prot_H-elongata_contig8239.15893.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8239.15893.1
Unique Nameprot_H-elongata_contig8239.15893.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: D8LLE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE1_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 1.610e-78
Identity = 105/165 (63.64%), Postives = 133/165 (80.61%), Query Frame = 0
Query:    2 SSKPCPCFSGKPYGECCKPFHDGEKQPEPMQAMRARYAAYASAMPQYIMKSTHPEHDDFGKPGWSGELLDFCNNYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVSFDERSLFVRRD-GQWLYRSADKDYEPSVDVVSKRRFNKTARIDKPKGMPQR 165
            +S PCPCFSG PYG+CCKPFHDGEK P+P+Q MRARYAAYA  MPQ+IMK+THP+H+DF K GW   +L FCNNY+FTGL+VG PE D + P D+V+VYFTA+M GA+ GGAVSFDERS+F+  D G+WLYR+ D +Y+ SV+V+SKR++N  A+ D+P G   R
Sbjct:   12 ASAPCPCFSGNPYGDCCKPFHDGEKSPQPVQVMRARYAAYACNMPQFIMKTTHPDHEDFAKSGWRDSILVFCNNYKFTGLEVGQPEVDQDTP-DKVYVYFTAMMAGAKGGGAVSFDERSVFLLTDDGEWLYRAPDANYKESVNVISKRKYNAAAKTDRPSGFSAR 175          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: A0A6H5JTH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH4_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 2.070e-78
Identity = 107/165 (64.85%), Postives = 134/165 (81.21%), Query Frame = 0
Query:    2 SSKPCPCFSGKPYGECCKPFHDGEKQPEPMQAMRARYAAYASAMPQYIMKSTHPEHDDFGKPGWSGELLDFCNNYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVSFDERSLFVRRD-GQWLYRSADKDYEPSVDVVSKRRFNKTARIDKPKGMPQR 165
            +S PCPCFSG PYG+CCKPFHDGEK  +P+Q MRARYAAYA  MPQ+IMK+THP+H+DFGKPGW   +L FCNNY+FTGL+VG PE D + P D+V+VYFTA+M GA+ GGAVSFDERS+FV  D G+WLYR+ D +Y+ SV+V+SKR++N  A+ D+P G   R
Sbjct:   94 ASAPCPCFSGNPYGDCCKPFHDGEKSAQPVQVMRARYAAYACNMPQFIMKTTHPDHEDFGKPGWRDSILVFCNNYKFTGLEVGQPEEDQDTP-DKVYVYFTAMMAGAKVGGAVSFDERSVFVLTDDGEWLYRAPDANYKESVNVISKRKYNAAAKTDRPSGFSAR 257          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: A0A835ZDT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.320e-30
Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = 0
Query:    2 SSKPCPCFSGKPYGECCKPFHDGEK-QPEPMQAMRARYAAYASAMPQYIMKSTHPEHDDF-------GKPGWSGELLDFCNNYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVSFDERSLFV-RRDGQWLYRSADKDYEPSVDVVS 146
            +S  C C SGK Y +CC+ +HDG +  P+P+  +R+RY+AYA  +P YIM +THP+H+D+       G   W   LL+FC+ Y F GL  GA E + +      F+ FTA +    +   + F ERS F+   DG+WLY S D D+ P V + S
Sbjct:   23 ASTACVCGSGKAYQDCCRHYHDGTRFAPDPVALLRSRYSAYAYRLPDYIMATTHPDHEDYKPAKDKAGAKAWQQSLLNFCDAYTFQGLQPGALELEDDGAV--AFLNFTAKVNALSQ--RLQFVERSKFLCGGDGRWLYVSGDADFTPEVLLES 172          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: A0A6M1Z103_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1Z103_9BACT)

HSP 1 Score: 113 bits (283), Expect = 2.660e-29
Identity = 60/131 (45.80%), Postives = 76/131 (58.02%), Query Frame = 0
Query:    6 CPCFSGKPYGECCKPFHDGEKQPEPM-QAMRARYAAYASAMPQYIMKSTHPEHDDF--GKPGWSGELLDFCNNYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVSFDERSLFVRRDGQWLYRS 133
            CPC SGK Y  CC P H  E+ PE   Q MR+RY+AYA  +P+YIM +THPE+  +   +  W  E+L FC    FTGLD+       E   D  FV F A +   Q    VSF E+S F++ DG+WLYRS
Sbjct:    3 CPCHSGKSYQACCVPLHRKERLPESAEQLMRSRYSAYALQLPEYIMDTTHPENPTYLEDRSPWQIEILKFCKETTFTGLDI----LSTENRDDEAFVTFFAHLI--QNNLDVSFQEKSRFLKEDGRWLYRS 127          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: A0A7V9UIY6_9BACT (Uncharacterized protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7V9UIY6_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 1.030e-23
Identity = 51/131 (38.93%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    6 CPCFSGKPYGECCKPFHDGEKQPEPMQAMRARYAAYASAMPQYIMKSTHPEHDD--FGKPGWSGELLDFCNNYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVSFDERSLFVRRDGQWLYRSA 134
            CPC S K Y ECC+  HDG      +  MR+RY+AYA ++P+YIM++THP+H D    K  W  ++LDF    +F  LD+     + +  +D  FV F A ++  Q    +   E+S F++   QWLYR A
Sbjct:    5 CPCCSKKIYQECCQLMHDGAFPENALALMRSRYSAYALSLPEYIMRTTHPDHGDRLLNKEEWKMKILDFSRTTQFHRLDI----VNFQDGADEAFVTFIAHLS--QEKQPMQLHEKSRFLKIGSQWLYRDA 129          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: A0A2H0VN27_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 TaxID=1973935 RepID=A0A2H0VN27_9BACT)

HSP 1 Score: 98.6 bits (244), Expect = 2.640e-23
Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 0
Query:    6 CPCFSGKPYGECCKPFHDGEKQPEPMQAMRARYAAYASAMPQYIMKSTHPE--HDDFGKPGWSGELLDFCNNYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVSFDERSLFVRRDGQWLYR 132
            CPC SG  Y +CC+PFH G+  P P   +RARYAAYA  +P +I+ +THPE  + +  K  W  +L +F  +  F  L +     D E      F+ F A +   Q     +F ERS FVR +G+WLYR
Sbjct:    3 CPCHSGNDYKDCCEPFHKGKLPPTPTILLRARYAAYALNLPDFIIDTTHPECFYYEKDKDKWKKDLEEFSTSTIFKDLRILDTHEDEELG----FITFVAFIK--QGDEDATFTERSYFVREEGKWLYR 125          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: A0A7Y5NW54_9DELT (Uncharacterized protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NW54_9DELT)

HSP 1 Score: 95.9 bits (237), Expect = 2.970e-22
Identity = 54/132 (40.91%), Postives = 73/132 (55.30%), Query Frame = 0
Query:    6 CPCFSGKPYGECCKPFHDGEKQ-PEPMQAMRARYAAYASAMPQYIMKSTHPEHDDFGKPGWSGELLDF-----CNNYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVSFDERSLFVRRDGQWLY 131
            CPC SGKPYGECC+P+H   ++ P+P   MR+RY+A+A     Y++ + HPEH +  K     E+L       C ++R+TGL +     D     DR  V F A +   QRG  +SF ERS F R  G W Y
Sbjct:   13 CPCQSGKPYGECCRPYHRRTQEAPDPEALMRSRYSAFAIGEIDYLVATLHPEHAE--KKNLPEEMLRSSLRAACRDHRYTGLTILETSVD----GDRGMVRFVAKVF--QRGKDISFSERSTFERVGGAWRY 136          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: M1VH01_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VH01_CYAM1)

HSP 1 Score: 94.7 bits (234), Expect = 8.360e-21
Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 0
Query:    5 PCPCFSGKPYGECCKPFHDGEKQP-EPMQAMRARYAAYASAMPQYIMKST---HPEH-DDFGKPGWSGELLDFCNNYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVSFDERSLFVRRDGQWLYRS 133
            PC C SG+ Y  CC PFH   K P E  + +RARY+A+A  +P +IM++T   +P++ DD+ +  W  ++L+FC+ YRF G++V     +  A  D  F+ F A +     G    F ERS FV+  G+W+Y S
Sbjct:  103 PCACGSGRTYRNCCMPFHTNSKAPAEAEELLRARYSAFAYRLPGFIMRTTSKTNPDYTDDWNR--WEADILEFCDLYRFPGMEV---LDEKTASPDVSFIQFRANLI--YEGALGFFIERSRFVKERGKWMYAS 229          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: A0A3S4VK87_ACTVI (UPF0225 protein E4J66_10125 n=2 Tax=Actinomyces TaxID=1654 RepID=A0A3S4VK87_ACTVI)

HSP 1 Score: 88.6 bits (218), Expect = 2.700e-19
Identity = 48/137 (35.04%), Postives = 66/137 (48.18%), Query Frame = 0
Query:    2 SSKPCPCFSGKPYGECCKPFHDGEKQPEPMQAMRARYAAYASAMPQYIMKSTHPEHDDFGKPGWSGELLDFCN-NYRFTGLDVGAPEADPEAPSDRVFVYFTALMTGAQRGGAVS--FDERSLFVRRDGQWLYRSAD 135
            ++ PCPC SG+ YG+CC+P HDG   P     MR+RY A+      Y+ ++ HP     G          +C+   R+TGL +             +  +  A  TG  RGG V+    ERS F RR G+WLY  AD
Sbjct:   23 TAAPCPCGSGRTYGQCCEPLHDGAPAPTAEALMRSRYTAFVVGDEDYLFRTWHPRTRPEGP---------YCHPGTRWTGLTIHETAGGGTDDETGIVEFTAAYRTGDGRGGVVADALRERSRFTRRAGRWLYLDAD 150          
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Match: A0A7S0HEU9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEU9_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 3.220e-19
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 0
Query:    6 CPCFSGKPYGECCKPFHDGEKQPEPMQAMRARYAAYASAMPQYIMKSTHPEHDDF--GKPGWSGELLDFCNNYRFTGLDVGAPEADPEAP---SDRVFVYFTALMTGAQRGGAVSFD--ERSLFVR-RDGQWLYRSADKDYEPSVDV 144
            C C S + Y  CC+P H+     EP+  +RARY AYA  +P +++ +T P+H+++   +  W  +LL FC+ +   GL+VG  +A   A    +D V V F A +   Q+G     D  E S  VR   G WLY   D +YE + + 
Sbjct:  122 CACGSAQSYEACCQPCHEAGLATEPLALIRARYTAYAYRLPDFLIDTTSPDHEEWETDRTAWKKDLLTFCDTFVCEGLEVGQQQAGDAAAVGGADAVQVPFRAKLV--QKGAIKMLDLLETSTLVRGAAGGWLYAKGDVEYEATPEA 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8239.15893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLE1_ECTSI1.610e-7863.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTH4_9PHAE2.070e-7864.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDT4_9STRA2.320e-3040.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6M1Z103_9BACT2.660e-2945.80Uncharacterized protein n=1 Tax=Chlamydiae bacteri... [more]
A0A7V9UIY6_9BACT1.030e-2338.93Uncharacterized protein n=1 Tax=Parachlamydiaceae ... [more]
A0A2H0VN27_9BACT2.640e-2340.31Uncharacterized protein n=1 Tax=Chlamydiae bacteri... [more]
A0A7Y5NW54_9DELT2.970e-2240.91Uncharacterized protein n=1 Tax=Polyangiaceae bact... [more]
M1VH01_CYAM18.360e-2138.81Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A3S4VK87_ACTVI2.700e-1935.04UPF0225 protein E4J66_10125 n=2 Tax=Actinomyces Ta... [more]
A0A7S0HEU9_9EUKA3.220e-1934.69Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 4..137
e-value: 3.6E-27
score: 97.5
NoneNo IPR availablePFAMPF17775UPF0225coord: 30..133
e-value: 2.2E-19
score: 70.1
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 28..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8239contigH-elongata_contig8239:1342..2720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8239.15893.1mRNA_H-elongata_contig8239.15893.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8239 1330..2720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8239.15893.1 ID=prot_H-elongata_contig8239.15893.1|Name=mRNA_H-elongata_contig8239.15893.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
MSSKPCPCFSGKPYGECCKPFHDGEKQPEPMQAMRARYAAYASAMPQYIM
KSTHPEHDDFGKPGWSGELLDFCNNYRFTGLDVGAPEADPEAPSDRVFVY
FTALMTGAQRGGAVSFDERSLFVRRDGQWLYRSADKDYEPSVDVVSKRRF
NKTARIDKPKGMPQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032710NTF2-like_dom_sf