prot_H-elongata_contig81657.15833.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81657.15833.1
Unique Nameprot_H-elongata_contig81657.15833.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
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BLAST of mRNA_H-elongata_contig81657.15833.1 vs. uniprot
Match: D8LLH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH8_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 5.150e-25
Identity = 52/91 (57.14%), Postives = 69/91 (75.82%), Query Frame = 0 
Query:    3 IASRRAAGQRTHDLSERATAALDSPSTGVWLQLLGEVQRRTQASEDDVIARCEAIRRRESELFRLASAKASAFFQGLARSVGHSDDQWAIP 93
            + SRRAAGQRT++L E A A L+SP T +W+Q+LGEVQRRT+    DV+ RCE++RRRE+E FR  S + + F Q LA +VG SD+QWA+P
Sbjct:  270 VNSRRAAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVSDVVLRCESVRRREAERFRHVSGQTNTFLQDLAAAVGCSDNQWAVP 360
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BLAST of mRNA_H-elongata_contig81657.15833.1 vs. uniprot
Match: A0A6H5JU58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU58_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 1.310e-24
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 0 
Query:    3 IASRRAAGQRTHDLSERATAALDSPSTGVWLQLLGEVQRRTQASEDDVIARCEAIRRRESELFRLASAKASAFFQGLARSVGHSDDQWAIP 93
            + SRRAAGQRT++L E A A L+SP T +W+Q+LGEVQRRT+    DV+ RCE++RRRE+E FR  S + + F   LA +VG SD+QWA+P
Sbjct:  354 VTSRRAAGQRTNELLESAVATLNSPGTRMWVQVLGEVQRRTEGKVSDVVLRCESVRRREAERFRHVSGQTNTFLHDLAAAVGCSDNQWAVP 444
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81657.15833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLH8_ECTSI5.150e-2557.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU58_9PHAE1.310e-2456.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81657contigH-elongata_contig81657:2..558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81657.15833.1mRNA_H-elongata_contig81657.15833.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81657 2..560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81657.15833.1 ID=prot_H-elongata_contig81657.15833.1|Name=mRNA_H-elongata_contig81657.15833.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
ENIASRRAAGQRTHDLSERATAALDSPSTGVWLQLLGEVQRRTQASEDDV
IARCEAIRRRESELFRLASAKASAFFQGLARSVGHSDDQWAIPHRIERPP
AVREARIGEAAARSDTNRDKKS
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