prot_H-elongata_contig81449.15813.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81449.15813.1
Unique Nameprot_H-elongata_contig81449.15813.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig81449.15813.1 vs. uniprot
Match: A0A6H5KPC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC9_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 8.360e-12
Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    2 VINRSHQANFATLYVDGQKVVKKIVKPQEHIIFKGIPAEDGIRELLFSLPR 52
            V N S + NFA LYVDGQK+ +K V   + +IF+GIP E+GI+ELLFSLPR
Sbjct:   71 VRNNSGKGNFAQLYVDGQKIAEKYVPAGDSVIFEGIPTEEGIQELLFSLPR 121          
BLAST of mRNA_H-elongata_contig81449.15813.1 vs. uniprot
Match: D8LLM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM6_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 5.670e-9
Identity = 32/61 (52.46%), Postives = 39/61 (63.93%), Query Frame = 0
Query:    2 VINRSHQANFATLYVDGQK----------VVKKIVKPQEHIIFKGIPAEDGIRELLFSLPR 52
            V N S + NFA LYVDGQK          V +K V   + +IF+GIP E+GI+ELLFSLPR
Sbjct:   59 VRNNSGKGNFAQLYVDGQKGLATGADTTAVAEKYVPAGDSVIFEGIPTEEGIQELLFSLPR 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81449.15813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPC9_9PHAE8.360e-1260.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLM6_ECTSI5.670e-952.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81449contigH-elongata_contig81449:124..1063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81449.15813.1mRNA_H-elongata_contig81449.15813.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81449 124..1078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81449.15813.1 ID=prot_H-elongata_contig81449.15813.1|Name=mRNA_H-elongata_contig81449.15813.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
MVINRSHQANFATLYVDGQKVVKKIVKPQEHIIFKGIPAEDGIRELLFSL
PR
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