mRNA_H-elongata_contig82480.15901.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: D7FX43_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX43_ECTSI) HSP 1 Score: 233 bits (593), Expect = 1.140e-70 Identity = 125/196 (63.78%), Postives = 139/196 (70.92%), Query Frame = 1
Query: 1 TEIEGMVNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR---------SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQ-------------------------DASRLRNLAEDVEMGLSTVGK 486
++I+ +V KI+ EV A ESRGG +GAENS+YT++AAVETAPQF CP C N+ QSNF DAKQGDTICLG DGQGCGTVVQDHKARR SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKAR ++ R +R Q DA+RLRNLAEDVEMGLSTVGK
Sbjct: 49 SDIDALVGKIVEEVSALESRGGQEGAENSDYTFVAAVETAPQFSCPVCKNKKQSNFMQDAKQGDTICLGTDGQGCGTVVQDHKARRRGGGGVHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARLSRSRYFLMRCAFFRQAGWLPLCRPAVLGGGGVAPFSWRGHDANRLRNLAEDVEMGLSTVGK 244
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: A0A7S4DHI7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHI7_HETAK) HSP 1 Score: 131 bits (330), Expect = 2.000e-35 Identity = 73/156 (46.79%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 25 KILAEVKAY--ESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQDASRLRNLAEDVEMGLSTVG 483
K+L V+A +RGG G + S+ + AP+F C CGN +Q NF D K GDTIC+G D GCG VVQD K SMYR+FEGE DRSHHGPAPN LYS HNM+T+I G ++DA LR ++E VE+ LS +G
Sbjct: 3 KVLCAVEAELARARGGAAGPD-SDVRAETTLRGAPEFRCDLCGNMEQGNFVGDKKSGDTICMGKDNLGCGNVVQDRKVHEGSMYRRFEGEEDRSHHGPAPNLLYSNQHNMQTFIVGGTG---------------TKDAGALRRISESVELNLSNMG 142
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: A0A5D6YB12_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB12_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.980e-34 Identity = 64/118 (54.24%), Postives = 78/118 (66.10%), Query Frame = 1
Query: 19 VNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK 369
VN ++ +K + G E SE A +TAP+F C CGN DQ+NF D +GDTIC G DG GCGTVVQDH S YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ +
Sbjct: 107 VNDVMLLIKKMKQAGKSDADEFSELD--AEQKTAPRFRCETCGNTDQNNFITDYARGDTICNGLDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQAR 222
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: A0A835ZF02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF02_9STRA) HSP 1 Score: 134 bits (338), Expect = 5.740e-34 Identity = 76/162 (46.91%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 4 EIEGMVNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQDASRLRNLAEDVEMGLSTVGK 486
EI+ ++L EV A G E+T++ P C CGN+DQ F LDAKQGDTIC+G G GCG VV+DHKA +MYR+FEGE DRSHHG P++LYSTA+NMRT IS+G + D++RL NL+ VEM LS +GK
Sbjct: 9 EIDMHAMRVL-EVDASIQAGTAYATAAEEFTFVLPEVAVPIHTCSVCGNKDQQFFVLDAKQGDTICMGVGGAGCGAVVEDHKAHEGNMYRQFEGEVDRSHHGLPPDKLYSTAYNMRTQISKG-----------------ALDSARLANLSSYVEMNLSQMGK 152
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: A0A8K1FG42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG42_PYTOL) HSP 1 Score: 133 bits (334), Expect = 1.030e-33 Identity = 74/157 (47.13%), Postives = 93/157 (59.24%), Query Frame = 1
Query: 19 VNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQDASRLRNLAEDVEMGLSTVGK 486
VN ++ +K + G E SE A +TAP+F C CGN +Q+NF D +GDTIC G DG+GCGTVVQDH S YRKFEGE D+SHHGPAPN+L+S++HN+RT IS+ + A LR AE VEM LS +GK
Sbjct: 97 VNDVMVLIKKMKQAGKSDADEFSELD--AEQKTAPRFRCETCGNIEQNNFITDYARGDTICNGLDGRGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSSHNLRTLISQ-----------------DGEMAGNLRRAAEFVEMNLSQMGK 234
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: A0A1V9ZD07_9STRA (C2H2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD07_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.070e-33 Identity = 73/157 (46.50%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 19 VNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQDASRLRNLAEDVEMGLSTVGK 486
VN I+ +K + G E SE A + AP+F C CGN +Q+NF D +GDTIC GADG GCG VVQDH + YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ + ++ LR AE VEM LS +GK
Sbjct: 64 VNDIIQLIKKMKQAGKSDADEFSEAD--AEINAAPRFVCDVCGNSEQNNFITDYARGDTICTGADGHGCGNVVQDHIVHEGNAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQ-----------------DGEQSANLRRAAEFVEMNLSQMGK 201
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: A0A024GKS6_9STRA (C2H2-type domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GKS6_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.730e-33 Identity = 73/157 (46.50%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 19 VNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQDASRLRNLAEDVEMGLSTVGK 486
V+ ++ ++ + G E SE A +TAP+F C CGN +Q+NF D +GDTIC G DG GCGTVVQDH S YRKFEGE D+SHHGPAPN+L+ST+HN+RT IS+ + A LR AE VEM LS +GK
Sbjct: 89 VSDVMMLIRKMKQSGKSDADEFSELD--AEPKTAPRFRCENCGNTEQNNFITDYARGDTICNGPDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQ-----------------DGEMAGNLRRAAEFVEMNLSQMGK 226
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: A0A0W8C063_PHYNI (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C063_PHYNI) HSP 1 Score: 133 bits (335), Expect = 2.570e-33 Identity = 74/157 (47.13%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 19 VNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQDASRLRNLAEDVEMGLSTVGK 486
VN ++ ++ + G E SE A +TAP+F C CGN +Q+NF D +GDTIC G DG GCGTVVQDH S YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ + A LR AE VEM LS +GK
Sbjct: 259 VNDVMLLIRKMKQAGKSDADEFSELD--AEQKTAPRFRCETCGNTEQNNFITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQ-----------------DGEMAGNLRRAAEFVEMNLSQMGK 396
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: A0A2D4C348_PYTIN (C2H2-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C348_PYTIN) HSP 1 Score: 132 bits (331), Expect = 3.140e-33 Identity = 74/157 (47.13%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 19 VNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQDASRLRNLAEDVEMGLSTVGK 486
VN ++ +K + G E SE A +TAP+F C CGN +Q+NF D +GDTIC G DG+GCGTVVQDH S YRKFEGE D+SHHGPAPN+L+S+ HN+RT IS+ + A LR AE VEM LS +GK
Sbjct: 105 VNDVMQLIKKMKQAGKSDADEFSELD--ADQKTAPRFRCETCGNIEQNNFITDYARGDTICNGIDGRGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQ-----------------DGEMAGNLRRAAEFVEMNLSQMGK 242
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Match: T0QRB4_SAPDV (C2H2-type domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QRB4_SAPDV) HSP 1 Score: 131 bits (329), Expect = 4.390e-33 Identity = 72/157 (45.86%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 19 VNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNFTLDAKQGDTICLGADGQGCGTVVQDHKARR-SMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARPNKPRGHNLRIMRSSQDASRLRNLAEDVEMGLSTVGK 486
V+ I+ +K + G E SE A + AP+F C CGN +Q+NF D +GDTIC G DG+GCG VVQDH S YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ + ++ LR AE VEM LS +GK
Sbjct: 72 VSDIIQLIKKMKQAGKSDADEFSELD--AELNAAPRFVCDACGNAEQNNFITDYARGDTICTGPDGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQ-----------------DGEQSANLRRAAEFVEMNLSQMGK 209 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82480.15901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig82480.15901.1 >prot_H-elongata_contig82480.15901.1 ID=prot_H-elongata_contig82480.15901.1|Name=mRNA_H-elongata_contig82480.15901.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp MVNKILAEVKAYESRGGLQGAENSEYTYLAAVETAPQFHCPGCGNRDQSNback to top mRNA from alignment at H-elongata_contig82480:509..2739- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig82480.15901.1 ID=mRNA_H-elongata_contig82480.15901.1|Name=mRNA_H-elongata_contig82480.15901.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2231bp|location=Sequence derived from alignment at H-elongata_contig82480:509..2739- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig82480:509..2739- >mRNA_H-elongata_contig82480.15901.1 ID=mRNA_H-elongata_contig82480.15901.1|Name=mRNA_H-elongata_contig82480.15901.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=942bp|location=Sequence derived from alignment at H-elongata_contig82480:509..2739- (Himanthalia elongata Himel1 dioecious)back to top |