prot_H-elongata_contig82007.15866.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig82007.15866.1
Unique Nameprot_H-elongata_contig82007.15866.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length238
Homology
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BLAST of mRNA_H-elongata_contig82007.15866.1 vs. uniprot
Match: A0A6H5JEV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEV9_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 4.660e-85
Identity = 150/234 (64.10%), Postives = 180/234 (76.92%), Query Frame = 0 
Query:    1 MRTSHDSVGGYEWSMLLLHLAQARRVNSRMPALSIFQAAMKFIAEGGISRRDTIRYGCLTVNATVLSGDGADQDRALPLTTHEQESFKEAFPAVMVDTSLGFNVFARVSSSAVEELEMTAKASVSLLQGRPGAVFRRLFMTRSTLWRKCDAFVQARAVDGPRREDGQMKKSAEEVGEQ----EAEEEEGLLDRPLWSHVAQRVTGLLRDGLGNRCVLARPLCGAAGEASEDFQG 230
            MRTSHDS+G YEWSMLLLHL+Q RRVN+RM ALS+FQ  +KFIA+GG+S +      CLTV+  V +G   +Q     LT  E+++FK+AF AVMVDTSLGFNVFAR+SSSAV ELEMTAKAS+++LQGRPGA FRRL MTR+TLWRKCDAFVQ   V     ++G+  K AE  G        +EEEGLLD+PLW HV+ RVTG+LR+GLG+RCVLARPLCG AGEA+ DFQG
Sbjct:  399 MRTSHDSMGSYEWSMLLLHLSQTRRVNARMAALSMFQVVLKFIADGGLSSK------CLTVD--VSTGGPDEQSHKRGLTLEEEKTFKDAFAAVMVDTSLGFNVFARLSSSAVAELEMTAKASIAVLQGRPGAAFRRLLMTRTTLWRKCDAFVQVPLVSA-NADNGKRWKEAEATGTDMEKLREQEEEGLLDKPLWRHVSDRVTGILREGLGDRCVLARPLCGVAGEAAHDFQG 623
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BLAST of mRNA_H-elongata_contig82007.15866.1 vs. uniprot
Match: D7FGX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX0_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 3.210e-83
Identity = 148/233 (63.52%), Postives = 178/233 (76.39%), Query Frame = 0 
Query:    1 MRTSHDSVGGYEWSMLLLHLAQARRVNSRMPALSIFQAAMKFIAEGGISRRDTIRYGCLTVNATVLSGDGADQDRALPLTTHEQESFKEAFPAVMVDTSLGFNVFARVSSSAVEELEMTAKASVSLLQGRPGAVFRRLFMTRSTLWRKCDAFVQARAVDGPRREDGQMKKSAEEVGEQE---AEEEEGLLDRPLWSHVAQRVTGLLRDGLGNRCVLARPLCGAAGEASEDFQG 230
            MRTSHDS+G YEWSMLLLHL+Q RRVN+RM ALS+FQ  +KFIA+G +S +      CLTV+  V +G   +Q +   LT  E+++FK+AF AVMVDTSLGFNV AR+SSSAV ELEMTAKAS+++LQGRPGA FRRL MTR+TLWRKCDAFVQ   V        + K++A    + E    EEEEGLLDRPLW HV+ RVTG+LR+GLG+RCVLARPLCG AGEA+ DFQG
Sbjct:  394 MRTSHDSMGSYEWSMLLLHLSQTRRVNARMAALSMFQVVLKFIADGELSSK------CLTVD--VSTGGPDEQSQRRGLTLEEEKTFKDAFAAVMVDTSLGFNVLARLSSSAVAELEMTAKASIAVLQGRPGAAFRRLLMTRTTLWRKCDAFVQVPLVSADADNGKRWKEAAATGTDMEKLRGEEEEGLLDRPLWRHVSDRVTGILREGLGDRCVLARPLCGVAGEAAHDFQG 618
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig82007.15866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEV9_9PHAE4.660e-8564.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGX0_ECTSI3.210e-8363.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035367Nrap protein, domain 2PFAMPF17403Nrap_D2coord: 6..141
e-value: 3.8E-16
score: 59.2
NoneNo IPR availableGENE3D1.10.1410.10coord: 1..144
e-value: 4.7E-10
score: 41.2
IPR005554NOL6/Upt22PANTHERPTHR17972NUCLEOLAR RNA-ASSOCIATED PROTEINcoord: 5..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig82007contigH-elongata_contig82007:277..2756 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig82007.15866.1mRNA_H-elongata_contig82007.15866.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig82007 250..2756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig82007.15866.1 ID=prot_H-elongata_contig82007.15866.1|Name=mRNA_H-elongata_contig82007.15866.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp
MRTSHDSVGGYEWSMLLLHLAQARRVNSRMPALSIFQAAMKFIAEGGISR
RDTIRYGCLTVNATVLSGDGADQDRALPLTTHEQESFKEAFPAVMVDTSL
GFNVFARVSSSAVEELEMTAKASVSLLQGRPGAVFRRLFMTRSTLWRKCD
AFVQARAVDGPRREDGQMKKSAEEVGEQEAEEEEGLLDRPLWSHVAQRVT
GLLRDGLGNRCVLARPLCGAAGEASEDFQGERGNGCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035367Nrap_D2
IPR005554NOL6/Upt22