prot_H-elongata_contig81405.15804.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig81405.15804.1
Unique Nameprot_H-elongata_contig81405.15804.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: D7FSQ0_ECTSI (VDE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ0_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.140e-40
Identity = 65/88 (73.86%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    1 FYISCVSRNVQVDPEDSPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR 88
            F+ + ++  +QVDP DSPRTFHTDGKLFGL+FKENWYVTGHST  G EFVFVQYRGHTLQGSY+GGFV++RKP+L  SA+ K+ARVAR
Sbjct:  205 FWENTITETLQVDPADSPRTFHTDGKLFGLSFKENWYVTGHSTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVARVAR 292          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: A0A6H5JEL1_9PHAE (VDE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL1_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 1.630e-38
Identity = 64/88 (72.73%), Postives = 77/88 (87.50%), Query Frame = 0
Query:    1 FYISCVSRNVQVDPEDSPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR 88
            F+ + ++  +QVDP DSPRTFHTDGKLFGL+FKENWYVTGHST  G EFVFVQYRGHTLQGSY+GGFV++RKP+L  SA+ K+A+VAR
Sbjct:  362 FWENTITETLQVDPADSPRTFHTDGKLFGLSFKENWYVTGHSTDPGEEFVFVQYRGHTLQGSYDGGFVYARKPYLPKSALAKVAKVAR 449          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: A0A835YUF5_9STRA (Violaxanthin de-epoxidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUF5_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.540e-27
Identity = 51/90 (56.67%), Postives = 70/90 (77.78%), Query Frame = 0
Query:    1 FYISCVSRNVQVDPEDSPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFL---AASAMPKIARVA 87
            F+ + +S  +++DP  +PRTFHT+GK+FGLTF+ENWYV     + GAEFV V+YRGHTLQG+Y+GGFV++R+P L   AA+A+   ARVA
Sbjct:  207 FWQNRLSERLEIDPPGAPRTFHTEGKMFGLTFRENWYVAAAGAEPGAEFVLVRYRGHTLQGTYDGGFVYAREPALPQRAAAAVRDAARVA 296          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: A0A7S3UV38_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV38_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 5.140e-20
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    1 FYISCVSRNVQVDPEDSPRTFHTDGKLFGLTFKENWYVTGHSTKVGAE---FVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR 88
            +Y + +S  + VDP  +PRT HT G++FGLTF ENWY+ G +     E   + FV Y GHTLQG+Y+G FV++++P   AS +P + R AR
Sbjct:   38 YYENNLSEEMVVDPPGAPRTLHTVGRMFGLTFWENWYIIGENDPGNPEEAPWKFVYYTGHTLQGNYKGAFVYAKEPAAPASILPGVQRAAR 128          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: A0A7S0INQ6_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0INQ6_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 1.150e-19
Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 0
Query:   17 SPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR 88
            S RT HT+GK+FGLTF ENWYV G ++K  A F FV Y G TLQ  YEG FV++RKP L A++MP I R+AR
Sbjct:  214 SRRTAHTEGKMFGLTFWENWYVIGENSKQEAPFKFVYYTGKTLQNRYEGAFVYARKPELPAASMPHIYRLAR 285          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: A0A7S0LH61_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LH61_9EUKA)

HSP 1 Score: 90.5 bits (223), Expect = 2.300e-19
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    1 FYISCVSRNVQVDPED-SPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR 88
            ++   +  N+  D +  S RT HT+GK+FGLTF ENWYV G ++K   +F FV Y G TLQ  YEG FV++RKP L A++MP I R+AR
Sbjct:  267 YFRQTLHENLVFDEQPGSRRTAHTEGKMFGLTFWENWYVIGENSKQEPQFKFVYYTGKTLQNRYEGAFVYARKPELPAASMPHIYRLAR 355          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: A0A7S3T481_9SPIT (Hypothetical protein n=3 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3T481_9SPIT)

HSP 1 Score: 87.4 bits (215), Expect = 2.690e-18
Identity = 43/72 (59.72%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   17 SPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR 88
            S RT HT+GK+FGLTF ENWYV G + +    F FV Y G TLQ  YEG FV++RKP L ASAMP I ++AR
Sbjct:  256 SHRTAHTEGKMFGLTFWENWYVIGTNDRSEDSFRFVYYTGKTLQNKYEGAFVYARKPELPASAMPHIYKLAR 327          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: R1DNE5_EMIHU (Violaxanthin de-epoxidase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNE5_EMIHU)

HSP 1 Score: 84.0 bits (206), Expect = 5.110e-17
Identity = 42/72 (58.33%), Postives = 49/72 (68.06%), Query Frame = 0
Query:   17 SPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR 88
            S RT HT+GK+FGLTF ENWYV G + +    F  V Y G TLQ  YEG FV++RKP L ASAMP I  +AR
Sbjct:  285 SHRTAHTEGKMFGLTFWENWYVIGANDRGEDAFRIVYYTGKTLQNKYEGAFVYARKPDLPASAMPHIYSIAR 356          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: A0A7S3APN8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3APN8_9EUKA)

HSP 1 Score: 82.8 bits (203), Expect = 1.320e-16
Identity = 41/72 (56.94%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   17 SPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR 88
            S RT HT+GK+FGLTF ENWYV G +     +F FV Y G TLQ  YEG FV+SR P L   AMP I ++AR
Sbjct:  293 SRRTAHTEGKMFGLTFWENWYVIGANKVNEPQFRFVYYTGKTLQNRYEGAFVYSRTPELPRDAMPSIYKIAR 364          
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Match: A0A7S2NZ74_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NZ74_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.780e-16
Identity = 40/90 (44.44%), Postives = 61/90 (67.78%), Query Frame = 0
Query:    1 FYISCVSRNVQVDPE---DSP--RTFHTDGKLFGLTFKENWYVTGHS--TKVGAEFVFVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKI 83
            F+ + ++ ++ VD     D+P  RT HT+GK++GL F ENWY+ G S  +K    F  V Y+GHTLQG+YEG FV++++P L A+A+P +
Sbjct:  155 FWENSLTEHMVVDAVSNGDNPTGRTMHTEGKMYGLKFNENWYIVGESDGSKDVPPFKLVAYKGHTLQGNYEGAFVYAKEPVLPAAAIPAV 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81405.15804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ0_ECTSI6.140e-4073.86VDE domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JEL1_9PHAE1.630e-3872.73VDE domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YUF5_9STRA3.540e-2756.67Violaxanthin de-epoxidase-domain-containing protei... [more]
A0A7S3UV38_HETAK5.140e-2046.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0INQ6_9EUKA1.150e-1961.11Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0LH61_9EUKA2.300e-1950.56Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S3T481_9SPIT2.690e-1859.72Hypothetical protein n=3 Tax=Choreotrichia TaxID=1... [more]
R1DNE5_EMIHU5.110e-1758.33Violaxanthin de-epoxidase n=2 Tax=Emiliania huxley... [more]
A0A7S3APN8_9EUKA1.320e-1656.94Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2NZ74_9STRA1.780e-1644.44Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 3..88
e-value: 9.4E-20
score: 73.1
IPR010788VDE lipocalin domainPFAMPF07137VDEcoord: 13..88
e-value: 1.1E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR33970FAMILY NOT NAMEDcoord: 9..88
NoneNo IPR availablePANTHERPTHR33970:SF1VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTICcoord: 9..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig81405contigH-elongata_contig81405:31..2716 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig81405.15804.1mRNA_H-elongata_contig81405.15804.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig81405 31..2716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig81405.15804.1 ID=prot_H-elongata_contig81405.15804.1|Name=mRNA_H-elongata_contig81405.15804.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
FYISCVSRNVQVDPEDSPRTFHTDGKLFGLTFKENWYVTGHSTKVGAEFV
FVQYRGHTLQGSYEGGFVFSRKPFLAASAMPKIARVAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR010788VDE