mRNA_H-elongata_contig81907.15858.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: D7FUV6_ECTSI (Predicted ATPase of the ABC class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV6_ECTSI) HSP 1 Score: 185 bits (469), Expect = 7.660e-57 Identity = 89/100 (89.00%), Postives = 95/100 (95.00%), Query Frame = 1
Query: 4 VRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALEAEKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYSPK 303
VRAEDGRCVN VDI+PFIDNLPFGKST FTTPDASGSTSQATNI+EALEAEKEPITPFI++VRALY+T+ VSSILVIGGCGDYFEVADTVIMMDCY PK
Sbjct: 17 VRAEDGRCVNCVDITPFIDNLPFGKSTDQFTTPDASGSTSQATNIVEALEAEKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPK 116
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: A0A6H5JP10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP10_9PHAE) HSP 1 Score: 170 bits (430), Expect = 2.060e-47 Identity = 89/130 (68.46%), Postives = 96/130 (73.85%), Query Frame = 1
Query: 1 QVRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALEA-----------------------------EKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYSPK 303
+VRAEDGRCVN VDI+PFIDNLPFGKST FTTPDASGSTSQATNI+EALEA EKEPITPFI++VRALY+T+ VSSILVIGGCGDYFEVADTVIMMDCY PK
Sbjct: 452 KVRAEDGRCVNCVDITPFIDNLPFGKSTDQFTTPDASGSTSQATNIVEALEAGCTTLLVDEDTCATNFMIRDVRMQMLVAKEKEPITPFISRVRALYETMSVSSILVIGGCGDYFEVADTVIMMDCYVPK 581
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: A0A6U1P3D5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1P3D5_CYCTE) HSP 1 Score: 134 bits (338), Expect = 4.690e-37 Identity = 73/122 (59.84%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 19 GRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALEA-----------------------------EKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYS 297
GR V VDISPFI NLPFGK T F+TPDASGSTSQA+NI+EALEA EKEPITPF+ KVRALY+ +VSSILVIGG GDYF VADTV+MMDCY+
Sbjct: 1 GRSVTAVDISPFIANLPFGKDTTCFSTPDASGSTSQASNIVEALEAGADLLLVDEDTCATNFMIRDEKMIQLVAAEKEPITPFVQKVRALYEERQVSSILVIGGSGDYFSVADTVVMMDCYT 122
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: A0A7S2ZE49_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZE49_9RHOD) HSP 1 Score: 140 bits (353), Expect = 5.570e-37 Identity = 72/129 (55.81%), Postives = 89/129 (68.99%), Query Frame = 1
Query: 1 QVRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALEA-----------------------------EKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYSP 300
++RAEDGR V +VDISPFI+NLPF KSTK F+TPDASGSTSQA NIIEA++A +KEPITPFI+++R +Y+ + +S+ILVIGG GDYF+VAD VIMMDCY P
Sbjct: 311 KIRAEDGRSVTSVDISPFINNLPFQKSTKSFSTPDASGSTSQAANIIEAVQAGTKCLLVDEDTCATNFMIRDARMQELVAPDKEPITPFISRIRTMYEHMGISTILVIGGAGDYFDVADHVIMMDCYKP 439
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: A0A6T7JH83_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JH83_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.000e-36 Identity = 71/128 (55.47%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 1 QVRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALEA-----------------------------EKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYS 297
++RAEDGR V++VDISPFI NLPFGK T FTT DASGSTSQA+NI+EA+E +KEPITPF+ KVR LY+ +SSILVIGGCGDYF+VAD V+MMD Y+
Sbjct: 50 KIRAEDGRAVHSVDISPFITNLPFGKGTHCFTTADASGSTSQASNIVEAIEVGAEALIVDEDTCATNFMIRDDKMMELVAKDKEPITPFVRKVRPLYEEKGISSILVIGGCGDYFDVADRVVMMDSYA 177
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: A0A2R5G7R3_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7R3_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.290e-36 Identity = 77/129 (59.69%), Postives = 88/129 (68.22%), Query Frame = 1
Query: 1 QVRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALEA-----------------------------EKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYSP 300
+VRAEDGR V++V+ISPFI NLPFG+ T F+T DASGSTSQATNI+EALEA +KEPI PFI+KVRALYDT VS+ILVIGG GDYFEVADTV+MMD Y P
Sbjct: 374 KVRAEDGRNVSSVNISPFISNLPFGRDTTCFSTSDASGSTSQATNILEALEAGADTLLIDEDTCATNFMIRDERMMELVSNDKEPIKPFISKVRALYDTHGVSTILVIGGAGDYFEVADTVVMMDSYKP 502
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: A0A2B4RUN5_STYPI (Uncharacterized protein n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4RUN5_STYPI) HSP 1 Score: 138 bits (348), Expect = 3.640e-36 Identity = 75/129 (58.14%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 4 VRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALE-----------------------------AEKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYSPK 303
+RAEDGR + VDI PFI+NLPFG+ T F T DASGSTSQA NI+EALE AEKEPITPFI+KVR+LYD VSSILVIGG GDYF+VAD VIMMDCYS +
Sbjct: 353 IRAEDGRSIEKVDIRPFINNLPFGRDTSRFCTQDASGSTSQAANIVEALETGTKCLLIDEDTSATNFMIRDARMQKLVAAEKEPITPFISKVRSLYDDFGVSSILVIGGSGDYFQVADHVIMMDCYSSR 481
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: A0A7S4WCI1_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WCI1_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.170e-35 Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 QVRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALEA-----------------------------EKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYS 297
++RAEDGRCV+ V+ISPFI NLPFGK+T+ F++ DASGSTSQA+NIIEA+E +KEPITPF+ KVR+LY VSSILVIGG GDYF+VAD V+MMDCY+
Sbjct: 121 KIRAEDGRCVSAVNISPFIGNLPFGKTTECFSSMDASGSTSQASNIIEAIEVGATALLVDEDTCATNFMIRDDKMMELVAKDKEPITPFVRKVRSLYTEKGVSSILVIGGSGDYFDVADHVVMMDCYT 248
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: UPI001CF4462B (uncharacterized protein LOC114971207 isoform X1 n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF4462B) HSP 1 Score: 137 bits (344), Expect = 1.380e-35 Identity = 75/129 (58.14%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 4 VRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALE-----------------------------AEKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYSPK 303
VRAEDGR + VDI PFI+NLPFG+ T F+T DASGSTSQA NIIEALE AEKEPITPFI+KVR+L++ VSSILVIGG GDYF+VAD VIMMDCYS +
Sbjct: 362 VRAEDGRSIEKVDIRPFINNLPFGRDTSRFSTQDASGSTSQAANIIEALETGAKSLLIDEDTSATNFMIRDSRMQKLVAAEKEPITPFISKVRSLFEDFGVSSILVIGGSGDYFQVADHVIMMDCYSAR 490
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Match: UPI0009E60759 (uncharacterized protein LOC110050552 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E60759) HSP 1 Score: 135 bits (340), Expect = 2.110e-35 Identity = 73/127 (57.48%), Postives = 83/127 (65.35%), Query Frame = 1
Query: 4 VRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALEA-----------------------------EKEPITPFINKVRALYDTLKVSSILVIGGCGDYFEVADTVIMMDCYS 297
+RAEDGR + VDI PFI+NLPFG+ T F+T DASGSTSQA NIIEALE EKEPITPFI+KVR+LY+ VSSILVIGG GDYF+VAD V+MMDCYS
Sbjct: 247 IRAEDGRSIEKVDIRPFINNLPFGRDTSRFSTQDASGSTSQAANIIEALETGSKCLLIDEDTSATNFMIRDARMQQLVATEKEPITPFISKVRSLYEDFVVSSILVIGGSGDYFQVADHVVMMDCYS 373 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81907.15858.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81907.15858.1 >prot_H-elongata_contig81907.15858.1 ID=prot_H-elongata_contig81907.15858.1|Name=mRNA_H-elongata_contig81907.15858.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp QVRAEDGRCVNTVDISPFIDNLPFGKSTKGFTTPDASGSTSQATNIIEALback to top mRNA from alignment at H-elongata_contig81907:483..2213- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81907.15858.1 ID=mRNA_H-elongata_contig81907.15858.1|Name=mRNA_H-elongata_contig81907.15858.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1731bp|location=Sequence derived from alignment at H-elongata_contig81907:483..2213- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81907:483..2213- >mRNA_H-elongata_contig81907.15858.1 ID=mRNA_H-elongata_contig81907.15858.1|Name=mRNA_H-elongata_contig81907.15858.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=606bp|location=Sequence derived from alignment at H-elongata_contig81907:483..2213- (Himanthalia elongata Himel1 dioecious)back to top |