prot_H-elongata_contig81585.15826.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: A0A3R7D5H3_9STRA (Sm domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D5H3_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.670e-13 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNGKLGSAS 36
MNIAMEQT+E+VNGQLKA+YGDCFIRGNNGK S S
Sbjct: 39 MNIAMEQTQEFVNGQLKAQYGDCFIRGNNGKPSSLS 74
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: A0A7S2ATC3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATC3_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.120e-13 Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNGKLGSASK 37
MNIAMEQTEEYVNGQLKAKYGDCFIRGNN SAS+
Sbjct: 69 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISASR 105
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: A0A7R9YDM9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDM9_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 3.540e-13 Identity = 32/37 (86.49%), Postives = 32/37 (86.49%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNGKLGSASK 37
MNIAMEQTEEYVNGQLKAKYGDCFIRGNN SA K
Sbjct: 62 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISAQK 98
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: K3WM85_GLOUD (Sm domain-containing protein n=8 Tax=Oomycota TaxID=4762 RepID=K3WM85_GLOUD) HSP 1 Score: 65.5 bits (158), Expect = 6.440e-13 Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNGKLGSASK 37
MNIAMEQT+EYVNGQLKA+YGDCFIRGNN SASK
Sbjct: 45 MNIAMEQTQEYVNGQLKAQYGDCFIRGNNVLYISASK 81
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: A0A396ZXB9_9STRA (Sm domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZXB9_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 8.280e-13 Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNG 30
MNIAMEQT+EYVNGQLKA+YGDCFIRGNNG
Sbjct: 39 MNIAMEQTQEYVNGQLKAQYGDCFIRGNNG 68
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: A0A3Q0DVH0_CARSF (U6 snRNA-associated Sm-like protein LSm6 isoform X1 n=1 Tax=Carlito syrichta TaxID=1868482 RepID=A0A3Q0DVH0_CARSF) HSP 1 Score: 65.9 bits (159), Expect = 1.080e-12 Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNGKLGSASKGQRVGAE 44
MNIA+EQTEEYVNGQLK KYGD FIRGNNG + S +R G E
Sbjct: 41 MNIALEQTEEYVNGQLKNKYGDAFIRGNNGNMCCTSAHRREGCE 84
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: A0A836CMP0_9STRA (Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.100e-12 Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNN 29
MNIAMEQTEEYVNGQLKAKYGDCFIRGNN
Sbjct: 79 MNIAMEQTEEYVNGQLKAKYGDCFIRGNN 107
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: UPI0015D5FDA6 (U6 snRNA-associated Sm-like protein LSm6 isoform X1 n=1 Tax=Cygnus atratus TaxID=8868 RepID=UPI0015D5FDA6) HSP 1 Score: 64.7 bits (156), Expect = 1.510e-12 Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNGKL 32
MNIA+EQTEEYVNGQLK KYGD FIRGNNGKL
Sbjct: 41 MNIALEQTEEYVNGQLKNKYGDAFIRGNNGKL 72
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: A0A087SBF4_AUXPR (U6 snRNA-associated Sm-like protein LSm6 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SBF4_AUXPR) HSP 1 Score: 65.5 bits (158), Expect = 1.750e-12 Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNGKLGSA 35
MNIAMEQTEEYVNGQLK +YGDCFIRGNNG G A
Sbjct: 48 MNIAMEQTEEYVNGQLKNRYGDCFIRGNNGGRGWA 82
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Match: A0A0U9HK22_KLENI (U6 snRNA-associated Sm-like protein LSm6 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HK22_KLENI) HSP 1 Score: 64.3 bits (155), Expect = 1.750e-12 Identity = 31/39 (79.49%), Postives = 31/39 (79.49%), Query Frame = 0
Query: 1 MNIAMEQTEEYVNGQLKAKYGDCFIRGNNGKLGSASKGQ 39
MNIAMEQTEEYVNGQLK KYGDCFIRGNN S K Q
Sbjct: 41 MNIAMEQTEEYVNGQLKNKYGDCFIRGNNVLYISTQKSQ 79 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81585.15826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig81585.15826.1 ID=prot_H-elongata_contig81585.15826.1|Name=mRNA_H-elongata_contig81585.15826.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=45bpback to top |