prot_H-elongata_contig82273.15883.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82273.15883.1
Unique Nameprot_H-elongata_contig82273.15883.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: D7FT61_ECTSI (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT61_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.510e-20
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLLQ 52
            MQMVRDILMYMDRT+V+FN KMPVYEMGLVVFRDTVARH KVK RLQ LLLQ
Sbjct:  109 MQMVRDILMYMDRTYVSFNKKMPVYEMGLVVFRDTVARHDKVKGRLQSLLLQ 160          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A7S2BUF6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BUF6_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.270e-14
Identity = 35/52 (67.31%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLLQ 52
            M MVRDILMYMDRT+VA N K+ VY++GL++FRDTVARH +VK RL+ +LL+
Sbjct:    2 MMMVRDILMYMDRTYVAQNKKVAVYDLGLIIFRDTVARHEQVKDRLRHILLE 53          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A067CH64_SAPPC (CULLIN_2 domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH64_SAPPC)

HSP 1 Score: 70.9 bits (172), Expect = 5.160e-13
Identity = 33/52 (63.46%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLLQ 52
            M M+RDILMYMDRT+V    K+P+Y+MGL++FRDT+ARH  VK RL+ +LLQ
Sbjct:  109 MTMIRDILMYMDRTYVPGKRKVPIYDMGLLLFRDTIARHPNVKDRLRWMLLQ 160          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A485KXF9_9STRA (Aste57867_12984 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXF9_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.160e-13
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLLQ 52
            M M+RDILMYMDRT+VA   KMP+Y+MGLV+FRD++ RH +VK RL+  LLQ
Sbjct:  109 MTMIRDILMYMDRTYVAQKRKMPIYDMGLVLFRDSIVRHPQVKDRLKWHLLQ 160          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A6G0XWZ6_9STRA (CULLIN_2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWZ6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.320e-12
Identity = 33/52 (63.46%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLLQ 52
            M M+RDILMYMDRT+V+   KMP+Y+MGLV+FRD++ RH +VK RL+  LLQ
Sbjct:  109 MTMIRDILMYMDRTYVSQKRKMPIYDMGLVLFRDSIVRHPQVKDRLKWHLLQ 160          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A7S2W0A7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0A7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.590e-12
Identity = 32/52 (61.54%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLLQ 52
            M MVRDILMYMDRTFVA   + PVY MGL++FR+T+ RH +V+ RL+++LL+
Sbjct:  108 MVMVRDILMYMDRTFVAQQKRTPVYAMGLILFRETIERHPQVRDRLRQILLE 159          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A4D9CTV1_9STRA (CULLIN_2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTV1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-11
Identity = 33/51 (64.71%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLL 51
            M MVRDILMYMDRT+V  +NK  VY++GL +FRD +ARH +VK RL+ LLL
Sbjct:   91 MSMVRDILMYMDRTYVPQHNKTKVYDLGLRIFRDAIARHPQVKDRLRSLLL 141          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A7S3NMJ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMJ6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.990e-11
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLL 51
            M+M+RDILMYMDRTF   N K+ VY+MGLV FR  V RH ++  RLQ LLL
Sbjct:  157 MEMIRDILMYMDRTFATQNKKLQVYDMGLVEFRSAVTRHEEIGPRLQALLL 207          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A1V9ZID9_9STRA (Transmembrane protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZID9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.000e-11
Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLLQ 52
            M M+RDILMYMDRT+V    K+P+Y+MG ++FRD +ARH  VK RL+ +LLQ
Sbjct:  116 MTMIRDILMYMDRTYVPGKRKVPIYDMGQLLFRDLIARHPDVKDRLRWILLQ 167          
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Match: A0A024UW69_9STRA (CULLIN_2 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UW69_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.090e-11
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLLLQ 52
            M M+RDILMYMDR +     K+ +Y++GLVVFRDT+ RH KVK RL+ LLLQ
Sbjct:  109 MSMIRDILMYMDRNYALPKRKLLIYDIGLVVFRDTIPRHPKVKDRLKWLLLQ 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82273.15883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT61_ECTSI2.510e-2088.46CULLIN_2 domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2BUF6_9STRA2.270e-1467.31Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A067CH64_SAPPC5.160e-1363.46CULLIN_2 domain-containing protein n=3 Tax=Saprole... [more]
A0A485KXF9_9STRA5.160e-1365.38Aste57867_12984 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XWZ6_9STRA1.320e-1263.46CULLIN_2 domain-containing protein n=1 Tax=Aphanom... [more]
A0A7S2W0A7_9STRA4.590e-1261.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9CTV1_9STRA1.170e-1164.71CULLIN_2 domain-containing protein n=2 Tax=Monodop... [more]
A0A7S3NMJ6_9STRA2.990e-1162.75Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1V9ZID9_9STRA3.000e-1159.62Transmembrane protein (Fragment) n=1 Tax=Thraustot... [more]
A0A024UW69_9STRA4.090e-1161.54CULLIN_2 domain-containing protein n=2 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001373Cullin, N-terminalPFAMPF00888Cullincoord: 1..51
e-value: 7.1E-10
score: 38.1
NoneNo IPR availableGENE3D1.20.1310.10coord: 1..35
e-value: 1.0E-9
score: 40.9
NoneNo IPR availablePANTHERPTHR11932:SF74coord: 1..51
NoneNo IPR availablePANTHERPTHR11932CULLINcoord: 1..51
IPR016159Cullin repeat-like-containing domain superfamilySUPERFAMILY74788Cullin repeat-likecoord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82273contigH-elongata_contig82273:117..272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82273.15883.1mRNA_H-elongata_contig82273.15883.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82273 111..272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82273.15883.1 ID=prot_H-elongata_contig82273.15883.1|Name=mRNA_H-elongata_contig82273.15883.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MQMVRDILMYMDRTFVAFNNKMPVYEMGLVVFRDTVARHYKVKARLQRLL
LQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001373Cullin_N
IPR016159Cullin_repeat-like_dom_sf