mRNA_H-elongata_contig81882.15857.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig81882.15857.1
Unique NamemRNA_H-elongata_contig81882.15857.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: D8LF03_ECTSI (Acetyl-coenzyme A synthetase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF03_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 2.290e-136
Identity = 191/224 (85.27%), Postives = 207/224 (92.41%), Query Frame = 1
Query:   10 DAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGEKVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHV 681
            DA SKW+FT DEG+RGGKTLHLK IVDKAVE ADCVEKVL+ + TG KVP+  +RDV +SEMLPRM+PYCPCE MDSEDLLFILYTSGSTG PKGVAHTTAGYLLY  MTTKHAFGL+EGD+FACVAD+GWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVV+RHKVTQFYTAPTAIRALM  GP+IIS+YDLS+LR+LGSVGEPINPEAWRWY EHV
Sbjct:  212 DANSKWVFTTDEGRRGGKTLHLKSIVDKAVEDADCVEKVLVITATGAKVPMG-KRDVQMSEMLPRMRPYCPCETMDSEDLLFILYTSGSTGRPKGVAHTTAGYLLYTGMTTKHAFGLEEGDVFACVADVGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVQRHKVTQFYTAPTAIRALMSCGPEIISDYDLSSLRVLGSVGEPINPEAWRWYNEHV 434          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: A0A835ZK08_9STRA (Acetyl-coenzyme A synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK08_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.790e-116
Identity = 163/224 (72.77%), Postives = 188/224 (83.93%), Query Frame = 1
Query:   10 DAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGEKVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHV 681
            +A  K++ TADEGKRGGKT+ LK+IVD A     CV+ V +F  T   VP    RDV +SE+LP M+PYCPCE MDSED LFILYTSGSTG PKG+AHTTAGYLL+ A+TTKH F LKEGD++ACVAD+GWITGHSYIVYGPL+NG TSLMFESTP+YP+HGRYWD+V+ HKV QFYTAPTAIRALMRFGP+I   YDLS+LR+LG+VGEPINPEAWRWY EHV
Sbjct:  183 NASCKFVMTADEGKRGGKTIPLKRIVDAACSGCPCVKTVFVFKNTCADVPFAATRDVWMSELLPNMRPYCPCEAMDSEDTLFILYTSGSTGQPKGLAHTTAGYLLHTALTTKHVFDLKEGDVYACVADVGWITGHSYIVYGPLINGTTSLMFESTPLYPDHGRYWDLVQTHKVNQFYTAPTAIRALMRFGPEITEKYDLSSLRVLGTVGEPINPEAWRWYNEHV 406          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: A0A7S2C0C2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C0C2_9STRA)

HSP 1 Score: 347 bits (889), Expect = 3.080e-115
Identity = 162/227 (71.37%), Postives = 190/227 (83.70%), Query Frame = 1
Query:    1 RSQDAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGEKVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHV 681
            R + AKSKW+F  DEGKRGGKTL LK+IVD+A E    VEKV ++  TG  V     RD  ++E+  + +PYCPCE MDSEDL+FIL+TSGSTG PKGV+H+TAGYLLYAAMTTK  F L+EGDI+ACVAD GWITGHSYIVYGPLVNG T++MFESTP YPNHGRYWD+V++HKVTQFYTAPTAIRALMRFG +++  YDLSTLR+LG+VGEPINPEAW+WYYE V
Sbjct:  205 RIEYAKSKWVFVTDEGKRGGKTLPLKRIVDQACEGLTVVEKVFVYKRTGGDVDWVEGRDFWMNELAAKQRPYCPCEFMDSEDLMFILFTSGSTGKPKGVSHSTAGYLLYAAMTTKVNFDLREGDIYACVADCGWITGHSYIVYGPLVNGTTTVMFESTPTYPNHGRYWDLVQKHKVTQFYTAPTAIRALMRFGDEMVGKYDLSTLRVLGTVGEPINPEAWKWYYEVV 431          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: A0A7S3XKN4_HETAK (Acetyl-coenzyme A synthetase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKN4_HETAK)

HSP 1 Score: 348 bits (894), Expect = 2.670e-114
Identity = 162/225 (72.00%), Postives = 189/225 (84.00%), Query Frame = 1
Query:    1 RSQDAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGE-KVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYY 672
            R  D +SKW+FT D+G RGG+ L LKKIVDKAVE A CVEKV MFS TG  +VP     DV + E+    +PYCP E MDSEDLLF+LYTSGSTG PKG+AH TAGYL Y A TT+++F L+EGD+FACVAD+GWITGHSYIVYGPLVNGAT+LMFESTPMYP+HGRYWD+V+RHK+TQFYTAPTAIRALMRFGP+ +  YD S+LR+LG+VGEPINPEAWRWY+
Sbjct:  142 RINDGQSKWVFTTDQGLRGGRVLELKKIVDKAVEGAPCVEKVFMFSRTGAAEVPFREGVDVRMDELARAQRPYCPAEPMDSEDLLFLLYTSGSTGRPKGLAHATAGYLAYTAFTTQNSFQLQEGDVFACVADVGWITGHSYIVYGPLVNGATTLMFESTPMYPDHGRYWDMVQRHKITQFYTAPTAIRALMRFGPEKVKEYDRSSLRVLGTVGEPINPEAWRWYH 366          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: K8YU91_NANGC (Acetyl-coenzyme A synthetase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU91_NANGC)

HSP 1 Score: 342 bits (878), Expect = 4.490e-112
Identity = 159/227 (70.04%), Postives = 190/227 (83.70%), Query Frame = 1
Query:    1 RSQDAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGEKVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHV 681
            R  D  SKW+ T DEGKRGGKTL LK+IVDKA+++A  V+   +F  TG  V   P RDV +SE++ + +PYCP E MDSEDLLFILYTSGSTG PKGVAHTTAGYLL+AAMT K  F L+EGD++ACVAD GWITGHSYIVYGPLVNGAT+L+FES P YPNH RYWD+++RH+VTQFYTAPTAIRALMR+G + I+++D S+LR+LGSVGEPINPEAW+WY+EHV
Sbjct:  129 RINDTNSKWVMTTDEGKRGGKTLPLKQIVDKALKEAPSVQHCFVFERTGAPVDWVPGRDVKMSEVMAQQRPYCPAETMDSEDLLFILYTSGSTGKPKGVAHTTAGYLLFAAMTHKTVFDLQEGDVYACVADCGWITGHSYIVYGPLVNGATTLLFESIPTYPNHCRYWDLIQRHRVTQFYTAPTAIRALMRYGTEDIASFDRSSLRVLGSVGEPINPEAWKWYFEHV 355          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: A0A812ZQS5_9DINO (FacA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZQS5_9DINO)

HSP 1 Score: 333 bits (855), Expect = 1.150e-111
Identity = 154/224 (68.75%), Postives = 182/224 (81.25%), Query Frame = 1
Query:   10 DAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGEKVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHV 681
            DAK KW+ TAD+G RGGK + LKKI D+AV +  CVE V +F  T   +  +P RDV ++E L R +PYCPCE MDSED LF+LYTSGSTG PKGV HTTAGY LYA +T K+ F  + GD+F CVAD GWITGHSYIVYGPL+NGAT+LMFESTPMYPN  RYWD+V+RHKVTQFYTAPTAIRALMR+G + ++ YDLS+LR+LG+VGEPINPEAWRWY+E V
Sbjct:  135 DAKCKWVITADQGLRGGKVIPLKKITDEAVNQCTCVEHVFVFQRTSADITYYP-RDVKMNENLKRFRPYCPCEVMDSEDTLFLLYTSGSTGKPKGVLHTTAGYCLYAGLTQKYVFDYRPGDVFGCVADCGWITGHSYIVYGPLLNGATTLMFESTPMYPNPSRYWDLVDRHKVTQFYTAPTAIRALMRYGDEPVAKYDLSSLRVLGTVGEPINPEAWRWYFEVV 357          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: F0WMM9_9STRA (Acetyl-coenzyme A synthetase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMM9_9STRA)

HSP 1 Score: 336 bits (862), Expect = 3.800e-109
Identity = 156/228 (68.42%), Postives = 190/228 (83.33%), Query Frame = 1
Query:    1 RSQDAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGE-KVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHV 681
            R QDA+SKWIFT+DEGKRGG+TL LK+IVD+AVE  D VE V +F  T    VP+ P RDV ++  LPR +PYCP E MDSEDLLFILYTSGSTG+PKGVAH+TAGYLLY+ +T K+ F L+E D+F C+AD GWITGH+Y +YG L NG T+++FESTPM+P+HGRYWD+++RHKVT+FYTAPTAIR+LM  G D I NYDLSTL++LGSVGEPINPEAW+WYYE +
Sbjct:  174 RIQDARSKWIFTSDEGKRGGRTLPLKQIVDRAVEGLDFVENVFVFRRTNSPNVPIVPPRDVDMTTSLPRFRPYCPAEWMDSEDLLFILYTSGSTGSPKGVAHSTAGYLLYSMLTAKYTFDLQENDVFGCMADCGWITGHTYNIYGTLCNGTTTVLFESTPMFPDHGRYWDLIQRHKVTKFYTAPTAIRSLMACGNDKIKNYDLSTLKLLGSVGEPINPEAWKWYYEVI 401          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: A0A067CYQ6_SAPPC (Acetyl-coenzyme A synthetase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CYQ6_SAPPC)

HSP 1 Score: 333 bits (855), Expect = 1.480e-107
Identity = 155/227 (68.28%), Postives = 188/227 (82.82%), Query Frame = 1
Query:   10 DAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGE-KVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHVRD 687
            DA+SKW+FTADEGKRGG+TL LKK VD+A+     V+ V +F  T   KVP HP+ DV ++++LP M+PYCP E MDSEDL+FILYTSGSTG PKGVAHTT GYL YAA T K+ F L+E D++ACVAD GWITGHSYIVYGPLVNGAT++MFESTPMYP+ GRYWD+VER+K+T+FYTAPTAIRALM  G + +  YD S+L++LG+VGEPINPEAW+WY+E V D
Sbjct:  224 DAQSKWVFTADEGKRGGRTLPLKKTVDEAIHGVHVVKNVFVFKRTNNPKVPFHPKIDVDMTKVLPLMRPYCPAEWMDSEDLMFILYTSGSTGKPKGVAHTTGGYLTYAATTCKYTFDLQEDDVYACVADCGWITGHSYIVYGPLVNGATTVMFESTPMYPDCGRYWDLVERYKITKFYTAPTAIRALMAHGTEFVKKYDRSSLKVLGTVGEPINPEAWKWYFEVVGD 450          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: A0A2P4XMF6_9STRA (Acetyl-coenzyme A synthetase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XMF6_9STRA)

HSP 1 Score: 332 bits (851), Expect = 2.080e-107
Identity = 151/224 (67.41%), Postives = 183/224 (81.70%), Query Frame = 1
Query:   10 DAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGEKVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHV 681
            DA+++W+FTADEG+RGG+TL LK  VD A++  D V +V +F  T   V ++PQ DV +   LPR +PYC  E MD+EDLLFILYTSGSTGTPKG+AHTT GYLLYA MTTK+AF + + D+FAC AD GWITGHSY+VYGPL NG T+++FESTP YPN GRYWD+V+RHKVTQFYTAPTAIR+LM  G DI+  YDLS+L++LGSVGEPINPEAW+WYYE V
Sbjct:  184 DARTQWVFTADEGRRGGRTLPLKNTVDTAIQNLDFVRRVFVFKRTHNTVKMNPQIDVDMENELPRHRPYCRAEFMDAEDLLFILYTSGSTGTPKGIAHTTGGYLLYAMMTTKYAFDIHDDDVFACAADCGWITGHSYVVYGPLANGITTVLFESTPTYPNEGRYWDLVQRHKVTQFYTAPTAIRSLMAHGRDIVREYDLSSLKVLGSVGEPINPEAWKWYYEVV 407          
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Match: H3GB63_PHYRM (Acetyl-coenzyme A synthetase n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3GB63_PHYRM)

HSP 1 Score: 331 bits (849), Expect = 4.150e-107
Identity = 157/225 (69.78%), Postives = 185/225 (82.22%), Query Frame = 1
Query:   10 DAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCT-GEKVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVAHTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGATSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNYDLSTLRILGSVGEPINPEAWRWYYEHV 681
            DA+S+W+FTADEGKRGG+TL LK+IVD AV   D V KV +F  T   +V ++P  DV + E L R +PYCP E M+SEDL+FILYTSGSTGTPKG+AHTTAGYLLY  +T K+ F + + DIFACVAD GWITGHSYI+YGPL NG T++MFESTPMYP+HGRYWD+++RHKVT+FYTAPTAIRALM  G D I  YDLSTL+ILGSVGEPINPEAW+WYYE V
Sbjct:  183 DARSQWVFTADEGKRGGRTLPLKQIVDHAVNGLDFVRKVFVFKRTHNPEVKMNPGIDVDMDEELLRHRPYCPAEFMNSEDLMFILYTSGSTGTPKGIAHTTAGYLLYTMLTAKYTFDIHDDDIFACVADAGWITGHSYIIYGPLANGVTTVMFESTPMYPDHGRYWDLIQRHKVTKFYTAPTAIRALMARGNDKIKEYDLSTLKILGSVGEPINPEAWKWYYEVV 407          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81882.15857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF03_ECTSI2.290e-13685.27Acetyl-coenzyme A synthetase n=2 Tax=Ectocarpus Ta... [more]
A0A835ZK08_9STRA1.790e-11672.77Acetyl-coenzyme A synthetase n=1 Tax=Tribonema min... [more]
A0A7S2C0C2_9STRA3.080e-11571.37Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3XKN4_HETAK2.670e-11472.00Acetyl-coenzyme A synthetase n=1 Tax=Heterosigma a... [more]
K8YU91_NANGC4.490e-11270.04Acetyl-coenzyme A synthetase n=3 Tax=Monodopsidace... [more]
A0A812ZQS5_9DINO1.150e-11168.75FacA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
F0WMM9_9STRA3.800e-10968.42Acetyl-coenzyme A synthetase n=1 Tax=Albugo laibac... [more]
A0A067CYQ6_SAPPC1.480e-10768.28Acetyl-coenzyme A synthetase n=3 Tax=Saprolegniace... [more]
A0A2P4XMF6_9STRA2.080e-10767.41Acetyl-coenzyme A synthetase n=1 Tax=Phytophthora ... [more]
H3GB63_PHYRM4.150e-10769.78Acetyl-coenzyme A synthetase n=23 Tax=Peronosporac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81882contigH-elongata_contig81882:456..2491 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score409.1
Seed ortholog evalue1.4e-111
Seed eggNOG ortholog2880.D8LF03
Preferred nameACSS1
KEGG rclassRC00004,RC00012,RC00043,RC00070,RC02746,RC02816
KEGG koko:K01895
KEGG ReactionR00235,R00236,R00316,R00926,R01354
KEGG Pathwayko00010,ko00620,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00357
GOsGO:0000166,GO:0001302,GO:0003674,GO:0003824,GO:0003987,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006066,GO:0006067,GO:0006069,GO:0006082,GO:0006083,GO:0006084,GO:0006085,GO:0006091,GO:0006113,GO:0006139,GO:0006163,GO:0006164,GO:0006325,GO:0006464,GO:0006473,GO:0006475,GO:0006629,GO:0006631,GO:0006633,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015976,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016053,GO:0016054,GO:0016208,GO:0016405,GO:0016569,GO:0016570,GO:0016573,GO:0016874,GO:0016877,GO:0016878,GO:0016879,GO:0016880,GO:0016999,GO:0017000,GO:0017001,GO:0017076,GO:0017144,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019413,GO:0019438,GO:0019538,GO:0019541,GO:0019542,GO:0019637,GO:0019654,GO:0019693,GO:0019752,GO:0030554,GO:0031224,GO:0031974,GO:0031981,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034308,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045733,GO:0046390,GO:0046394,GO:0046395,GO:0046459,GO:0046483,GO:0048869,GO:0051186,GO:0051188,GO:0051276,GO:0051790,GO:0055086,GO:0055114,GO:0070013,GO:0071616,GO:0071704,GO:0071840,GO:0072329,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615
EggNOG free text desc.synthetase
EggNOG OGsCOG0365@1,KOG1175@2759
EC6.2.1.1
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcetyl-coenzyme A synthetase
Ec32 orthologEc-21_006210.1
Exons4
Model size687
Cds size687
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81882.15857.1prot_H-elongata_contig81882.15857.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig81882 456..2491 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931226.849862-CDS-H-elongata_contig81882:455..6081622931226.849862-CDS-H-elongata_contig81882:455..608Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81882 456..608 +
1691679750.0316691-CDS-H-elongata_contig81882:455..6081691679750.0316691-CDS-H-elongata_contig81882:455..608Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81882 456..608 +
1622931226.865229-CDS-H-elongata_contig81882:1236..13261622931226.865229-CDS-H-elongata_contig81882:1236..1326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81882 1237..1326 +
1691679750.047215-CDS-H-elongata_contig81882:1236..13261691679750.047215-CDS-H-elongata_contig81882:1236..1326Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81882 1237..1326 +
1622931226.877089-CDS-H-elongata_contig81882:1492..17461622931226.877089-CDS-H-elongata_contig81882:1492..1746Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81882 1493..1746 +
1691679750.0616038-CDS-H-elongata_contig81882:1492..17461691679750.0616038-CDS-H-elongata_contig81882:1492..1746Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81882 1493..1746 +
1622931226.8917658-CDS-H-elongata_contig81882:2301..24911622931226.8917658-CDS-H-elongata_contig81882:2301..2491Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81882 2302..2491 +
1691679750.070576-CDS-H-elongata_contig81882:2301..24911691679750.070576-CDS-H-elongata_contig81882:2301..2491Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig81882 2302..2491 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig81882.15857.1

>prot_H-elongata_contig81882.15857.1 ID=prot_H-elongata_contig81882.15857.1|Name=mRNA_H-elongata_contig81882.15857.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=229bp
RSQDAKSKWIFTADEGKRGGKTLHLKKIVDKAVEKADCVEKVLMFSCTGE
KVPLHPQRDVLLSEMLPRMKPYCPCERMDSEDLLFILYTSGSTGTPKGVA
HTTAGYLLYAAMTTKHAFGLKEGDIFACVADIGWITGHSYIVYGPLVNGA
TSLMFESTPMYPNHGRYWDVVERHKVTQFYTAPTAIRALMRFGPDIISNY
DLSTLRILGSVGEPINPEAWRWYYEHVRD
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mRNA from alignment at H-elongata_contig81882:456..2491+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig81882.15857.1 ID=mRNA_H-elongata_contig81882.15857.1|Name=mRNA_H-elongata_contig81882.15857.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2036bp|location=Sequence derived from alignment at H-elongata_contig81882:456..2491+ (Himanthalia elongata Himel1 dioecious)
CGCTCGCAGGACGCCAAGAGCAAGTGGATATTTACCGCGGACGAGGGAAA GCGAGGCGGGAAGACTCTCCACCTCAAGAAGATCGTGGACAAGGCGGTGG AAAAAGCGGACTGTGTGGAGAAAGTCCTCATGTTCTCTTGCACCGGCGAA AAGGTGATAACATAGCTGTAACCGTCGGCCGGCGCGAACTCCAGAGTACC CTATCCCTAACGGACCTCGCACTACAGCGCGCGTACTCTTACTAAGCAGC CTATACTCTTGGGAGTAGCTCTAGTTAGTATGAATGTGAGTCAGTCCCCT CCAAGGTGTGTCGCAAGACACGCATCCCCGTCCTCACCCCCTCTTCTATT ATCTTGGACCTCCTGGCATCGATTGAAATATGTACTCCGGCGTCCTTACC CGTGACTTACAACGCAGTCGCCCTCGGAGATCCTTGAGAAGAATCGCGAC CATAGCTTGTGTTTTCCGTGACACCTTGTGATAAGGGGTCATACCCTGTG AGAGTAAGTGGTGGAATCCCGCCCCCGGTTACTTTTCGAGAGCCGGTTAT AGAATTCCTTCCCACGGATACGTTTCGAGGATTAGAACCCCCACGATCAG AAGAGCAAGCGTTGATGCAGTTATTAGATTTTTGAATAGCGTGCTAGAGG CTTCGCGAAGCGATCTTGAGGCATCCACGGGGAGCGATGAAGCTATTATT GGATGGCTGTTCTAGATTCGATTTTGCTTTCTTGATTCCGTGCTTCGCTG TCCCAACCCGAACTCCGCGGGCGTTGGCCAGGTCCCTCTGCATCCTCAAC GGGACGTGCTTCTGTCGGAGATGCTGCCTCGCATGAAGCCCTACTGTCCG TGTGAGCGCATGGACTCAGAGGTGACCCGATCGTTCGAATTCTCGCCGAT GTAATGTCGGTGTTGTTTTCTGTGAACCGTCGTTGTGTAGCCGGCTCTCG CTGTCTTGTCCCCCGTTGGAGACGATGGCGCTTGTCGCAATATGTACAAG GAAAAAAACGAAGCACATCCGACCGCAACTTTTACAGGATCTACTGTTCA TCCTCTACACGTCGGGTTCGACTGGCACCCCGAAGGGCGTCGCGCACACC ACTGCCGGCTACCTGCTGTACGCGGCCATGACCACGAAGCACGCATTTGG CCTGAAGGAGGGAGATATATTCGCCTGCGTTGCCGACATCGGCTGGATCA CCGGGCATTCCTACATCGTCTACGGCCCGCTGGTCAACGGAGCAACCTCG CTCATGTTTGAGTCCACGCCCATGTACCCCAACCACGGCAGGTGCTGGCC GCCGCTGAGAGCGGAACGAACTCTATTTTGTGTGTGTGAGGTCGATGGAC TGTGTTGGGGCTCCTTGGCTTGATTGAAACGTTACATGTCATAACTGTGA AAAGTTGCTTCTAGCTTACAAAAGATACCCAGGCACACCGTATCGTACCG TGGGCTACCGTGGGCTTTCGTTCCGTGAGATTCGAAACCTACCTCCTCTT TTAAGAGACTGGCTGTTTATGCGTTAGTTATGAAGCGGTGGGCGCCGGGG TGTGTACCGCAGAGCCGCCTCGCCCTCAGCGAACCCCCCGAGCGACCCCG CGACCGCCGATGCGCATCTACGGAGAAGGAAAGGAAGCCACGCGTGTGTT GCTTTCCAAGGAGACGACAAATAAAGGGCACGCACTGTAGTACATTAAGA GTGGTGACGACAGAGGAAGGCCTTTTTTTGGTGAACGTTCTGAACACGAT AGTGATGGTAACGGGCAACCCTTTTGAACGATCTTCTACCTTCCGCCCTC GTTGCGCGCGGGGTGTGTGCCCGATGTCGGGGTTGACACCGCGCAGATAC TGGGACGTGGTGGAGAGGCACAAAGTGACACAGTTCTACACCGCCCCGAC AGCCATCCGGGCTCTCATGAGATTTGGGCCGGACATTATCTCCAACTATG ACCTGAGCACGCTGCGGATCTTGGGATCGGTCGGAGAGCCGATCAATCCC GAGGCCTGGCGTTGGTATTACGAGCACGTGCGTGAC
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Coding sequence (CDS) from alignment at H-elongata_contig81882:456..2491+

>mRNA_H-elongata_contig81882.15857.1 ID=mRNA_H-elongata_contig81882.15857.1|Name=mRNA_H-elongata_contig81882.15857.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1374bp|location=Sequence derived from alignment at H-elongata_contig81882:456..2491+ (Himanthalia elongata Himel1 dioecious)
CGCTCGCAGGACGCCAAGAGCAAGTGGATATTTACCGCGGACGAGGGAAA
GCGAGGCGGGAAGACTCTCCACCTCAAGAAGATCGTGGACAAGGCGGTGG
AAAAAGCGGACTGTGTGGAGAAAGTCCTCATGTTCTCTTGCACCGGCGAA
AAGCGCTCGCAGGACGCCAAGAGCAAGTGGATATTTACCGCGGACGAGGG
AAAGCGAGGCGGGAAGACTCTCCACCTCAAGAAGATCGTGGACAAGGCGG
TGGAAAAAGCGGACTGTGTGGAGAAAGTCCTCATGTTCTCTTGCACCGGC
GAAAAGGTCCCTCTGCATCCTCAACGGGACGTGCTTCTGTCGGAGATGCT
GCCTCGCATGAAGCCCTACTGTCCGTGTGAGCGCATGGACTCAGAGGTCC
CTCTGCATCCTCAACGGGACGTGCTTCTGTCGGAGATGCTGCCTCGCATG
AAGCCCTACTGTCCGTGTGAGCGCATGGACTCAGAGGATCTACTGTTCAT
CCTCTACACGTCGGGTTCGACTGGCACCCCGAAGGGCGTCGCGCACACCA
CTGCCGGCTACCTGCTGTACGCGGCCATGACCACGAAGCACGCATTTGGC
CTGAAGGAGGGAGATATATTCGCCTGCGTTGCCGACATCGGCTGGATCAC
CGGGCATTCCTACATCGTCTACGGCCCGCTGGTCAACGGAGCAACCTCGC
TCATGTTTGAGTCCACGCCCATGTACCCCAACCACGGCAGGATCTACTGT
TCATCCTCTACACGTCGGGTTCGACTGGCACCCCGAAGGGCGTCGCGCAC
ACCACTGCCGGCTACCTGCTGTACGCGGCCATGACCACGAAGCACGCATT
TGGCCTGAAGGAGGGAGATATATTCGCCTGCGTTGCCGACATCGGCTGGA
TCACCGGGCATTCCTACATCGTCTACGGCCCGCTGGTCAACGGAGCAACC
TCGCTCATGTTTGAGTCCACGCCCATGTACCCCAACCACGGCAGATACTG
GGACGTGGTGGAGAGGCACAAAGTGACACAGTTCTACACCGCCCCGACAG
CCATCCGGGCTCTCATGAGATTTGGGCCGGACATTATCTCCAACTATGAC
CTGAGCACGCTGCGGATCTTGGGATCGGTCGGAGAGCCGATCAATCCCGA
GGCCTGGCGTTGGTATTACGAGCACGTGCGTGACATACTGGGACGTGGTG
GAGAGGCACAAAGTGACACAGTTCTACACCGCCCCGACAGCCATCCGGGC
TCTCATGAGATTTGGGCCGGACATTATCTCCAACTATGACCTGAGCACGC
TGCGGATCTTGGGATCGGTCGGAGAGCCGATCAATCCCGAGGCCTGGCGT
TGGTATTACGAGCACGTGCGTGAC
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