prot_H-elongata_contig82208.15879.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82208.15879.1
Unique Nameprot_H-elongata_contig82208.15879.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: D8LU42_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU42_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 3.820e-61
Identity = 96/115 (83.48%), Postives = 107/115 (93.04%), Query Frame = 0
Query:    1 VFKAPCGGIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATAT 115
            + KAPCGGIPAAH+TSATP+  +KQIYKDL RAD+ REP++KLLYVTPERLGNSDSMLDFM RL+D+GMLARFVIDEAHCVSSWGHDFRPDYSKLG  KKTFP+VP+IALTATAT
Sbjct:  280 LLKAPCGGIPAAHLTSATPTTAIKQIYKDLGRADRDREPSVKLLYVTPERLGNSDSMLDFMHRLNDKGMLARFVIDEAHCVSSWGHDFRPDYSKLGYFKKTFPNVPIIALTATAT 394          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: A0A835YHS9_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHS9_9STRA)

HSP 1 Score: 157 bits (397), Expect = 4.910e-44
Identity = 75/113 (66.37%), Postives = 89/113 (78.76%), Query Frame = 0
Query:    6 CGGIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATATPEV 118
            CGGIPAA +TSAT  V+  QI++DL R + G EP +KLLYVTPER+  S    D MR L +QGMLARFVIDEAHCVS WGHDFR DY KLG++K+TFP VP +A+TATATP+V
Sbjct:   94 CGGIPAAALTSATAPVMSHQIHQDLLRCESGVEPVLKLLYVTPERVAKSGRFFDVMRSLDEQGMLARFVIDEAHCVSQWGHDFRQDYLKLGVLKQTFPHVPTLAVTATATPKV 206          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: A0A5D6YCC8_9STRA (ATP-dependent DNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCC8_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.570e-37
Identity = 69/111 (62.16%), Postives = 85/111 (76.58%), Query Frame = 0
Query:    8 GIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATATPEV 118
            GIPA +++S T   L + I ++L R    + P++KLLYVTPE+LGNS  M+D +  LH  GMLARFVIDEAHCVS WGHDFRPDY KLGL+K  FPDVP++ALTATA P+V
Sbjct:  258 GIPAGYLSSQTGITLRRAIVQELRR----KRPSLKLLYVTPEKLGNSAEMIDLLELLHGNGMLARFVIDEAHCVSQWGHDFRPDYMKLGLLKTRFPDVPLMALTATAPPKV 364          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: A0A2D4CBX1_PYTIN (ATP-dependent DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX1_PYTIN)

HSP 1 Score: 141 bits (355), Expect = 6.410e-37
Identity = 70/118 (59.32%), Postives = 89/118 (75.42%), Query Frame = 0
Query:    1 VFKAPCGGIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATATPEV 118
            + + P  GIPAA ++S T   L + I ++L    +GR PT+KLLYVTPE++  S+ M+  M+ L+  GMLARFVIDEAHCVS WGHDFRPDYSKLGL+K  FPDVP++ALTATA P+V
Sbjct:  237 LIRNPLCGIPAAFLSSQTGITLHRAIAREL----RGRFPTLKLLYVTPEKIAKSEEMMSLMQGLYANGMLARFVIDEAHCVSQWGHDFRPDYSKLGLLKDEFPDVPLMALTATAPPKV 350          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: A0A8K1CM96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM96_PYTOL)

HSP 1 Score: 140 bits (353), Expect = 8.690e-37
Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 0
Query:    8 GIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATATPEV 118
            GIPAA ++S T   L + I ++L R      P++KLLYVTPE++  S+ M++ M+ LH  GMLARFVIDEAHCVS WGHDFRPDYSKLG++K TFP+VP++ALTATA P+V
Sbjct:  228 GIPAAFLSSQTSMTLKRAIVRELRRP----RPSLKLLYVTPEKIAKSEEMMELMQILHSNGMLARFVIDEAHCVSQWGHDFRPDYSKLGILKATFPEVPLMALTATAPPKV 334          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: A0A2D4CC22_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC22_PYTIN)

HSP 1 Score: 141 bits (355), Expect = 1.550e-36
Identity = 70/118 (59.32%), Postives = 89/118 (75.42%), Query Frame = 0
Query:    1 VFKAPCGGIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATATPEV 118
            + + P  GIPAA ++S T   L + I ++L    +GR PT+KLLYVTPE++  S+ M+  M+ L+  GMLARFVIDEAHCVS WGHDFRPDYSKLGL+K  FPDVP++ALTATA P+V
Sbjct: 2028 LIRNPLCGIPAAFLSSQTGITLHRAIAREL----RGRFPTLKLLYVTPEKIAKSEEMMSLMQGLYANGMLARFVIDEAHCVSQWGHDFRPDYSKLGLLKDEFPDVPLMALTATAPPKV 2141          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: A0A4D9D6U8_9STRA (ATP-dependent DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6U8_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.050e-36
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 0
Query:    9 IPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATATPEV 118
            IPAA + S TP  L + IY+DL     GREP IKLLYVTPERL   +     ++ LH+ GMLAR V+DEAHCVS WGHDFRPD+ +LG  +K FP +P++ALTATAT EV
Sbjct:   45 IPAAVLNSTTPETLARGIYRDLGSVRMGREPAIKLLYVTPERLLGPEGFKQLVKTLHEHGMLARLVVDEAHCVSQWGHDFRPDFYRLGEFRKQFPSIPIMALTATATDEV 154          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: A0A6G0XAI7_9STRA (ATP-dependent DNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAI7_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.450e-36
Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 0
Query:    8 GIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATA 114
            GIPAA+++S T   L+K ++KDL R      PTIKLLYVTPE+L  S S++  +  L+ +GMLARFVIDEAHCV+ WGHDFRPDY+KLG +K+ FPDVPV+ALTATA
Sbjct:   96 GIPAAYLSSQTAQKLIKAVWKDLHRP----VPTIKLLYVTPEKLAASSSLIAMLEDLNRRGMLARFVIDEAHCVTQWGHDFRPDYNKLGRLKELFPDVPVMALTATA 198          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: K3WD55_GLOUD (ATP-dependent DNA helicase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD55_GLOUD)

HSP 1 Score: 139 bits (349), Expect = 5.580e-36
Identity = 68/118 (57.63%), Postives = 88/118 (74.58%), Query Frame = 0
Query:    1 VFKAPCGGIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATATPEV 118
            + + P  GIPA +++S T   L + I ++L R     +P++KLLYVTPE+LGNS  M++ +  LH  GMLARFVIDEAHCVS WGHDFRPDY KLG++K  FPDVP++ALTATA P+V
Sbjct:  289 LIRNPRCGIPAGYLSSQTGITLRRAITQELKR----NKPSLKLLYVTPEKLGNSAEMIELLEILHHNGMLARFVIDEAHCVSQWGHDFRPDYMKLGMLKTRFPDVPLMALTATAPPKV 402          
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Match: A0A1V9ZHY8_9STRA (ATP-dependent DNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHY8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 5.950e-36
Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 0
Query:    8 GIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPERLGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKKTFPDVPVIALTATA 114
            GIPAA ++S T + L K +++DL R      PT+KLLYVTPERL  SDS++  +  LH +GMLARFV+DEAHCVSSWGHDFRPDY KLG +K  FP VP++ALTATA
Sbjct:   93 GIPAAFLSSQTLAALKKAVWRDLHRPI----PTLKLLYVTPERLAASDSLIQVLESLHQRGMLARFVVDEAHCVSSWGHDFRPDYHKLGNLKDLFPSVPLMALTATA 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82208.15879.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU42_ECTSI3.820e-6183.48ATP-dependent DNA helicase n=2 Tax=Ectocarpus TaxI... [more]
A0A835YHS9_9STRA4.910e-4466.37DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A5D6YCC8_9STRA4.570e-3762.16ATP-dependent DNA helicase n=1 Tax=Pythium brassic... [more]
A0A2D4CBX1_PYTIN6.410e-3759.32ATP-dependent DNA helicase n=1 Tax=Pythium insidio... [more]
A0A8K1CM96_PYTOL8.690e-3760.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CC22_PYTIN1.550e-3659.32DNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A4D9D6U8_9STRA2.050e-3659.09ATP-dependent DNA helicase n=2 Tax=Monodopsidaceae... [more]
A0A6G0XAI7_9STRA3.450e-3662.62ATP-dependent DNA helicase n=1 Tax=Aphanomyces eut... [more]
K3WD55_GLOUD5.580e-3657.63ATP-dependent DNA helicase n=1 Tax=Globisporangium... [more]
A0A1V9ZHY8_9STRA5.950e-3662.62ATP-dependent DNA helicase n=1 Tax=Achlya hypogyna... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 3..118
e-value: 1.0E-39
score: 138.0
NoneNo IPR availablePANTHERPTHR13710:SF128ATP-DEPENDENT DNA HELICASE Q-LIKE 4Acoord: 8..118
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 8..118
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 34..116
e-value: 1.6E-6
score: 28.0
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 71..80
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..118
score: 12.798
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82208contigH-elongata_contig82208:1054..2191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82208.15879.1mRNA_H-elongata_contig82208.15879.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82208 1054..2191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82208.15879.1 ID=prot_H-elongata_contig82208.15879.1|Name=mRNA_H-elongata_contig82208.15879.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
VFKAPCGGIPAAHITSATPSVLVKQIYKDLARADKGREPTIKLLYVTPER
LGNSDSMLDFMRRLHDQGMLARFVIDEAHCVSSWGHDFRPDYSKLGLIKK
TFPDVPVIALTATATPEV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR002464DNA/RNA_helicase_DEAH_CS
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase