109          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: A0A5J5EZ93_9PEZI (Uncharacterized protein n=1 Tax=Sphaerosporella brunnea TaxID=1250544 RepID=A0A5J5EZ93_9PEZI)

HSP 1 Score: 131 bits (330), Expect = 1.660e-32
Identity = 67/149 (44.97%), Postives = 94/149 (63.09%), Query Frame = 0
Query:   24 SKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGKWTAAATAIVRVALKNGVGHEDVGNAHLKDKDKGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLKCVER 172
            S +T  D A +Q  L+  L  E I+SR G GGKKVHY+     +  AN++FGF+GW SSI ++ +D++++  DGKW+   +  VRV LK+G  HEDVG   +++  K +V EKAKK   TD  KRALR FG+ LG  + +KE L  + R
Sbjct:   15 SPYTAIDIATLQAKLDQQLGPEFISSRPGAGGKKVHYIQADKCINLANQVFGFNGWSSSITNMEVDFLDQGKDGKWSVGISVTVRVTLKDGTYHEDVGYGQMENGKKAQVFEKAKKEGTTDGLKRALRSFGNVLGNCLYDKEYLAKISR 163          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: A0A517LLL4_9PEZI (Uncharacterized protein n=1 Tax=Venturia effusa TaxID=50376 RepID=A0A517LLL4_9PEZI)

HSP 1 Score: 131 bits (330), Expect = 4.040e-32
Identity = 68/148 (45.95%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   24 SKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGKWTAAATAIVRVALKNGVGHEDVGNAHLKDKD-KGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLKCV 170
            S++T ++ A++Q  L+  L  E I+SRQG GG KVHYLA   V+  AN++FGF+GW S I  +++DYV+   DG+ T   + IVR+ L++G  HED+G   +K+ + KG   EKAKK A TDA KRALR FG+ LG  + +K  L+ +
Sbjct:   26 SEYTAQEIAQLQSRLDKQLGPEYISSRQGPGGGKVHYLAAEKVINLANEVFGFNGWSSEIKDVTIDYVDIEKDGRITMGCSIIVRITLRDGTHHEDIGYGEIKNANGKGAAFEKAKKEAATDAVKRALRTFGNVLGNCLYDKSYLQKI 173          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: A0A8H3YIV5_VENIN (Uncharacterized protein n=1 Tax=Venturia inaequalis TaxID=5025 RepID=A0A8H3YIV5_VENIN)

HSP 1 Score: 130 bits (327), Expect = 5.480e-32
Identity = 67/148 (45.27%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   24 SKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGKWTAAATAIVRVALKNGVGHEDVGNAHLKDKD-KGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLKCV 170
            S+++ ++ A++Q  L+  L  E I+SRQG GG KVHYLA   V+  AN++FGF+GW S I  +++DYV+   DG+ T   + IVR+ L++G  HED+G   +K+ + KG   EKAKK A TDA KRALR FG+ LG  + +K  L+ +
Sbjct:  204 SEYSAQEIAQLQSRLDKQLGPEYISSRQGPGGGKVHYLAAEKVINLANEVFGFNGWSSEIKDVTIDYVDVEKDGRITMGCSIIVRITLRDGTHHEDIGYGEIKNANGKGAAFEKAKKEAATDAVKRALRTFGNVLGNCLYDKSYLQKI 351          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: A0A8H3V3B0_VENIN (Uncharacterized protein n=2 Tax=Venturia inaequalis TaxID=5025 RepID=A0A8H3V3B0_VENIN)

HSP 1 Score: 130 bits (327), Expect = 1.010e-31
Identity = 67/148 (45.27%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   24 SKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGKWTAAATAIVRVALKNGVGHEDVGNAHLKDKD-KGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLKCV 170
            S+++ ++ A++Q  L+  L  E I+SRQG GG KVHYLA   V+  AN++FGF+GW S I  +++DYV+   DG+ T   + IVR+ L++G  HED+G   +K+ + KG   EKAKK A TDA KRALR FG+ LG  + +K  L+ +
Sbjct:   26 SEYSAQEIAQLQSRLDKQLGPEYISSRQGPGGGKVHYLAAEKVINLANEVFGFNGWSSEIKDVTIDYVDVEKDGRITMGCSIIVRITLRDGTHHEDIGYGEIKNANGKGAAFEKAKKEAATDAVKRALRTFGNVLGNCLYDKSYLQKI 173          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: A0A4Z1NN93_9PEZI (Recombination protein Rad52 n=1 Tax=Venturia nashicola TaxID=86259 RepID=A0A4Z1NN93_9PEZI)

HSP 1 Score: 130 bits (327), Expect = 2.060e-31
Identity = 67/148 (45.27%), Postives = 98/148 (66.22%), Query Frame = 0
Query:   24 SKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGKWTAAATAIVRVALKNGVGHEDVGNAHLKDKD-KGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLKCV 170
            S+++ ++ A++Q  L+  L  E I+SRQG GG KVHYLA   V+  AN++FGF+GW S I  +++DYV+   DG+ T   + IVR+ L++G  HED+G   +K+ + KG   EKAKK A TDA KRALR FG+ LG  + +K  L+ +
Sbjct:  272 SEYSAQEIAQLQSRLDKQLGPEYISSRQGPGGGKVHYLAAEKVINLANEVFGFNGWSSEIKDVTIDYVDVEKDGRITMGCSIIVRITLRDGTHHEDIGYGEIKNANGKGAAFEKAKKEAATDAVKRALRTFGNVLGNCLYDKSYLQKI 419          
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Match: A0A024THR9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024THR9_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.300e-31
Identity = 67/158 (42.41%), Postives = 98/158 (62.03%), Query Frame = 0
Query:   17 AQWVFGSSKFTEEDHARIQEALNTALSWEQINSRQGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGKWTAAATAIVRVALKNGVGHEDVGNAHLKD-KDKGEVIEKAKKAAVTDATKRALRLFGDHLGGNMSNKEGLKCVERN 173
            A  +FGS  F  +D  R    L   L+   ++ R G GG+++ YL     +E AN+ FGF+GW   I+  +++  EKT DGKWT   +++VR+ LK+G  HEDVG    +  KD G  +E+AKKA+++DA KRALRLFG++LG +  +KE +K V  N
Sbjct:    7 ANSIFGSVPFNPDDQQRTDAYLRQKLNANFLSRRPGPGGRRLTYLESCKAIEIANEAFGFNGWSCRIVDCNVECKEKTDDGKWTVIYSSVVRIELKDGASHEDVGFGQSEGMKDLGAALEQAKKASISDARKRALRLFGEYLGNSCYDKEHIKDVAAN 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8264.15909.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGZ9_ECTSI1.220e-8270.37DNA repair protein RAD52 homolog n=1 Tax=Ectocarpu... [more]
A0A6H5K4D8_9PHAE5.530e-4278.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000644DBF22.890e-3544.30hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A6H5JZ89_9PHAE1.580e-3265.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5J5EZ93_9PEZI1.660e-3244.97Uncharacterized protein n=1 Tax=Sphaerosporella br... [more]
A0A517LLL4_9PEZI4.040e-3245.95Uncharacterized protein n=1 Tax=Venturia effusa Ta... [more]
A0A8H3YIV5_VENIN5.480e-3245.27Uncharacterized protein n=1 Tax=Venturia inaequali... [more]
A0A8H3V3B0_VENIN1.010e-3145.27Uncharacterized protein n=2 Tax=Venturia inaequali... [more]
A0A4Z1NN93_9PEZI2.060e-3145.27Recombination protein Rad52 n=1 Tax=Venturia nashi... [more]
A0A024THR9_9STRA2.300e-3142.41Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042525DNA repair protein Rad52/59/22 superfamilyGENE3D3.30.390.80coord: 27..173
e-value: 4.3E-46
score: 158.2
IPR041247Rad52 familyPFAMPF04098Rad52_Rad22coord: 32..178
e-value: 3.8E-40
score: 137.3
IPR007232DNA repair protein Rad52/59/22PANTHERPTHR12132DNA REPAIR AND RECOMBINATION PROTEIN RAD52, RAD59coord: 17..201
NoneNo IPR availablePANTHERPTHR12132:SF1DNA REPAIR PROTEIN RAD52 HOMOLOGcoord: 17..201
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 23..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8264contigH-elongata_contig8264:5697..8972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8264.15909.1mRNA_H-elongata_contig8264.15909.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8264 2600..9120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8264.15909.1 ID=prot_H-elongata_contig8264.15909.1|Name=mRNA_H-elongata_contig8264.15909.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=207bp
MEAPYTSERPSSSGHSAQWVFGSSKFTEEDHARIQEALNTALSWEQINSR
QGCGGKKVHYLAGHTVVENANKIFGFDGWDSSILHLSLDYVEKTSDGKWT
AAATAIVRVALKNGVGHEDVGNAHLKDKDKGEVIEKAKKAAVTDATKRAL
RLFGDHLGGNMSNKEGLKCVERNHKQNQRDLKARQDRESAVRSTHAPPLP
RQQQPH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042525Rad52_Rad59_Rad22_sf
IPR041247Rad52_fam
IPR007232Rad52_Rad59_Rad22