prot_H-elongata_contig82244.15881.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82244.15881.1
Unique Nameprot_H-elongata_contig82244.15881.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82244.15881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 6..39
e-value: 6.6E-8
score: 32.5
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 1..50
e-value: 5.5E-8
score: 34.6
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 4..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82244contigH-elongata_contig82244:2422..2577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82244.15881.1mRNA_H-elongata_contig82244.15881.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82244 2422..2577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82244.15881.1 ID=prot_H-elongata_contig82244.15881.1|Name=mRNA_H-elongata_contig82244.15881.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
KKHLKCDPCSLAKRRCDGQPQCSLCVKKGIKCIYGEVRRRASFRRTKYYP
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf