prot_H-elongata_contig8140.15802.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig8140.15802.1
Unique Nameprot_H-elongata_contig8140.15802.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length218
Homology
[Close]
BLAST of mRNA_H-elongata_contig8140.15802.1 vs. uniprot
Match: A0A6H5KD78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD78_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 4.070e-50
Identity = 108/204 (52.94%), Postives = 130/204 (63.73%), Query Frame = 0 
Query:    1 QVRLQCLVSSGRFVVPFRKINEAFEESMGVVEFDTVALGGEILLEVEGIYTCIGLSLVETFFHKKQQPLGIPGIVGPSAAEVRGGEELADIREPAERVSLDL---EAAWKK-AGPVCARKYVEEVTLRTSHQRES-SRQTSNNQRYFDEWARRERLEESPGRYCKPHSAPHFGEKGWTWAGYSERIRREQETKKAGEALKVDEE 199
            +VRLQC+ S G  VVP +KI +   ESMGVVEF TVALGGEILLE EGIYTCIGLSL+ETF+H +QQ           A  V G     ++R P    + +L    AAW   AG +CA KY  E T R S Q  S S  T+  Q+YFDEWARRERLE+S GRYC+PH  P +GE GWTWA +SER+ RE+      EA + +EE
Sbjct:   71 EVRLQCVASRGHVVVPAKKIGKDMSESMGVVEFHTVALGGEILLEAEGIYTCIGLSLIETFYHDEQQL---------QAPVVPGRHNKDEVRIPHTMAAAELAPLRAAWDDGAGTLCAEKYSSEATRRGSLQAMSPSSTTAQEQKYFDEWARRERLEDSVGRYCRPHRPPRWGEPGWTWADHSERVLRER-----AEATRTEEE 260
[Close]
BLAST of mRNA_H-elongata_contig8140.15802.1 vs. uniprot
Match: D7G308_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G308_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 7.050e-28
Identity = 77/160 (48.12%), Postives = 97/160 (60.62%), Query Frame = 0 
Query:   50 YTCIGLSLVETFFHKKQQPLGIPGIVGPSAAEVRGGEELADIREPAERVSL-DLEAAWKK-AGPVCARKYVEEVTLRTSHQRES-SRQTSNNQRYFDEWARRERLEESPGRYCKPHSAPHFGEKGWTWAGYSERIRREQETKKAGEALKVDEEKSKAQYA 206
            YTCIGLSL+ETF+H +QQ L  P + G      R  ++ A +        L  L AAW   AG +CA KY  E T R S Q  S S  T+ +Q+YFDEWARRERLE+S GRYC+PH  P +GE GWTWA +SER+ RE    +A    K +E K++ Q A
Sbjct:  152 YTCIGLSLIETFYHDEQQ-LQAPVVPG------RHNKDEARLPHTMAAAELAPLRAAWDDGAGALCAEKYSSEATRRGSLQAVSTSSTTAQDQKYFDEWARRERLEDSAGRYCRPHRPPRWGEPGWTWADHSERVLRE----RAEATRKEEENKARRQEA 300
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8140.15802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KD78_9PHAE4.070e-5052.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G308_ECTSI7.050e-2848.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8140contigH-elongata_contig8140:8448..9550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8140.15802.1mRNA_H-elongata_contig8140.15802.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig8140 8448..9550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig8140.15802.1 ID=prot_H-elongata_contig8140.15802.1|Name=mRNA_H-elongata_contig8140.15802.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp
QVRLQCLVSSGRFVVPFRKINEAFEESMGVVEFDTVALGGEILLEVEGIY
TCIGLSLVETFFHKKQQPLGIPGIVGPSAAEVRGGEELADIREPAERVSL
DLEAAWKKAGPVCARKYVEEVTLRTSHQRESSRQTSNNQRYFDEWARRER
LEESPGRYCKPHSAPHFGEKGWTWAGYSERIRREQETKKAGEALKVDEEK
SKAQYAVMKVGYVRTAY*
back to top