prot_H-elongata_contig81434.15810.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81434.15810.1
Unique Nameprot_H-elongata_contig81434.15810.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
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BLAST of mRNA_H-elongata_contig81434.15810.1 vs. uniprot
Match: A0A6H5KX61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX61_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.480e-18
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0 
Query:   60 VAAVTYAWCLHAYLLTRDGARQLVSRMPVSAPADIFVASFLTGTDSGRPVLAGRAVLPAI 119
            VA VT+AW LHAYLLTR  A +L + +PVSAPADIFVAS LT TDSGRPVLAGRAVLPA+
Sbjct:  394 VAPVTFAWGLHAYLLTRPAAARLANSLPVSAPADIFVASMLTSTDSGRPVLAGRAVLPAL 453
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BLAST of mRNA_H-elongata_contig81434.15810.1 vs. uniprot
Match: D8LCR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCR1_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.140e-18
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0 
Query:   60 VAAVTYAWCLHAYLLTRDGARQLVSRMPVSAPADIFVASFLTGTDSGRPVLAGRAVLPAI 119
            VA VT+AW LHAYLLTR  A +L + +PVSAPADIFVAS LT TDSGRPVLAGRAVLPA+
Sbjct:  967 VAPVTFAWGLHAYLLTRPAATRLSNSLPVSAPADIFVASMLTSTDSGRPVLAGRAVLPAL 1026
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81434.15810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KX61_9PHAE1.480e-1876.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCR1_ECTSI3.140e-1876.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81434contigH-elongata_contig81434:1235..1636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81434.15810.1mRNA_H-elongata_contig81434.15810.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81434 1235..1651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81434.15810.1 ID=prot_H-elongata_contig81434.15810.1|Name=mRNA_H-elongata_contig81434.15810.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MVGIAHAQAKAEKSAATHGNVPENVPPEEDSRDTGDEPSANDATGAATAT
TVAAKKSIKVAAVTYAWCLHAYLLTRDGARQLVSRMPVSAPADIFVASFL
TGTDSGRPVLAGRAVLPAIVKAPQGKGDVESLVA
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