prot_H-elongata_contig8165.15832.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8165.15832.1
Unique Nameprot_H-elongata_contig8165.15832.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig8165.15832.1 vs. uniprot
Match: D7FGS8_ECTSI (Lactamase_B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGS8_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.160e-6
Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   18 MRVVCVPTLRDNFAYLLIDESGVTAVVDPAQPEKVRK 54
            M+V+ VP L DNFAYLL D +GVTA VDPA+ +KV K
Sbjct:    1 MKVIVVPVLDDNFAYLLSDAAGVTAAVDPAEADKVLK 37          
BLAST of mRNA_H-elongata_contig8165.15832.1 vs. uniprot
Match: A0A6V1NKM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NKM9_HETAK)

HSP 1 Score: 50.8 bits (120), Expect = 5.770e-6
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   18 MRVVCVPTLRDNFAYLLIDE-SGVTAVVDPAQPEKV 52
            M+VV VPTL DN+AYLLIDE +   A VDPA+PEKV
Sbjct:    1 MKVVPVPTLSDNYAYLLIDELTNTAAAVDPAEPEKV 36          
BLAST of mRNA_H-elongata_contig8165.15832.1 vs. uniprot
Match: A0A8J9R8P0_9CHLO (Hydroxyacylglutathione hydrolase, mitochondrial n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9R8P0_9CHLO)

HSP 1 Score: 50.1 bits (118), Expect = 1.100e-5
Identity = 19/34 (55.88%), Postives = 27/34 (79.41%), Query Frame = 0
Query:   18 MRVVCVPTLRDNFAYLLIDESGVTAVVDPAQPEK 51
            MR++ VP L DN++YLL+D +G+TA VDP +P K
Sbjct:    1 MRIIPVPMLSDNYSYLLVDNNGITAAVDPVEPAK 34          
BLAST of mRNA_H-elongata_contig8165.15832.1 vs. uniprot
Match: A0A139A1B0_GONPJ (Hydroxyacylglutathione hydrolase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A1B0_GONPJ)

HSP 1 Score: 49.7 bits (117), Expect = 1.530e-5
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 0
Query:   18 MRVVCVPTLRDNFAYLLIDE-SGVTAVVDPAQPEKV 52
            M+VV VP L DN+AYLLIDE +G +A VDP QPEK+
Sbjct:    1 MKVVPVPCLEDNYAYLLIDEKTGTSAFVDPVQPEKL 36          
BLAST of mRNA_H-elongata_contig8165.15832.1 vs. uniprot
Match: M2Y3W5_GALSU (Hydroxyacylglutathione hydrolase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y3W5_GALSU)

HSP 1 Score: 49.7 bits (117), Expect = 1.570e-5
Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 0
Query:   13 SFQPTMRVVCVPTLRDNFAYLLIDES-GVTAVVDPAQPEKV 52
            +  P  RVV +P L DN+AYLLID +  V A +DPA+PEKV
Sbjct:    5 ALSPIARVVTIPVLSDNYAYLLIDTTKNVAAAIDPAEPEKV 45          
BLAST of mRNA_H-elongata_contig8165.15832.1 vs. uniprot
Match: A0A1V9Z2C1_9STRA (Hydroxyacylglutathione hydrolase, mitochondrial-like isoform X2 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z2C1_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 3.300e-5
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    7 HQVSVFSFQPTMRVVCVPTLRDNFAYLLIDESGVTAV-VDPAQPEKV 52
              ++ ++   ++RVV VP L DN+AYLLID++  TA  +DP +P+KV
Sbjct: 1662 ENIADYAIMTSVRVVIVPVLNDNYAYLLIDQATATAAAIDPVEPQKV 1708          
BLAST of mRNA_H-elongata_contig8165.15832.1 vs. uniprot
Match: A0A7S2GMK4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GMK4_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 7.750e-5
Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 0
Query:    8 QVSVFSFQPTMRVVCVPTLRDNFAYLLIDES-GVTAVVDPAQPEKV 52
            Q+   S     RV+ +P L DN+AYL+ID S G  A VDPA+PEKV
Sbjct:    3 QIPCESTSHDTRVIPIPVLEDNYAYLIIDTSTGACACVDPAEPEKV 48          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8165.15832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FGS8_ECTSI1.160e-664.86Lactamase_B domain-containing protein n=2 Tax=Ecto... [more]
A0A6V1NKM9_HETAK5.770e-669.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J9R8P0_9CHLO1.100e-555.88Hydroxyacylglutathione hydrolase, mitochondrial n=... [more]
A0A139A1B0_GONPJ1.530e-566.67Hydroxyacylglutathione hydrolase n=1 Tax=Gonapodya... [more]
M2Y3W5_GALSU1.570e-556.10Hydroxyacylglutathione hydrolase n=1 Tax=Galdieria... [more]
A0A1V9Z2C1_9STRA3.300e-544.68Hydroxyacylglutathione hydrolase, mitochondrial-li... [more]
A0A7S2GMK4_9STRA7.750e-552.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeGENE3D3.60.15.10coord: 6..54
e-value: 3.2E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8165contigH-elongata_contig8165:9351..9515 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8165.15832.1mRNA_H-elongata_contig8165.15832.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8165 9351..9515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8165.15832.1 ID=prot_H-elongata_contig8165.15832.1|Name=mRNA_H-elongata_contig8165.15832.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
SVKRCCHQVSVFSFQPTMRVVCVPTLRDNFAYLLIDESGVTAVVDPAQPE
KVRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036866RibonucZ/Hydroxyglut_hydro