prot_H-elongata_contig81437.15812.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81437.15812.1
Unique Nameprot_H-elongata_contig81437.15812.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length304
Homology
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BLAST of mRNA_H-elongata_contig81437.15812.1 vs. uniprot
Match: D7G703_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G703_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 4.190e-46
Identity = 136/314 (43.31%), Postives = 173/314 (55.10%), Query Frame = 0 
Query:    1 DAEAAFKKLATAFEKLVDPAQQAACLAESS-RKRARPDK-RGGTGRAGRTSEEGWRPGGEERTEPR----------RWCKEGENGPKEKTGKESTPDAAGQKRPIQEFMDDFAQQEVLFKEQVAQRAERLAERKRAKEEARAAADQERVDRLRENILGGPAGEEAAFEAKTASWQSFASVAARRRSNLAPRASPGEKKSRRVGAGRKGGGGRDSACAKDPSV-EENTREGDDWSKGDVADAASEAGTTSLGRGSGAQKRSRATEDDGPAREHGAGVVFACLVCRRGFKSAEGLARHEAQSELHRMNVQLSEVLS 301
            DAEAAFKKL  AFEKL DPAQQA C AE+  R R RP K RG +   GR SE     GG E +  R          RWC+EGE  P+ +  +E  PD  G+ RP+ EF+++F Q+E  FKE+VA+  E  AER      AR+  +QER++RLR+++LG    E    EAKTASW  F S            A   EK  R+     KG     + C++  +   E +  G +  +GDV D         L +G GA   +  + D   A E  AG  FAC VCRRGFKSA+GLA+HEA+SELH +NVQL E LS
Sbjct:   25 DAEAAFKKLTAAFEKLHDPAQQALCRAEAEQRNRGRPRKHRGDSSSGGRPSESRHEYGGGETSSARSGGNGPAEAPRWCREGEYVPEAERKREEGPDT-GKTRPMDEFLEEFEQREKAFKEEVARAKETNAERXXXXXXARSVQEQERMNRLRDDVLGSDGSE---VEAKTASWLKFNSTTXXXXXXXXXXAGRREKAKRKNS---KGVCSPVATCSQRQAYGAEGSGSGVEGREGDVGD---------LKKGGGADAAAGRSGDSSVAGEKAAGSGFACWVCRRGFKSAKGLAQHEAKSELHAINVQLREFLS 322
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81437.15812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G703_ECTSI4.190e-4643.31Heat shock protein 40 like protein/ DnaJ domain co... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 108..143
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 265..290
score: 8.642

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81437contigH-elongata_contig81437:61..2210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81437.15812.1mRNA_H-elongata_contig81437.15812.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81437 61..2210 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81437.15812.1 ID=prot_H-elongata_contig81437.15812.1|Name=mRNA_H-elongata_contig81437.15812.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=304bp
DAEAAFKKLATAFEKLVDPAQQAACLAESSRKRARPDKRGGTGRAGRTSE
EGWRPGGEERTEPRRWCKEGENGPKEKTGKESTPDAAGQKRPIQEFMDDF
AQQEVLFKEQVAQRAERLAERKRAKEEARAAADQERVDRLRENILGGPAG
EEAAFEAKTASWQSFASVAARRRSNLAPRASPGEKKSRRVGAGRKGGGGR
DSACAKDPSVEENTREGDDWSKGDVADAASEAGTTSLGRGSGAQKRSRAT
EDDGPAREHGAGVVFACLVCRRGFKSAEGLARHEAQSELHRMNVQLSEVL
SKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type