mRNA_H-elongata_contig81817.15850.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: D7FHE5_ECTSI (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE5_ECTSI) HSP 1 Score: 196 bits (497), Expect = 7.000e-59 Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCV LYHQQLSYCIVQYVEKDP+TVMP+L+GLIRFWPWSCSSKQVLFLNELEDVLELLMDEQ+
Sbjct: 212 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQL 310
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: A0A6H5L4B6_9PHAE (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4B6_9PHAE) HSP 1 Score: 196 bits (497), Expect = 8.020e-59 Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCV LYHQQLSYCIVQYVEKDP+TVMP+L+GLIRFWPWSCSSKQVLFLNELEDVLELLMDEQ+
Sbjct: 232 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVSLYHQQLSYCIVQYVEKDPETVMPVLRGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQL 330
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: A0A835ZAF4_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF4_9STRA) HSP 1 Score: 184 bits (468), Expect = 8.940e-55 Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFAIPLKKEHL FLQ+ALIPLHKPK V +YHQQLSYCIVQYVEKDPDTV+P+L+GLIRFWPWSCS+KQVLFLNELED+LELLMDEQ+
Sbjct: 200 GELLEILGSIINGFAIPLKKEHLSFLQRALIPLHKPKNVHVYHQQLSYCIVQYVEKDPDTVVPVLRGLIRFWPWSCSAKQVLFLNELEDILELLMDEQL 298
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: A0A397DPI7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DPI7_9STRA) HSP 1 Score: 171 bits (432), Expect = 2.720e-50 Identity = 77/99 (77.78%), Postives = 91/99 (91.92%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFA+PLK+EHL FL KAL+PLHKPKCV LYHQQLSYCI QYVEKDPDT +PI+ G+++FWPW+CSSKQVLFLNELE++LEL+ +Q+
Sbjct: 70 GELLEILGSIINGFAMPLKREHLQFLVKALVPLHKPKCVSLYHQQLSYCITQYVEKDPDTAIPIISGIVKFWPWACSSKQVLFLNELEEILELMGPDQL 168
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: A0A6S9GHG6_HETAK (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GHG6_HETAK) HSP 1 Score: 172 bits (436), Expect = 6.260e-50 Identity = 78/99 (78.79%), Postives = 93/99 (93.94%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFAIPLKKEH+ FLQ+AL+PLHKPKCV +YHQQLSYC+VQYVEKD DT +P+L+GL+RFWPWSCS+KQV+FLNELE++LEL+ EQ+
Sbjct: 199 GELLEILGSIINGFAIPLKKEHVQFLQRALVPLHKPKCVAMYHQQLSYCVVQYVEKDADTGVPVLQGLVRFWPWSCSNKQVVFLNELEEILELVSAEQL 297
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: A0A5D6XXK9_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXK9_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.360e-48 Identity = 75/99 (75.76%), Postives = 92/99 (92.93%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFA+PLK EHL FL +AL+PLHKPKCV +YHQQLSYCI QYVEKDP+T +PI++G++RFWPWSCSSKQV+FLNELE++LEL+ ++Q+
Sbjct: 236 GELLEILGSIINGFAMPLKAEHLQFLVRALVPLHKPKCVSMYHQQLSYCITQYVEKDPETAVPIIQGILRFWPWSCSSKQVIFLNELEEILELMGNDQL 334
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: A0A7S2V448_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V448_9STRA) HSP 1 Score: 168 bits (426), Expect = 3.430e-48 Identity = 78/99 (78.79%), Postives = 92/99 (92.93%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFAIPLKKEH +FLQ+ALIPLHKPKCV +YHQQLSYCIVQYVEKD DT +P+L+GL+RFWPWS S+KQV+F+NELE++LEL+ EQ+
Sbjct: 240 GELLEILGSIINGFAIPLKKEHKVFLQRALIPLHKPKCVNMYHQQLSYCIVQYVEKDVDTAVPVLQGLVRFWPWSSSAKQVVFINELEEILELVGHEQL 338
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: A0A485LJQ3_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LJQ3_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.470e-48 Identity = 76/99 (76.77%), Postives = 91/99 (91.92%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFA+PLK+EHL FL KAL+PLHKPKCV LYHQQLSYCI QYVEKDP+T +PI+ G+++FWPW+CSSKQVLFLNELE++LEL+ +Q+
Sbjct: 274 GELLEILGSIINGFAMPLKREHLQFLVKALVPLHKPKCVSLYHQQLSYCITQYVEKDPETAIPIISGIVKFWPWACSSKQVLFLNELEEILELMGPDQL 372
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: K3XB75_GLOUD (Serine/threonine protein phosphatase 2A regulatory subunit n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB75_GLOUD) HSP 1 Score: 168 bits (425), Expect = 5.910e-48 Identity = 75/99 (75.76%), Postives = 91/99 (91.92%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFA+PLK EHL FL +AL+PLHKPKCV +YHQQLSYCI QYVEKDP+T +PI++G++RFWPWSCSSKQV+FLNELE++LEL+ +Q+
Sbjct: 248 GELLEILGSIINGFAMPLKAEHLQFLVRALVPLHKPKCVSMYHQQLSYCITQYVEKDPETAVPIIQGILRFWPWSCSSKQVIFLNELEEILELMGSDQL 346
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Match: A0A7S0GE31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GE31_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.010e-47 Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1
Query: 25 GELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYHQQLSYCIVQYVEKDPDTVMPILKGLIRFWPWSCSSKQVLFLNELEDVLELLMDEQV 321
GELLEILGSIINGFAIPLKKEHL FL +ALIPLHKPKCV LYHQQLSYCI+QYVEKD DT PIL G + WPWSCS KQVLFLNELE++LELL +Q+
Sbjct: 231 GELLEILGSIINGFAIPLKKEHLQFLVRALIPLHKPKCVGLYHQQLSYCIIQYVEKDADTATPILNGFFKCWPWSCSGKQVLFLNELEEILELLGADQL 329 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81817.15850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81817.15850.1 >prot_H-elongata_contig81817.15850.1 ID=prot_H-elongata_contig81817.15850.1|Name=mRNA_H-elongata_contig81817.15850.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp MHHLLLCTGELLEILGSIINGFAIPLKKEHLLFLQKALIPLHKPKCVPLYback to top mRNA from alignment at H-elongata_contig81817:749..2753+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81817.15850.1 ID=mRNA_H-elongata_contig81817.15850.1|Name=mRNA_H-elongata_contig81817.15850.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2005bp|location=Sequence derived from alignment at H-elongata_contig81817:749..2753+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81817:749..2753+ >mRNA_H-elongata_contig81817.15850.1 ID=mRNA_H-elongata_contig81817.15850.1|Name=mRNA_H-elongata_contig81817.15850.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=642bp|location=Sequence derived from alignment at H-elongata_contig81817:749..2753+ (Himanthalia elongata Himel1 dioecious)back to top |