mRNA_H-elongata_contig10184.158.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10184.158.1
Unique NamemRNA_H-elongata_contig10184.158.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A6H5L4E7_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4E7_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 4.980e-51
Identity = 80/99 (80.81%), Postives = 91/99 (91.92%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQGVGN HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE EAR++MFKLHLGDT NTLTD +++ L ++++GCSGSDISVITREALMEPLRKCQ AK
Sbjct:  188 MQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEPEARSIMFKLHLGDTANTLTDQNFETLGDKAEGCSGSDISVITREALMEPLRKCQTAK 286
[Close]
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A836CL36_9STRA (Katanin like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL36_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.310e-49
Identity = 83/99 (83.84%), Postives = 90/99 (90.91%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQGVGN HDGLLVL ATNVPWELDPAMRRRFEKR+YIPLPEA ARA MF++HLGDT+NTL+D +Y  L E S+GCSGSDISVITREALMEPLRKCQAAK
Sbjct:  258 MQGVGNTHDGLLVLGATNVPWELDPAMRRRFEKRIYIPLPEAPARANMFQIHLGDTSNTLSDHNYSELGELSEGCSGSDISVITREALMEPLRKCQAAK 356
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A397EB65_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EB65_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.640e-46
Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQGVG+ HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE  AR VM K+HLGDT ++L D D+  LA +++GCSGSDISV+ REALMEPLR+CQ A+
Sbjct:   58 MQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVHARKVMLKIHLGDTPHSLNDADFTTLAAKAEGCSGSDISVLVREALMEPLRQCQQAQ 156
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A418AYC1_9STRA (MIT domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AYC1_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.940e-46
Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQGVG+ HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE EAR VM K+HLGDT ++L DDD+  LA +++GCSGSDISV+ REALMEPLR+CQ A+
Sbjct:  247 MQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPHSLNDDDFTTLATKAEGCSGSDISVLVREALMEPLRQCQQAQ 345
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: W2RG29_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2RG29_PHYPN)

HSP 1 Score: 160 bits (404), Expect = 6.210e-46
Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQG+GNKHDG+LVL ATNVPWELDPAMRRRFEKR+YIPLP+ EAR VM  +HLGDT N L+D ++ A+AE+++GCSGSDISV+ R+ALMEPLRKCQ A+
Sbjct:  251 MQGIGNKHDGVLVLGATNVPWELDPAMRRRFEKRIYIPLPDIEARKVMLGIHLGDTPNELSDSNFTAIAEKTEGCSGSDISVLVRDALMEPLRKCQQAQ 349
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: K3X3Z4_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X3Z4_GLOUD)

HSP 1 Score: 161 bits (408), Expect = 1.070e-45
Identity = 74/99 (74.75%), Postives = 89/99 (89.90%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQGVGN HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLP+A+AR VM  +HLGDT + LTD+++ A+AE+++GCSGSDISV+ REALMEPLRKCQ A+
Sbjct:  253 MQGVGNTHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPDADARKVMLNIHLGDTPHALTDENFTAIAEQTEGCSGSDISVLVREALMEPLRKCQQAQ 351
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A024TRV6_9STRA (Uncharacterized protein n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRV6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 2.850e-45
Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQGVG+ HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE EAR VM K+HLGDT ++L DDD+  LA +++GCSGSDISV+ REALMEPLR+CQ A+
Sbjct:  251 MQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVEARKVMLKIHLGDTPHSLNDDDFTTLATKAEGCSGSDISVLVREALMEPLRQCQQAQ 349
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A418BY99_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BY99_9STRA)

HSP 1 Score: 155 bits (392), Expect = 2.980e-45
Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQGVG+ HDG+LVL ATNVPWELDPAMRRRFEKR+YIPLPE  AR VM K+HLGDT ++L D D+  LA +++GCSGSDISV+ REALMEPLR+CQ A+
Sbjct:   58 MQGVGHSHDGILVLGATNVPWELDPAMRRRFEKRIYIPLPEVHARKVMLKIHLGDTPHSLNDADFTTLAAKAEGCSGSDISVLVREALMEPLRQCQQAQ 156
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: A0A024GGM2_9STRA (Vesicle-fusing ATPase n=5 Tax=Albugo TaxID=65356 RepID=A0A024GGM2_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.860e-45
Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQG+G  HDG+LVL ATNVPWELDPA+RRRFEKR+YIPLPEA+AR  M KLHLGDT + L DDDY  LA ++DGCSGSDISV+ REALMEPLRKCQ A+
Sbjct:  249 MQGIGTSHDGVLVLGATNVPWELDPAIRRRFEKRIYIPLPEAKARKEMLKLHLGDTPHALVDDDYKQLATQTDGCSGSDISVLVREALMEPLRKCQQAR 347
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BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Match: W2RI57_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RI57_PHYPN)

HSP 1 Score: 160 bits (404), Expect = 5.030e-45
Identity = 73/99 (73.74%), Postives = 88/99 (88.89%), Query Frame = 1 
Query:    1 MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFKLHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK 297
            MQG+GNKHDG+LVL ATNVPWELDPAMRRRFEKR+YIPLP+ EAR VM  +HLGDT N L+D ++ A+AE+++GCSGSDISV+ R+ALMEPLRKCQ A+
Sbjct:  251 MQGIGNKHDGVLVLGATNVPWELDPAMRRRFEKRIYIPLPDIEARKVMLGIHLGDTPNELSDSNFTAIAEKTEGCSGSDISVLVRDALMEPLRKCQQAQ 349
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10184.158.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4E7_9PHAE4.980e-5180.81AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CL36_9STRA1.310e-4983.84Katanin like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A397EB65_9STRA1.640e-4672.73Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A418AYC1_9STRA3.940e-4674.75MIT domain-containing protein n=1 Tax=Aphanomyces ... [more]
W2RG29_PHYPN6.210e-4673.74Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
K3X3Z4_GLOUD1.070e-4574.75Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A024TRV6_9STRA2.850e-4574.75Uncharacterized protein n=12 Tax=Saprolegniaceae T... [more]
A0A418BY99_9STRA2.980e-4572.73Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024GGM2_9STRA3.860e-4575.76Vesicle-fusing ATPase n=5 Tax=Albugo TaxID=65356 R... [more]
W2RI57_PHYPN5.030e-4573.74Uncharacterized protein n=1 Tax=Phytophthora paras... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10184contigH-elongata_contig10184:6958..8264 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.9
Seed ortholog evalue1.9e-41
Seed eggNOG ortholog2880.D7FR02
Preferred nameVPS4B
KEGG koko:K12196
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
GOsGO:0000070,GO:0000075,GO:0000166,GO:0000278,GO:0000280,GO:0000323,GO:0000819,GO:0000902,GO:0000904,GO:0000910,GO:0000916,GO:0000920,GO:0000922,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0002790,GO:0003002,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005771,GO:0005773,GO:0005774,GO:0005783,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0006508,GO:0006511,GO:0006605,GO:0006622,GO:0006623,GO:0006629,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006869,GO:0006886,GO:0006900,GO:0006906,GO:0006914,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007032,GO:0007033,GO:0007034,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007163,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007423,GO:0007610,GO:0007638,GO:0008022,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008333,GO:0008593,GO:0009056,GO:0009057,GO:0009306,GO:0009405,GO:0009506,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009838,GO:0009887,GO:0009888,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010008,GO:0010026,GO:0010033,GO:0010035,GO:0010038,GO:0010090,GO:0010091,GO:0010226,GO:0010256,GO:0010389,GO:0010564,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010824,GO:0010825,GO:0010876,GO:0010941,GO:0010948,GO:0010971,GO:0010972,GO:0012505,GO:0015031,GO:0015630,GO:0015672,GO:0015833,GO:0015850,GO:0015918,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016125,GO:0016192,GO:0016197,GO:0016236,GO:0016322,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017048,GO:0017076,GO:0017111,GO:0017157,GO:0019058,GO:0019068,GO:0019076,GO:0019538,GO:0019899,GO:0019904,GO:0019941,GO:0021700,GO:0022008,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030001,GO:0030029,GO:0030036,GO:0030054,GO:0030154,GO:0030163,GO:0030182,GO:0030301,GO:0030447,GO:0030448,GO:0030496,GO:0030554,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031267,GO:0031410,GO:0031468,GO:0031982,GO:0032365,GO:0032366,GO:0032367,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032506,GO:0032507,GO:0032509,GO:0032510,GO:0032511,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032886,GO:0032940,GO:0032984,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033993,GO:0034058,GO:0034067,GO:0034613,GO:0035088,GO:0035418,GO:0035639,GO:0035890,GO:0035891,GO:0036094,GO:0036213,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042051,GO:0042058,GO:0042221,GO:0042461,GO:0042462,GO:0042551,GO:0042592,GO:0042623,GO:0042802,GO:0042803,GO:0042886,GO:0043162,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043328,GO:0043624,GO:0043632,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044837,GO:0044878,GO:0045053,GO:0045184,GO:0045185,GO:0045197,GO:0045324,GO:0045463,GO:0045465,GO:0045470,GO:0045742,GO:0045746,GO:0045786,GO:0045787,GO:0045920,GO:0045921,GO:0045926,GO:0045930,GO:0045931,GO:0046530,GO:0046599,GO:0046601,GO:0046605,GO:0046607,GO:0046755,GO:0046903,GO:0046907,GO:0046983,GO:0048284,GO:0048285,GO:0048468,GO:0048469,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048666,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0048878,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050801,GO:0050896,GO:0051020,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051259,GO:0051260,GO:0051261,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051493,GO:0051495,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051651,GO:0051656,GO:0051701,GO:0051704,GO:0051716,GO:0051726,GO:0051782,GO:0051783,GO:0052126,GO:0052192,GO:0055044,GO:0055065,GO:0055067,GO:0055075,GO:0055078,GO:0055080,GO:0060236,GO:0060341,GO:0060548,GO:0060627,GO:0061024,GO:0061025,GO:0061245,GO:0061462,GO:0061640,GO:0061738,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070507,GO:0070676,GO:0070727,GO:0070887,GO:0070925,GO:0071241,GO:0071248,GO:0071285,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072319,GO:0072594,GO:0072657,GO:0072665,GO:0072666,GO:0090068,GO:0090169,GO:0090174,GO:0090224,GO:0090543,GO:0090558,GO:0090596,GO:0090611,GO:0090626,GO:0097159,GO:0097352,GO:0097367,GO:0097708,GO:0098588,GO:0098771,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:1901184,GO:1901186,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901615,GO:1901673,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902115,GO:1902117,GO:1902186,GO:1902188,GO:1902494,GO:1902749,GO:1902750,GO:1902751,GO:1903047,GO:1903076,GO:1903530,GO:1903531,GO:1903532,GO:1903539,GO:1903541,GO:1903542,GO:1903543,GO:1903722,GO:1903724,GO:1903772,GO:1903774,GO:1903827,GO:1903900,GO:1903902,GO:1904375,GO:1904896,GO:1904903,GO:1904949,GO:1905475,GO:1990621,GO:1990778
EggNOG free text desc.positive regulation of centriole elongation
EggNOG OGsKOG0739@1,KOG0739@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative; katanin like protein
Ec32 orthologEc-09_003060.1
Exons3
Model size297
Cds size297
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10184.158.1prot_H-elongata_contig10184.158.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10184 6958..8264 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929557.7477355-CDS-H-elongata_contig10184:6957..70001622929557.7477355-CDS-H-elongata_contig10184:6957..7000Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10184 6958..7000 +
1691679069.2853968-CDS-H-elongata_contig10184:6957..70001691679069.2853968-CDS-H-elongata_contig10184:6957..7000Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10184 6958..7000 +
1622929557.7864103-CDS-H-elongata_contig10184:7580..77261622929557.7864103-CDS-H-elongata_contig10184:7580..7726Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10184 7581..7726 +
1691679069.3544564-CDS-H-elongata_contig10184:7580..77261691679069.3544564-CDS-H-elongata_contig10184:7580..7726Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10184 7581..7726 +
1622929557.8555508-CDS-H-elongata_contig10184:8156..82641622929557.8555508-CDS-H-elongata_contig10184:8156..8264Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10184 8157..8264 +
1691679069.36582-CDS-H-elongata_contig10184:8156..82641691679069.36582-CDS-H-elongata_contig10184:8156..8264Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10184 8157..8264 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10184.158.1

>prot_H-elongata_contig10184.158.1 ID=prot_H-elongata_contig10184.158.1|Name=mRNA_H-elongata_contig10184.158.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
MQGVGNKHDGLLVLAATNVPWELDPAMRRRFEKRVYIPLPEAEARAVMFK
LHLGDTTNTLTDDDYDALAERSDGCSGSDISVITREALMEPLRKCQAAK
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mRNA from alignment at H-elongata_contig10184:6958..8264+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10184.158.1 ID=mRNA_H-elongata_contig10184.158.1|Name=mRNA_H-elongata_contig10184.158.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1307bp|location=Sequence derived from alignment at H-elongata_contig10184:6958..8264+ (Himanthalia elongata Himel1 dioecious)
ATGCAGGGGGTGGGAAACAAGCACGATGGCCTGCTCGTGCTCGGTGAGCC
TTCGAGGTGTTTTAACGCTTTTACGGCAAAGGAGGAGGGGGGGTGTGGGA
GGCCGATCTTTTGTGAGGTTCAAATGGTCCTCGCAGTGTGACGCATCCTC
GCCGTGCGGCAGACAAGGAAATGGTACCTTGTGTAGAGTAGTGTTGTGCT
GTGTCAATACCTTCTCTACGGCTTGATGGACGATTTTCGATCCGCGTGCT
CCGATTCGTGGGTTGAACGATTCAGTCGGTCGGTCGGATACGATCCTGCG
ATGTCCATACTGACAGCGCCTTCCTGTTGTATCGTAGGGTGGATGACTGA
GCGCTATAAGATGCACGTGGTGTAATAAACACCATATCATCATATCATCT
CTATTAAGCGCTCGACGATGGCGACCCGTTCGTTCCGTGACGTGGGAGTT
GGACGGTCATCATTATTTTTTATAAGTCATGGAAGAGGCGTCTAAAAGCT
GCGATGTGACCGCGGTGTCCTTTTTGGACAGTTTCTCGGGTTTTTTTAGT
GAGTGCCCCCCCTGCAATGTGTGAGACGGAAGGGTTACGTACGACACTGC
CCTCCGTTTCCTTTTTTTTACAGCCGCGACGAACGTGCCGTGGGAGTTGG
ACCCTGCCATGCGAAGGCGTTTTGAAAAGCGAGTCTATATCCCTCTGCCG
GAGGCCGAAGCGCGGGCGGTCATGTTCAAGCTGCACCTTGGAGATACCAC
CAACACGCTGACAGATGATGTGGGTATCTCGTCCGTGAGGCAATAATACT
AGTTTAAAGAAACTATCCAATGGGTAGACGCATGCTACCCCCCCCACCCA
CTCCATGGAAGGCATTTTTTTCTCTGCGAGCTGATGCGATCGGTCGTTTG
TTGTTGGAATCTTGTTTACATTTGCCTCGATAATATCGTTCATATCCGAT
GGGAACCCCATGGGCTGCCTAGCCAGAGCAAGCGTTGTGTGGGCAGGCAT
CGCGGGCTAAAGACGGGGGCTCCAATCTGGCCAATCATTATAGTAATAGT
AAAGCTCGTTTCTCTCTATTAAAGCTACGACATCAATTACAGACATTTTT
TAAAGCTTCACCGGAGCCATTAAGATGGTCTTGCTAGACACTCGTCGCAT
TTTGAACACGCCCTAAATCGCCCCGGTCCCACGCCTTTCTCTCCATCAGG
ATTATGACGCGCTAGCGGAAAGATCGGACGGATGTTCTGGTTCGGATATA
TCTGTCATCACGCGCGAGGCGCTTATGGAACCGCTTCGGAAATGCCAGGC
TGCCAAG
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Coding sequence (CDS) from alignment at H-elongata_contig10184:6958..8264+

>mRNA_H-elongata_contig10184.158.1 ID=mRNA_H-elongata_contig10184.158.1|Name=mRNA_H-elongata_contig10184.158.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=594bp|location=Sequence derived from alignment at H-elongata_contig10184:6958..8264+ (Himanthalia elongata Himel1 dioecious)
ATGCAGGGGGTGGGAAACAAGCACGATGGCCTGCTCGTGCTCGATGCAGG
GGGTGGGAAACAAGCACGATGGCCTGCTCGTGCTCGCCGCGACGAACGTG
CCGTGGGAGTTGGACCCTGCCATGCGAAGGCGTTTTGAAAAGCGAGTCTA
TATCCCTCTGCCGGAGGCCGAAGCGCGGGCGGTCATGTTCAAGCTGCACC
TTGGAGATACCACCAACACGCTGACAGATGATCCGCGACGAACGTGCCGT
GGGAGTTGGACCCTGCCATGCGAAGGCGTTTTGAAAAGCGAGTCTATATC
CCTCTGCCGGAGGCCGAAGCGCGGGCGGTCATGTTCAAGCTGCACCTTGG
AGATACCACCAACACGCTGACAGATGATGATTATGACGCGCTAGCGGAAA
GATCGGACGGATGTTCTGGTTCGGATATATCTGTCATCACGCGCGAGGCG
CTTATGGAACCGCTTCGGAAATGCCAGGCTGCCAAGGATTATGACGCGCT
AGCGGAAAGATCGGACGGATGTTCTGGTTCGGATATATCTGTCATCACGC
GCGAGGCGCTTATGGAACCGCTTCGGAAATGCCAGGCTGCCAAG
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