prot_H-elongata_contig81736.15839.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81736.15839.1
Unique Nameprot_H-elongata_contig81736.15839.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
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BLAST of mRNA_H-elongata_contig81736.15839.1 vs. uniprot
Match: D8LM07_ECTSI (Inosine-adenosine-guanosine-nucleoside hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM07_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 8.280e-14
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0 
Query:    1 MSGGHLLERD-KQFFAWDLVTVVQLVHPELFTIEELECDIVSEGVSQGRIVRCA 53
            ++G HLLE + + FFAWDL+TV QLVHPELFT  ++ECD+V  G SQGR VR A
Sbjct:  254 LAGAHLLETETRPFFAWDLLTVAQLVHPELFTTSQVECDVVVGGASQGRTVRTA 307
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BLAST of mRNA_H-elongata_contig81736.15839.1 vs. uniprot
Match: A0A6H5JPH9_9PHAE (IU_nuc_hydro domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH9_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 8.430e-14
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0 
Query:    1 MSGGHLLE-RDKQFFAWDLVTVVQLVHPELFTIEELECDIVSEGVSQGRIVRCA 53
            ++G HLLE + + FFAWDL+TV QLVHPELFT  ++ECD+V  G SQGR VR A
Sbjct:  266 LAGAHLLETKTRPFFAWDLLTVAQLVHPELFTTSQVECDVVIGGASQGRTVRTA 319
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BLAST of mRNA_H-elongata_contig81736.15839.1 vs. uniprot
Match: A0A2H5Y478_9CHLR (Pyrimidine-specific ribonucleoside hydrolase RihA n=1 Tax=Candidatus Thermoflexus japonica TaxID=2035417 RepID=A0A2H5Y478_9CHLR)

HSP 1 Score: 49.3 bits (116), Expect = 3.190e-5
Identity = 24/51 (47.06%), Postives = 31/51 (60.78%), Query Frame = 0 
Query:   12 QFFAWDLVTVVQLVHPELFTIEELECDIVSEGVSQGRIVRCAGERNKSSWI 62
            ++  WD+VT V L  PELFT EE E  + +EG  QGRI+R  G R    W+
Sbjct:  242 RYCMWDVVTTVWLARPELFTFEETEIAVHTEGPGQGRIIRQPGGRRV--WV 290
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81736.15839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM07_ECTSI8.280e-1462.96Inosine-adenosine-guanosine-nucleoside hydrolase n... [more]
A0A6H5JPH9_9PHAE8.430e-1462.96IU_nuc_hydro domain-containing protein n=1 Tax=Ect... [more]
A0A2H5Y478_9CHLR3.190e-547.06Pyrimidine-specific ribonucleoside hydrolase RihA ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036452Ribonucleoside hydrolase-likeGENE3D3.90.245.10coord: 3..61
e-value: 8.8E-7
score: 30.5
IPR036452Ribonucleoside hydrolase-likeSUPERFAMILY53590Nucleoside hydrolasecoord: 11..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81736contigH-elongata_contig81736:2493..2681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81736.15839.1mRNA_H-elongata_contig81736.15839.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81736 2493..2681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81736.15839.1 ID=prot_H-elongata_contig81736.15839.1|Name=mRNA_H-elongata_contig81736.15839.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MSGGHLLERDKQFFAWDLVTVVQLVHPELFTIEELECDIVSEGVSQGRIV
RCAGERNKSSWI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036452Ribo_hydro-like