prot_H-elongata_contig81784.15845.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81784.15845.1
Unique Nameprot_H-elongata_contig81784.15845.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: D7G3N5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N5_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 2.490e-116
Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 0
Query:    1 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            GCFACGTDNGFRIYNVDPFRETFRRVFSNGG+GIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRND GLVALCADASNMVLACPG+SRGHVNVELYDLRRSTLIPAHESELAQ+
Sbjct:   24 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGISRGHVNVELYDLRRSTLIPAHESELAQL 189          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: A0A6H5LNG1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNG1_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 1.170e-110
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0
Query:    1 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            GCFACGTDNGFRIYNVDPFRETFRRVFSNGG+GIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRND GLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQ+
Sbjct:   24 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGIGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDQGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQL 189          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: A0A835Z323_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z323_9STRA)

HSP 1 Score: 306 bits (784), Expect = 9.720e-101
Identity = 145/166 (87.35%), Postives = 159/166 (95.78%), Query Frame = 0
Query:    1 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            GCFACGTDNGFRIYNVDPFRETFRRVFS  GVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVV LA +IYVYRFSDL LLD+INTI+N++GL+ALC D+SNMVLACPG+SRGHVNVELYD R+STL+PAHES+LAQ+
Sbjct:   24 GCFACGTDNGFRIYNVDPFRETFRRVFS-AGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVALAHKIYVYRFSDLKLLDQINTIKNESGLLALCPDSSNMVLACPGISRGHVNVELYDTRKSTLVPAHESDLAQL 188          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: A0A4D9CZG2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZG2_9STRA)

HSP 1 Score: 286 bits (733), Expect = 2.420e-93
Identity = 133/166 (80.12%), Postives = 151/166 (90.96%), Query Frame = 0
Query:    1 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            GCFACGTDNGFRIYNVDPFRETFRR+F NGG+GIVEMLFR NL+ALVGGGRNPR+PPNKVMIWDDHQ+RC+GELSFRSEVKAV+LRRDRVVVVL  +IYVYRF DLHL D+++T+ N  GLVALC D +N VLACPG+++G V VELYD R+STLIPAHESELAQ+
Sbjct:   24 GCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALCPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQM 189          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: W7U6T1_9STRA (Wd repeat domain phosphoinositide-interacting protein 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6T1_9STRA)

HSP 1 Score: 283 bits (723), Expect = 5.200e-92
Identity = 132/166 (79.52%), Postives = 150/166 (90.36%), Query Frame = 0
Query:    1 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            GCFACGTDNGFRIYNVDPFRETFRR+F NGG+GIVEMLFR NL+ALVGGGRNPR+PPNKVMIWDDHQ+RC+GELSFRSEVKAV+LRRDRVVVVL  +IYVYRF DLHL D+++T+ N  GLVAL  D +N VLACPG+++G V VELYD R+STLIPAHESELAQ+
Sbjct:   24 GCFACGTDNGFRIYNVDPFRETFRRIFPNGGIGIVEMLFRTNLVALVGGGRNPRFPPNKVMIWDDHQNRCVGELSFRSEVKAVKLRRDRVVVVLTTKIYVYRFVDLHLQDQMSTLPNPRGLVALSPDNNNTVLACPGINKGSVRVELYDSRKSTLIPAHESELAQM 189          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: F0Y5R4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R4_AURAN)

HSP 1 Score: 276 bits (707), Expect = 3.870e-91
Identity = 131/162 (80.86%), Postives = 148/162 (91.36%), Query Frame = 0
Query:    5 CGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            CGT++GFRIYNVDPF+ETFRRVFS GGVG+VEMLFRCNLLALVGGGR+PRYPPNKVMIWDDHQ+RCIGELSFRS+VKAV+LRRDRVVVVLA ++YVYRFSDL LLD+INT  N  GLVALC   SN VLACPGV+RGHV VELYD R+ST+I AHES+LA++
Sbjct:    1 CGTESGFRIYNVDPFKETFRRVFSGGGVGVVEMLFRCNLLALVGGGRSPRYPPNKVMIWDDHQNRCIGELSFRSDVKAVKLRRDRVVVVLATKVYVYRFSDLKLLDQINTQPNPRGLVALCPHPSNNVLACPGVNRGHVRVELYDARKSTIITAHESDLARL 162          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: W2LG63_PHYPR (Uncharacterized protein n=12 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LG63_PHYPR)

HSP 1 Score: 273 bits (698), Expect = 2.250e-89
Identity = 128/166 (77.11%), Postives = 146/166 (87.95%), Query Frame = 0
Query:    1 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            GCFACGTD+GF+I+N DPF+ETF R FSNGG+GIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL  +IYVY FSDL L+D I TI N  GL ALC + SN VLACPGV+RG V +ELYDLR++TLI AHE+EL+Q+
Sbjct:   24 GCFACGTDSGFKIFNCDPFKETFHRDFSNGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFSDLKLVDHIETIANPKGLCALCPNPSNTVLACPGVTRGTVRIELYDLRKTTLITAHEAELSQI 189          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: A0A7S1C6E2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6E2_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.860e-89
Identity = 122/163 (74.85%), Postives = 144/163 (88.34%), Query Frame = 0
Query:    2 CFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELA 164
            CFACGTD GFRIYN DPF+ETFRR FS+GG+GIVEMLFRCN+LALVGGGRNPRYPP+KVMIWDDHQ+RCIGELSFRSEV+AV+LRRDRVVVVL  +IYVY F+DL L+D I T+ N  GL A+C  ++N VLACPG+ +GHV VELYD+R++TLIPAH+ +LA
Sbjct:   22 CFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILALVGGGRNPRYPPDKVMIWDDHQNRCIGELSFRSEVRAVKLRRDRVVVVLLNKIYVYNFADLELIDHIETVNNPLGLCAVCPSSTNTVLACPGLQKGHVRVELYDIRKTTLIPAHDGDLA 184          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: A0A067CH88_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CH88_SAPPC)

HSP 1 Score: 273 bits (699), Expect = 5.440e-89
Identity = 129/166 (77.71%), Postives = 146/166 (87.95%), Query Frame = 0
Query:    1 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            GCFACGTD GFRIYN DPF+ETFRR FS+GG+GIVEMLFRCN+LA+VGGGRNPRYPPNKVMIWDDHQSR IGELSFRSEVKAV+LRRDRVVVVL  +IYVY F+DL LLD I TI N  GLVALC  ++N VLACPGVSRG V +ELYD R++TLI AHE++L+Q+
Sbjct:   24 GCFACGTDTGFRIYNCDPFKETFRRDFSSGGIGIVEMLFRCNILAIVGGGRNPRYPPNKVMIWDDHQSRNIGELSFRSEVKAVKLRRDRVVVVLQNKIYVYNFADLKLLDHIETIANPKGLVALCPSSTNTVLACPGVSRGTVRIELYDQRKTTLITAHEADLSQM 189          
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Match: A0A7S3JWF9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWF9_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.330e-88
Identity = 126/166 (75.90%), Postives = 148/166 (89.16%), Query Frame = 0
Query:    1 GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGGRNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYVYRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDLRRSTLIPAHESELAQV 166
            GCFACGT++GFRIYNVDPF+ETFRR F  GG+GIVEMLFRCNLLALVGGG +PRYPPNKVMIWDDHQ+RCIGELSFRSEVKAV+LRRDRVVV LA ++YVYRFSDL LLD+I+T  N  GL ALCAD ++ VLACPGV++GHV +ELYD R+ST++ AHES+L ++
Sbjct:   30 GCFACGTESGFRIYNVDPFKETFRRAFRGGGIGIVEMLFRCNLLALVGGGSSPRYPPNKVMIWDDHQNRCIGELSFRSEVKAVKLRRDRVVVALATKVYVYRFSDLKLLDQISTQVNSRGLAALCADPAHNVLACPGVNKGHVRIELYDSRKSTIVAAHESDLCRL 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81784.15845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3N5_ECTSI2.490e-11697.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LNG1_9PHAE1.170e-11098.19Reverse transcriptase domain-containing protein n=... [more]
A0A835Z323_9STRA9.720e-10187.35WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A4D9CZG2_9STRA2.420e-9380.12Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U6T1_9STRA5.200e-9279.52Wd repeat domain phosphoinositide-interacting prot... [more]
F0Y5R4_AURAN3.870e-9180.86Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
W2LG63_PHYPR2.250e-8977.11Uncharacterized protein n=12 Tax=Phytophthora para... [more]
A0A7S1C6E2_9STRA3.860e-8974.85Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A067CH88_SAPPC5.440e-8977.71Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A7S3JWF9_9STRA1.330e-8875.90Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11227:SF49AUTOPHAGY-RELATED PROTEIN 18Acoord: 1..164
NoneNo IPR availablePANTHERPTHR11227WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATEDcoord: 1..164
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81784contigH-elongata_contig81784:697..2777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81784.15845.1mRNA_H-elongata_contig81784.15845.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81784 697..2777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81784.15845.1 ID=prot_H-elongata_contig81784.15845.1|Name=mRNA_H-elongata_contig81784.15845.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
GCFACGTDNGFRIYNVDPFRETFRRVFSNGGVGIVEMLFRCNLLALVGGG
RNPRYPPNKVMIWDDHQSRCIGELSFRSEVKAVRLRRDRVVVVLAQRIYV
YRFSDLHLLDRINTIRNDAGLVALCADASNMVLACPGVSRGHVNVELYDL
RRSTLIPAHESELAQV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf