mRNA_H-elongata_contig8249.15903.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI) HSP 1 Score: 304 bits (779), Expect = 6.790e-93 Identity = 144/158 (91.14%), Postives = 153/158 (96.84%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
GVLVESLR+GYWIILDELNLAPS+VLEALNRLLDHNRELYL+ETQETI+PHPNFRLFATQNPPGAYGGRKPLSRAFRNRFME+HV+DIPG EW+IILAERCGLPPSHCKLLVKVL ELQ QRQSSRLFLGK+ AISPRDLLRWAGRKPQ KQ+LAEEG
Sbjct: 412 GVLVESLRKGYWIILDELNLAPSEVLEALNRLLDHNRELYLSETQETIKPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEVHVDDIPGAEWEIILAERCGLPPSHCKLLVKVLHELQAQRQSSRLFLGKHGAISPRDLLRWAGRKPQGKQQLAEEG 569
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: A0A448Z6E1_9STRA (Midasin n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6E1_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.680e-71 Identity = 114/158 (72.15%), Postives = 137/158 (86.71%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
G+LV++LR+G+W+ILDELNLAPS+VLEALNRLLD NRELYLAET ET++PHPNFRLFATQNP GAYGGRKPLSRAFRNRF+E+HV DIP E IL +RCG PPSH KLLV+++ +L+V+R S LFLGK+S I+PRDLLRWA R+ SK++LAE G
Sbjct: 410 GILVQALRKGHWVILDELNLAPSEVLEALNRLLDDNRELYLAETNETVKPHPNFRLFATQNPSGAYGGRKPLSRAFRNRFVELHVGDIPSDEMSQILEKRCGCPPSHAKLLVEIMVDLRVKRSKSNLFLGKDSFITPRDLLRWAERQSGSKKDLAEHG 567
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: B8C0J5_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0J5_THAPS) HSP 1 Score: 230 bits (586), Expect = 7.580e-70 Identity = 108/158 (68.35%), Postives = 130/158 (82.28%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
G+LV++LR+G+W+ILDELNLAPS+VLEALNRLLD NRELYL E ET++PH NFRLFATQNP GAYGGRKPLSRAFRNRF+EIH+ DIP E +IL RCG PPSH KLLVKV++ L+ +R + +F GK+ ++PRDLLRWAGR SK +LA EG
Sbjct: 112 GILVQALRKGHWVILDELNLAPSEVLEALNRLLDDNRELYLPEINETVKPHKNFRLFATQNPAGAYGGRKPLSRAFRNRFVEIHMADIPEDEMILILERRCGCPPSHAKLLVKVMKSLRQRRSRTGIFRGKDGLVTPRDLLRWAGRGASSKVDLAREG 269
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: A0A7S4N8L4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8L4_9STRA) HSP 1 Score: 232 bits (592), Expect = 3.190e-68 Identity = 112/158 (70.89%), Postives = 130/158 (82.28%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
G+LV++LRRG+W+ILDELNLAPS+VLEALNRLLD NRELYL ET ET+RPHP+FRLFATQNP GAYGGRKPLSRAFRNRF+E+HV DIP E IL RCG PP+H KLLVKV+ L+ +R S +F GK+ I+PRDLLRWAGR +K ELA EG
Sbjct: 348 GILVQALRRGHWVILDELNLAPSEVLEALNRLLDDNRELYLPETDETVRPHPDFRLFATQNPCGAYGGRKPLSRAFRNRFVELHVGDIPPGEMSTILELRCGCPPTHAKLLVKVMVSLRNRRSRSGVFRGKDGLITPRDLLRWAGRGASTKSELAAEG 505
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: A0A0D2WKA3_CAPO3 (Midasin n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WKA3_CAPO3) HSP 1 Score: 233 bits (593), Expect = 7.260e-68 Identity = 108/158 (68.35%), Postives = 129/158 (81.65%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
GVLVE++R+GYWI+LDELNLAPSDVLEALNRLLD NRELYL ETQET+RPHP+F LFATQNPPG YGGRK LSRAFRNRF+E+H +DIP E + IL+ RC +PPS+C LV +L++LQ QRQ + +F GK I+ RDL RWA R P Q+LAE+G
Sbjct: 1309 GVLVEAVRKGYWIVLDELNLAPSDVLEALNRLLDDNRELYLTETQETVRPHPHFMLFATQNPPGLYGGRKALSRAFRNRFVELHFDDIPDTELETILSSRCAIPPSYCTKLVAILRDLQKQRQGTNVFAGKQGFITLRDLFRWANRHPNGYQQLAEDG 1466
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: K0TEP4_THAOC (Midasin n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEP4_THAOC) HSP 1 Score: 229 bits (584), Expect = 1.180e-66 Identity = 110/158 (69.62%), Postives = 129/158 (81.65%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
G+LV++LR+GYW+ILDELNLAPS+VLEALNRLLD NRELYLAE E ++PH NFRLFATQNP GAYGGRKPLSRAFRNRF+EIH+ DIP E IL +RC PPSH KLLVKV++ L+ +R + +F GK+ I+PRDLLRWAGR SK ELA EG
Sbjct: 1376 GILVQALRKGYWVILDELNLAPSEVLEALNRLLDDNRELYLAEINEVVKPHENFRLFATQNPAGAYGGRKPLSRAFRNRFVEIHLSDIPEDEMVTILEKRCACPPSHAKLLVKVMKTLRQRRSRTGVFRGKDGLITPRDLLRWAGRGATSKAELALEG 1533
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: A0A662XM65_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XM65_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.180e-66 Identity = 107/158 (67.72%), Postives = 131/158 (82.91%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
GVLVE++R G+WIILDELNLAPS+VLEALNRLLD NREL+L ETQET++PHP F LFATQNPPG YGGRK LSRAFRNRF+EI V+++P E Q IL ER LPPS+C +L+ ++++LQ+ RQ S +F GK+ I+ RDLLRWA R+P +KQ LAEEG
Sbjct: 165 GVLVEAVRNGWWIILDELNLAPSEVLEALNRLLDDNRELFLPETQETVKPHPKFMLFATQNPPGLYGGRKVLSRAFRNRFLEIQVDEVPSAELQTILQERSSLPPSYCSILIDIMRQLQLVRQQSSVFAGKSGFITTRDLLRWAERRPATKQALAEEG 322
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: A0A7S2RVH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RVH4_9STRA) HSP 1 Score: 228 bits (580), Expect = 3.990e-66 Identity = 106/158 (67.09%), Postives = 126/158 (79.75%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
G+LVE++R GYWI+LDELNLAPS+VLEALNRLLD NREL++ ETQ+ ++PH NF LFATQNPPG YGGRK LSRAFRNRF+E+H+ DIP E + IL +RC L P CK LV V+ ELQ+ RQ SRLF GK I+PRDLLRWA R P + +ELA EG
Sbjct: 1121 GILVEAVRNGYWIVLDELNLAPSEVLEALNRLLDDNRELFIPETQQVVKPHANFMLFATQNPPGLYGGRKMLSRAFRNRFLELHIGDIPSAELETILNKRCQLAPPFCKTLVNVMNELQIHRQQSRLFAGKEGFITPRDLLRWANRSPDTYEELAVEG 1278
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: A0A7S2RV95_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RV95_9STRA) HSP 1 Score: 228 bits (580), Expect = 4.060e-66 Identity = 106/158 (67.09%), Postives = 126/158 (79.75%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
G+LVE++R GYWI+LDELNLAPS+VLEALNRLLD NREL++ ETQ+ ++PH NF LFATQNPPG YGGRK LSRAFRNRF+E+H+ DIP E + IL +RC L P CK LV V+ ELQ+ RQ SRLF GK I+PRDLLRWA R P + +ELA EG
Sbjct: 1121 GILVEAVRNGYWIVLDELNLAPSEVLEALNRLLDDNRELFIPETQQVVKPHANFMLFATQNPPGLYGGRKMLSRAFRNRFLELHIGDIPSAELETILNKRCQLAPPFCKTLVNVMNELQIHRQQSRLFAGKEGFITPRDLLRWANRSPDTYEELAVEG 1278
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Match: A0A7S3VEM6_9STRA (Midasin n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEM6_9STRA) HSP 1 Score: 228 bits (580), Expect = 4.070e-66 Identity = 110/158 (69.62%), Postives = 129/158 (81.65%), Query Frame = 1
Query: 1 GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPHPNFRLFATQNPPGAYGGRKPLSRAFRNRFMEIHVEDIPGPEWQIILAERCGLPPSHCKLLVKVLQELQVQRQSSRLFLGKNSAISPRDLLRWAGRKPQSKQELAEEG 474
G+LV++LR+G+W+ILDELNLAPS+VLEALNRLLD NRELYLAE E ++PHPNFRLFATQNP GAYGGRKPLSRAFRNRF+E+HV DIP E IL RC PPSH KLLVKV+ L+ +R S +F GK+ I+PRDLLRWA RK SK+ELA +G
Sbjct: 1281 GILVQALRKGHWVILDELNLAPSEVLEALNRLLDDNRELYLAEINEVVKPHPNFRLFATQNPSGAYGGRKPLSRAFRNRFVEMHVGDIPEQEMVTILELRCKCPPSHAKLLVKVMSSLRKRRSKSGVFRGKDGLITPRDLLRWAERKVVSKEELALQG 1438 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8249.15903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8249.15903.1 >prot_H-elongata_contig8249.15903.1 ID=prot_H-elongata_contig8249.15903.1|Name=mRNA_H-elongata_contig8249.15903.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=159bp GVLVESLRRGYWIILDELNLAPSDVLEALNRLLDHNRELYLAETQETIRPback to top mRNA from alignment at H-elongata_contig8249:6316..7382- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8249.15903.1 ID=mRNA_H-elongata_contig8249.15903.1|Name=mRNA_H-elongata_contig8249.15903.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1067bp|location=Sequence derived from alignment at H-elongata_contig8249:6316..7382- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8249:6316..7382- >mRNA_H-elongata_contig8249.15903.1 ID=mRNA_H-elongata_contig8249.15903.1|Name=mRNA_H-elongata_contig8249.15903.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=954bp|location=Sequence derived from alignment at H-elongata_contig8249:6316..7382- (Himanthalia elongata Himel1 dioecious)back to top |