prot_H-elongata_contig12058.1579.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12058.1579.1
Unique Nameprot_H-elongata_contig12058.1579.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length399
Homology
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A6H5KD26_9PHAE (Nuclear transcription factor Y subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD26_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 4.020e-50
Identity = 90/98 (91.84%), Postives = 96/98 (97.96%), Query Frame = 0
Query:  194 QYPIYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEGATAP 291
            QYP++SR+ALPTDQVTEDPPTYVNAKQYRRI+KRREARAKLEARRKVAPQRK+FLHKSRHDHA RRVRGPGGRFLTKAEL +YRKQLEAQDPEGATAP
Sbjct:   69 QYPLFSRVALPTDQVTEDPPTYVNAKQYRRIMKRREARAKLEARRKVAPQRKTFLHKSRHDHAMRRVRGPGGRFLTKAELEQYRKQLEAQDPEGATAP 166          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: D7FQ09_ECTSI (Nuclear transcription factor Y subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ09_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 5.280e-44
Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 0
Query:  207 QVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEGATAPAKVAGPGK 299
            QVTEDPPTYVNAKQYRRI+KRREARAKLEARRKVAPQRK+FLHKSRHDHA RRVRGPGGRFLTKAEL +YRKQLEAQDPEGATAPA   G GK
Sbjct:   34 QVTEDPPTYVNAKQYRRIMKRREARAKLEARRKVAPQRKTFLHKSRHDHAMRRVRGPGGRFLTKAELDQYRKQLEAQDPEGATAPAPQPGSGK 126          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A7R9U4I3_9STRA (Nuclear transcription factor Y subunit n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4I3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.830e-24
Identity = 61/102 (59.80%), Postives = 78/102 (76.47%), Query Frame = 0
Query:  177 AAIAQNPAAMMLMPYMAQYPIYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRK 278
            A + QN     L P  + YP+ S++ L   +++++ PTYVNAKQYRRI+KRR+ARAKLE++ K AP RK++LHKSRH+HACRR RGP GRFLTKAEL E RK
Sbjct:  126 AVVMQN----YLHPAQSMYPVASKVPL-NQEMSDEQPTYVNAKQYRRILKRRQARAKLESKWK-APSRKTYLHKSRHEHACRRPRGPSGRFLTKAELEELRK 221          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A835ZFN6_9STRA (Nuclear transcription factor Y subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFN6_9STRA)

HSP 1 Score: 113 bits (282), Expect = 3.480e-24
Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 0
Query:  177 AAIAQNPAAMMLMPYMAQYPIYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAEL 273
            A +   P  MML P M   P++ RM    +++ E+P TYVNAKQY+RI+KRREARAKLE RR++   RKSFLHKSRHDHACRR RGPGGRFLTKAEL
Sbjct:   58 AQMLSQPQMMMLSPLMFASPMF-RMPGAANELEENP-TYVNAKQYKRILKRREARAKLEERRRIPAARKSFLHKSRHDHACRRKRGPGGRFLTKAEL 152          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A433Q1P5_9FUNG (Transcriptional activator HAP2 n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433Q1P5_9FUNG)

HSP 1 Score: 106 bits (265), Expect = 1.720e-22
Identity = 65/120 (54.17%), Postives = 78/120 (65.00%), Query Frame = 0
Query:  178 AIAQNPAAMMLMPYMAQY--PIYSRMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQ----DPEGATAP 291
            A AQ    M L+P  AQ   P   R+ L  + VTED P YVNAKQY RI+KRR ARA+LE + KVA  RK +LH+SRH HA RR RGPGGRFLT AE+ E  KQ + +    D  G+T+P
Sbjct:  149 AYAQQYGQMPLIPGQAQVMNPALYRVPLSNEVVTEDEPLYVNAKQYHRILKRRAARARLEEQNKVAKTRKPYLHESRHKHAMRRPRGPGGRFLTAAEIAELDKQAKLEGKDGDENGSTSP 268          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A1V9ZVB7_9STRA (Nuclear transcription factor Y subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVB7_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.440e-21
Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 0
Query:  184 AAMMLMP--YMAQYPIYSRMALPTD-QVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQ 283
            + +MLMP  YM  +P++SRM LP   ++ E+ P YVNAKQY RI+ RR+ RAKLEA+     QRK+FLH SRH HA RR RGPGGRFLTK E+ +  ++  AQ
Sbjct:   42 SGLMLMPPTYMQSHPMFSRMPLPGGGEMVEEEPVYVNAKQYHRIMVRRQQRAKLEAKIGNTRQRKAFLHASRHKHAMRRPRGPGGRFLTKDEIAQLDREEAAQ 144          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A1Y1YW95_9FUNG (Transcriptional activator HAP2 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YW95_9FUNG)

HSP 1 Score: 95.5 bits (236), Expect = 1.280e-20
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 0
Query:  200 RMALPTDQVT--EDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPE 286
            R+ LP + VT  ED P YVNAKQY RI+KRR ARAKLE + ++   RK +LH+SRH HA RR RGPGGRFLT AE+ E  K+ E +  E
Sbjct:    3 RVPLPNEVVTAGEDDPLYVNAKQYHRILKRRAARAKLEEKHRIQKSRKPYLHESRHRHAMRRPRGPGGRFLTAAEIAELDKKKENESDE 91          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A075AQC5_ROZAC (Transcriptional activator HAP2 n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075AQC5_ROZAC)

HSP 1 Score: 96.3 bits (238), Expect = 1.510e-20
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 0
Query:  200 RMALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEG 287
            R+ALP   V E+ P YVNAKQY+RI+KRR ARAK EA RK + ++K +LH+SRH HA RR+RGPGGRFLT AE+ E +K+ + Q   G
Sbjct:   15 RVALPAT-VVEEEPMYVNAKQYQRILKRRIARAKYEAARKKSMEKKPYLHESRHKHAMRRLRGPGGRFLTAAEIAEMKKKEKEQSEAG 101          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A1Y1Y6R6_9FUNG (Transcriptional activator HAP2 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y6R6_9FUNG)

HSP 1 Score: 94.7 bits (234), Expect = 3.000e-20
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 0
Query:  200 RMALPTDQVT--EDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEG 287
            R+ LP++ V+  E+ P YVNAKQY RI+KRR ARAKLE R ++   RK +LH+SRH HA RR RGPGGRFLT AE+ E  K  E ++ +G
Sbjct:    3 RVPLPSEVVSTGEEEPLYVNAKQYHRILKRRAARAKLEERNRIQRNRKPYLHESRHRHAMRRPRGPGGRFLTAAEIAELDKNKENENDDG 92          
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Match: A0A7S1UIV2_9STRA (Nuclear transcription factor Y subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIV2_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.980e-20
Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 0
Query:  177 AAIAQNPAAMMLMPYMAQYPIYSR-MALPTDQ-VTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHKSRHDHACRRVRGPGGRFLTKAEL 273
            AA   NPA MM+  Y+    +Y     +P +Q V+++ PT+VNAKQYRRI+KRR ARAK+E + KV P RK++LHKSRH HACRR RGP GRFLTKAEL
Sbjct:  106 AAQGVNPA-MMMQGYLQPQQMYGAGYKVPLNQDVSDEQPTFVNAKQYRRILKRRAARAKMEEKYKV-PNRKAYLHKSRHQHACRRPRGPTGRFLTKAEL 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12058.1579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD26_9PHAE4.020e-5091.84Nuclear transcription factor Y subunit n=1 Tax=Ect... [more]
D7FQ09_ECTSI5.280e-4490.32Nuclear transcription factor Y subunit n=1 Tax=Ect... [more]
A0A7R9U4I3_9STRA1.830e-2459.80Nuclear transcription factor Y subunit n=2 Tax=Pin... [more]
A0A835ZFN6_9STRA3.480e-2464.95Nuclear transcription factor Y subunit n=1 Tax=Tri... [more]
A0A433Q1P5_9FUNG1.720e-2254.17Transcriptional activator HAP2 n=2 Tax=Jimgerdeman... [more]
A0A1V9ZVB7_9STRA1.440e-2155.34Nuclear transcription factor Y subunit n=1 Tax=Thr... [more]
A0A1Y1YW95_9FUNG1.280e-2058.43Transcriptional activator HAP2 n=1 Tax=Basidiobolu... [more]
A0A075AQC5_ROZAC1.510e-2059.09Transcriptional activator HAP2 n=1 Tax=Rozella all... [more]
A0A1Y1Y6R6_9FUNG3.000e-2056.67Transcriptional activator HAP2 n=1 Tax=Basidiobolu... [more]
A0A7S1UIV2_9STRA3.980e-2059.60Nuclear transcription factor Y subunit n=2 Tax=Pha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001289Nuclear transcription factor Y subunit APRINTSPR00616CCAATSUBUNTBcoord: 213..235
score: 75.36
coord: 244..267
score: 66.9
IPR001289Nuclear transcription factor Y subunit ASMARTSM00521cbf3coord: 209..270
e-value: 5.7E-28
score: 108.9
IPR001289Nuclear transcription factor Y subunit APFAMPF02045CBFB_NFYAcoord: 213..267
e-value: 1.9E-23
score: 82.8
IPR001289Nuclear transcription factor Y subunit APANTHERPTHR12632TRANSCRIPTION FACTOR NF-Y ALPHA-RELATEDcoord: 66..290
IPR001289Nuclear transcription factor Y subunit APROSITEPS51152NFYA_HAP2_2coord: 210..270
score: 30.844
NoneNo IPR availablePANTHERPTHR12632:SF6NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHAcoord: 66..290
IPR018362CCAAT-binding factor, conserved sitePROSITEPS00686NFYA_HAP2_1coord: 215..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12058contigH-elongata_contig12058:715..4519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12058.1579.1mRNA_H-elongata_contig12058.1579.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12058 672..4680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12058.1579.1 ID=prot_H-elongata_contig12058.1579.1|Name=mRNA_H-elongata_contig12058.1579.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=399bp
MDGAAQQDQRLPQPQLALQLPTPPPPAHEHNTKASPSSQVPGNQQSQSLL
TGLTNPSLQVGLPDTTQQKQQQPQEQQPPQEQSQSQSGLPIQMLQQGMAQ
SQTLFHQQAQQQGAGPLRHLGQQQQTGGPGIGAGVGGAATEGVDAVAEGQ
QQQQAHNLLAQAMSTQQQQQLMNMYMAAIAQNPAAMMLMPYMAQYPIYSR
MALPTDQVTEDPPTYVNAKQYRRIIKRREARAKLEARRKVAPQRKSFLHK
SRHDHACRRVRGPGGRFLTKAELTEYRKQLEAQDPEGATAPAKVAGPGKS
NSQPPPPAPRNLGSSTAVIAPVASKPASNPSVPVAPLNFVKEPGVVLMTG
PTPGGSEFSNASFVIPSPVDGGSSAGDVGVGHDAVAEHPSDKPPTDNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001289NFYA
IPR018362CCAAT-binding_factor_CS