mRNA_H-elongata_contig81329.15792.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: D8LG20_ECTSI (Peroxyredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG20_ECTSI) HSP 1 Score: 248 bits (632), Expect = 1.680e-77 Identity = 125/139 (89.93%), Postives = 128/139 (92.09%), Query Frame = 1
Query: 4 PQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
P DVPASEIF+GKKVVICGVPGAFTPTC DNHLPSFIA DKFKEKGVDTVACMSVNDAFVMSRWIKSLDA DKVTMLADGG VFAEESGL VKTGKFGG RLQRLAMIVNDGT+EKLF E GTGYTD SSGD+VLAAL
Sbjct: 67 PADVPASEIFAGKKVVICGVPGAFTPTCDDNHLPSFIANADKFKEKGVDTVACMSVNDAFVMSRWIKSLDAEDKVTMLADGGAVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDVSSGDTVLAAL 205
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: B7ZGN1_9PHAE (Peroxyredoxin n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN1_9PHAE) HSP 1 Score: 243 bits (620), Expect = 2.460e-76 Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = 1
Query: 4 PQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
P DVPA+++F+GKKVVICGVPGAFTPTCSD+HLPSFIAL D+FK KGVDTVAC+SVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGL VKTGKFGG RLQRLAMIVNDGT+EKLF E GTGYTD SSG VLAAL
Sbjct: 23 PADVPAADVFAGKKVVICGVPGAFTPTCSDDHLPSFIALADEFKAKGVDTVACLSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDLSSGAGVLAAL 161
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: A0A836CPD9_9STRA (Peroxyredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD9_9STRA) HSP 1 Score: 175 bits (443), Expect = 2.700e-49 Identity = 85/139 (61.15%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 4 PQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
P V A+++F+GKKVVICGVPGA TPTCS++H+P+FI D FK KGVDTVA +SVND FVMS W K L+ D + ML DG FA+ +GLN+ TG FGG+RL+R+AM+VNDG VEKL E G G+TD S S+LAAL
Sbjct: 62 PTPVSAADLFAGKKVVICGVPGAMTPTCSESHVPTFINAIDDFKAKGVDTVAVISVNDPFVMSAWGKKLEVGDSIMMLGDGSAAFAKSTGLNMDTGDFGGVRLKRMAMLVNDGVVEKLGVEDGGGFTDISDAKSILAAL 200
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: A0A7S2UXP0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP0_9STRA) HSP 1 Score: 173 bits (439), Expect = 9.960e-49 Identity = 82/139 (58.99%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 4 PQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
P ++PASE+F+GKKV ICG+PGAFTPTCS+ HLP FI + + K KGVDTV C+SVND FVM W K L A DKVTMLADGG FA+ +GL+ TG FGG RL+RL+M+V+DG + KL E G+ +TD SS +++L +
Sbjct: 59 PSELPASELFAGKKVAICGLPGAFTPTCSNTHLPGFIEVAEDIKAKGVDTVCCISVNDPFVMGAWGKQLGADDKVTMLADGGAAFAKATGLDFDTGSFGGTRLKRLSMLVDDGVISKLNVEDGSAFTDISSAETLLGQI 197
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: A0A7S2UXL6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXL6_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.130e-48 Identity = 82/139 (58.99%), Postives = 105/139 (75.54%), Query Frame = 1
Query: 4 PQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
P ++PASE+F+GKKV ICG+PGAFTPTCS+ HLP FI + + K KGVDTV C+SVND FVM W K L A DKVTMLADGG FA+ +GL+ TG FGG RL+RL+M+V+DG + KL E G+ +TD SS +++L +
Sbjct: 63 PSELPASELFAGKKVAICGLPGAFTPTCSNTHLPGFIEVAEDIKAKGVDTVCCISVNDPFVMGAWGKQLGADDKVTMLADGGAAFAKATGLDFDTGSFGGTRLKRLSMLVDDGVISKLNVEDGSAFTDISSAETLLGQI 201
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: A0A836CG28_9STRA (Peroxyredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG28_9STRA) HSP 1 Score: 160 bits (405), Expect = 3.430e-44 Identity = 81/139 (58.27%), Postives = 98/139 (70.50%), Query Frame = 1
Query: 4 PQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
P +VPA+++F+GKKV ICGVPGA TPTCS+ HLP FIA ++ K KGVDTVAC+SVND FVM W K L+ DKV MLADGG FA+ G T FGGIRL+RLAM+V DG V+KL E G + S ++L AL
Sbjct: 23 PTNVPAADLFAGKKVAICGVPGAMTPTCSEKHLPGFIAALEELKSKGVDTVACISVNDPFVMGAWGKKLECDDKVMMLADGGANFAKAIGHEFDTKDFGGIRLKRLAMLVKDGVVQKLGVEDGGAFEGASDVKTILEAL 161
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: A0A7S3NGM2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGM2_9STRA) HSP 1 Score: 155 bits (393), Expect = 5.050e-42 Identity = 75/139 (53.96%), Postives = 98/139 (70.50%), Query Frame = 1
Query: 4 PQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
P D+ S++F GK VV+ G+PGA TPTCS+N +P ++ +DKF EKGVDTVAC++VND FV S K +D K+ MLADG F + G++V TG FGGIR +R AMIV DG VE EGGTG+TD SS +++L+ L
Sbjct: 53 PSDLSYSDVFKGKTVVLFGIPGALTPTCSENQMPGYVENYDKFMEKGVDTVACLAVNDPFVTSAMSKKVDPDGKILMLADGAASFVKAVGIDVDTGNFGGIRSRRCAMIVKDGKVEVFGDEGGTGFTDISSAETMLSKL 191
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: A0A5S9IM09_9BACT (Glutathione-dependent peroxiredoxin n=1 Tax=Candidatus Uabimicrobium amorphum TaxID=2596890 RepID=A0A5S9IM09_9BACT) HSP 1 Score: 152 bits (384), Expect = 3.800e-41 Identity = 79/139 (56.83%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 4 PQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
PQ++ +++FSGKKVV+ VPGAFTPTCS+ HLP F+AL DK KEKGVDTVAC +VNDAF+M W KS A+ ++MLADG G FA+ G TG FGGIR R A++ NDG VE +F E +T SS ++VL AL
Sbjct: 21 PQNLSTNDVFSGKKVVVFAVPGAFTPTCSEQHLPGFVALCDKIKEKGVDTVACTAVNDAFIMDAWQKSR-GAENISMLADGSGQFAKAIGAEKDTGIFGGIRSNRYALVANDGVVEHVFVEEPGKFT-VSSAEAVLEAL 157
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: A0A5P1R945_9GAMM (Glutathione-dependent peroxiredoxin n=1 Tax=Neptunomonas concharum TaxID=1031538 RepID=A0A5P1R945_9GAMM) HSP 1 Score: 149 bits (377), Expect = 4.080e-40 Identity = 73/138 (52.90%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 7 QDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
+ +PA+E+F+GKKVV+ VPGAFTPTCS +HLP ++ L D K KGVD +AC+SVNDAFVM W + +A D +TMLADGGG F + GL ++TG FGG+R QR AM++ DG +++L+ E + + S ++VLAAL
Sbjct: 22 ETLPAAELFAGKKVVLFAVPGAFTPTCSAHHLPGYVVLADDIKAKGVDLIACLSVNDAFVMRAWGEQQNA-DAITMLADGGGAFTKAIGLEMETGDFGGLRSQRYAMVIEDGVIKQLYIEAPKQF-EVSKAEAVLAAL 157
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Match: A0A4D9D001_9STRA (Thioredoxin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D001_9STRA) HSP 1 Score: 149 bits (375), Expect = 9.940e-40 Identity = 70/137 (51.09%), Postives = 97/137 (70.80%), Query Frame = 1
Query: 10 DVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDTVACMSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLNVKTGKFGGIRLQRLAMIVNDGTVEKLFSEGGTGYTDKSSGDSVLAAL 420
D+ +++F KKVV+ GVPGAFTPTC++ H P ++A+++ FK KGVD + C++ ND FV S W KSLDA DK+++LADG FA+ GL V+TG FGG+RL R + +V DG+V+KL E G GYT S + +L L
Sbjct: 27 DLTGTDLFKSKKVVLFGVPGAFTPTCTNTHAPEYLAMYESFKAKGVDAIYCIASNDCFVTSAWAKSLDAGDKMSILADGDCSFAKLVGLTVETGGFGGLRLSRFSALVEDGSVKKLHLEEGGGYTGVSGAEQMLKDL 163 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig81329.15792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig81329.15792.1 >prot_H-elongata_contig81329.15792.1 ID=prot_H-elongata_contig81329.15792.1|Name=mRNA_H-elongata_contig81329.15792.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp APQDVPASEIFSGKKVVICGVPGAFTPTCSDNHLPSFIALHDKFKEKGVDback to top mRNA from alignment at H-elongata_contig81329:417..2414- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig81329.15792.1 ID=mRNA_H-elongata_contig81329.15792.1|Name=mRNA_H-elongata_contig81329.15792.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1998bp|location=Sequence derived from alignment at H-elongata_contig81329:417..2414- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig81329:417..2414- >mRNA_H-elongata_contig81329.15792.1 ID=mRNA_H-elongata_contig81329.15792.1|Name=mRNA_H-elongata_contig81329.15792.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=846bp|location=Sequence derived from alignment at H-elongata_contig81329:417..2414- (Himanthalia elongata Himel1 dioecious)back to top |